RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 GUCY2CP25092 1073 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 TRIM60Q495X7 471 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.29□□□□□ -0.6
FXR1-202ENST00000357559 E9PMD0 336 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 CA4P22748 312 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 ZNF711Q9Y462 761 aa11.29□□□□□ -0.6
FXR1-202ENST00000357559 NEK2P51955 445 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 GYS2P54840 703 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 PSMC5P62195 406 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 MRPS15P82914 257 aaKnown RBP11.28□□□□□ -0.6
FXR1-202ENST00000357559 PDXDC2PQ6P474 469 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 PHF21AQ96BD5 680 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 FMO2Q99518 471 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 TSC22D3Q99576 134 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 ADNPQ9H2P0 1102 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 NHEJ1Q9H9Q4 299 aaPredicted RBP11.28□□□□□ -0.6
FXR1-202ENST00000357559 LMBRD1Q9NUN5 540 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 PPP3CCP48454 512 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 AARSP49588 968 aaKnown RBP eCLIP11.28□□□□□ -0.6
FXR1-202ENST00000357559 DYNLL1P63167 89 aaKnown RBP11.28□□□□□ -0.6
FXR1-202ENST00000357559 THEM5Q8N1Q8 247 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 C6orf203Q9P0P8 240 aaPredicted RBP11.28□□□□□ -0.6
FXR1-202ENST00000357559 KDM1AO60341 852 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 CCNA1P78396 465 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 EFTUD2Q15029 972 aaKnown RBP eCLIP11.28□□□□□ -0.69e-7■■■□□ 18.5
FXR1-202ENST00000357559 PGBD3Q8N328 593 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 SEL1LQ9UBV2 794 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 SPDYE5A6NIY4 337 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 ZBTB7BO15156 539 aaPredicted RBP11.28□□□□□ -0.6
FXR1-202ENST00000357559 SKIP12755 728 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 CHRNDQ07001 517 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 SPDYE7PQ495Y7 208 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 FAM182BQ5T319 152 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 NUGGCQ68CJ6 796 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 TMEM161AQ9NX61 479 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.28□□□□□ -0.6
FXR1-202ENST00000357559 TSPOAP1O95153 1857 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 ADCY9O60503 1353 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 HNRNPCP07910 306 aaKnown RBP eCLIP11.28□□□□□ -0.6
FXR1-202ENST00000357559 ADORA1P30542 326 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 SPDYAQ5MJ70 313 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 PCDHA7Q9UN72 937 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 AURKCQ9UQB9 309 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 MAP3K1Q13233 1512 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 KDM5BQ9UGL1 1544 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 PGRMC1O00264 195 aaKnown RBP11.28□□□□□ -0.6
FXR1-202ENST00000357559 MOCS2O96007 188 aaPredicted RBP11.28□□□□□ -0.6
FXR1-202ENST00000357559 COPS2P61201 443 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 SCRN1Q12765 414 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 LRRC24Q50LG9 513 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 COBLL1Q53SF7 1204 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 ARHGAP18Q8N392 663 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 IQCDQ96DY2 449 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 ASIC4Q96FT7 647 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 OSBPL10Q9BXB5 764 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 RUBCNLQ9H714 662 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 SELENONQ9NZV5 590 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 SRGAP2O75044 1071 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 PWP1Q13610 501 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 MORF4L2Q15014 288 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 BEND6Q5SZJ8 279 aaPredicted RBP11.28□□□□□ -0.6
FXR1-202ENST00000357559 TEX9Q8N6V9 391 aa11.28□□□□□ -0.6
FXR1-202ENST00000357559 RNF103-CHMP3A0A140T963 221 aa11.27□□□□□ -0.6
FXR1-202ENST00000357559 F8W8V4 182 aa11.27□□□□□ -0.6
FXR1-202ENST00000357559 DDHD2O94830 711 aa11.27□□□□□ -0.6
FXR1-202ENST00000357559 MYBP10242 640 aa11.27□□□□□ -0.6
FXR1-202ENST00000357559 CYP27A1Q02318 531 aa11.27□□□□□ -0.6
FXR1-202ENST00000357559 SPATA1Q5VX52 437 aa11.27□□□□□ -0.6
FXR1-202ENST00000357559 ACAD11Q709F0 780 aa11.27□□□□□ -0.6
FXR1-202ENST00000357559 ADCK2Q7Z695 626 aa11.27□□□□□ -0.6
FXR1-202ENST00000357559 USE1Q9NZ43 259 aa11.27□□□□□ -0.6
FXR1-202ENST00000357559 DBNLQ9UJU6 430 aaKnown RBP11.27□□□□□ -0.6
FXR1-202ENST00000357559 BAG6P46379 1132 aa11.27□□□□□ -0.6
FXR1-202ENST00000357559 CAPZA2P47755 286 aa11.27□□□□□ -0.6
FXR1-202ENST00000357559 CENPUQ71F23 418 aa11.27□□□□□ -0.6
FXR1-202ENST00000357559 NUP93Q8N1F7 819 aa11.27□□□□□ -0.6
FXR1-202ENST00000357559 IP6K1Q92551 441 aa11.27□□□□□ -0.6
FXR1-202ENST00000357559 TRIM11Q96F44 468 aa11.27□□□□□ -0.6
FXR1-202ENST00000357559 MRPL47Q9HD33 250 aaKnown RBP11.27□□□□□ -0.6
FXR1-202ENST00000357559 IFT140Q96RY7 1462 aa11.27□□□□□ -0.61
FXR1-202ENST00000357559 UBXN8O00124 270 aa11.27□□□□□ -0.61
FXR1-202ENST00000357559 COPEO14579 308 aa11.27□□□□□ -0.61
FXR1-202ENST00000357559 TTLL1O95922 423 aa11.27□□□□□ -0.61
FXR1-202ENST00000357559 DDX42Q86XP3 938 aaKnown RBP eCLIP11.27□□□□□ -0.61
FXR1-202ENST00000357559 TBCKQ8TEA7 893 aa11.27□□□□□ -0.61
FXR1-202ENST00000357559 MAP10Q9P2G4 905 aa11.27□□□□□ -0.61
FXR1-202ENST00000357559 RASGRF2O14827 1237 aa11.27□□□□□ -0.61
FXR1-202ENST00000357559 ANKRD40Q6AI12 368 aa11.27□□□□□ -0.61
FXR1-202ENST00000357559 ERICH1Q86X53 443 aa11.27□□□□□ -0.61
FXR1-202ENST00000357559 TRIML1Q8N9V2 468 aa11.27□□□□□ -0.61
FXR1-202ENST00000357559 ZNF280CQ8ND82 737 aa11.27□□□□□ -0.61
FXR1-202ENST00000357559 PIGOQ8TEQ8 1089 aa11.27□□□□□ -0.61
FXR1-202ENST00000357559 YIPF3Q9GZM5 350 aa11.27□□□□□ -0.61
FXR1-202ENST00000357559 GIMAP4Q9NUV9 329 aa11.27□□□□□ -0.61
FXR1-202ENST00000357559 CACNA2D2Q9NY47 1150 aa11.27□□□□□ -0.61
FXR1-202ENST00000357559 PCDHA13Q9Y5I0 950 aa11.27□□□□□ -0.61
FXR1-202ENST00000357559 TSPY1Q01534 308 aa11.27□□□□□ -0.61
FXR1-202ENST00000357559 USP17L2Q6R6M4 530 aa11.27□□□□□ -0.61
FXR1-202ENST00000357559 BTNL9Q6UXG8 535 aa11.27□□□□□ -0.61
FXR1-202ENST00000357559 ARMCX2Q7L311 632 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms