RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 LARP4BQ92615 738 aaKnown RBP28.33■■■□□ 2.13
SSBP3-202ENST00000357475 CEP89Q96ST8 783 aa28.33■■■□□ 2.13
SSBP3-202ENST00000357475 TSEN34Q9BSV6 310 aaKnown RBP28.33■■■□□ 2.13
SSBP3-202ENST00000357475 NIFKQ9BYG3 293 aaKnown RBP28.33■■■□□ 2.13
SSBP3-202ENST00000357475 STK17AQ9UEE5 414 aa28.33■■■□□ 2.13
SSBP3-202ENST00000357475 A0A1W2PQ45 241 aaPredicted RBP28.32■■■□□ 2.12
SSBP3-202ENST00000357475 A0A1W2PQY0 241 aa28.32■■■□□ 2.12
SSBP3-202ENST00000357475 SSBP05455 408 aaKnown RBP eCLIP28.32■■■□□ 2.12
SSBP3-202ENST00000357475 XKR9Q5GH70 373 aa28.32■■■□□ 2.12
SSBP3-202ENST00000357475 BMP2KQ9NSY1 1161 aaPredicted RBP28.32■■■□□ 2.12
SSBP3-202ENST00000357475 DBR1Q9UK59 544 aaKnown RBP28.32■■■□□ 2.12
SSBP3-202ENST00000357475 PHF24Q9UPV7 400 aa28.32■■■□□ 2.12
SSBP3-202ENST00000357475 MOXD2PA6NHM9 499 aa28.31■■■□□ 2.12
SSBP3-202ENST00000357475 KBTBD13C9JR72 458 aa28.31■■■□□ 2.12
SSBP3-202ENST00000357475 SLFN14P0C7P3 912 aa28.31■■■□□ 2.12
SSBP3-202ENST00000357475 SMIM10L2AP0DMW4 78 aa28.31■■■□□ 2.12
SSBP3-202ENST00000357475 SMIM10L2BP0DMW5 78 aa28.31■■■□□ 2.12
SSBP3-202ENST00000357475 INSRRP14616 1297 aa28.31■■■□□ 2.12
SSBP3-202ENST00000357475 CASP1P29466 404 aa28.31■■■□□ 2.12
SSBP3-202ENST00000357475 TARBP2Q15633 366 aaKnown RBP28.31■■■□□ 2.12
SSBP3-202ENST00000357475 NBPF20Q3BBV1 942 aa28.31■■■□□ 2.12
SSBP3-202ENST00000357475 KRBA2Q6ZNG9 492 aa28.31■■■□□ 2.12
SSBP3-202ENST00000357475 DIS3LQ8TF46 1054 aaKnown RBP28.31■■■□□ 2.12
SSBP3-202ENST00000357475 FAM167AQ96KS9 214 aa28.31■■■□□ 2.12
SSBP3-202ENST00000357475 CEP170P1Q96L14 293 aa28.31■■■□□ 2.12
SSBP3-202ENST00000357475 CYP26B1Q9NR63 512 aa28.31■■■□□ 2.12
SSBP3-202ENST00000357475 NRBP2Q9NSY0 501 aa28.31■■■□□ 2.12
SSBP3-202ENST00000357475 ANKEF1Q9NU02 776 aa28.31■■■□□ 2.12
SSBP3-202ENST00000357475 MKI67P46013 3256 aaKnown RBP28.31■■■□□ 2.12
SSBP3-202ENST00000357475 IGBP1P78318 339 aa28.3■■■□□ 2.12
SSBP3-202ENST00000357475 SYT2Q8N9I0 419 aaPredicted RBP28.3■■■□□ 2.12
SSBP3-202ENST00000357475 RUSC1Q9BVN2 902 aa28.3■■■□□ 2.12
SSBP3-202ENST00000357475 TMEM106CQ9BVX2 250 aa28.3■■■□□ 2.12
SSBP3-202ENST00000357475 KATNAL1Q9BW62 490 aa28.3■■■□□ 2.12
SSBP3-202ENST00000357475 HBP1O60381 514 aa28.29■■■□□ 2.12
SSBP3-202ENST00000357475 XRCC6P12956 609 aaKnown RBP eCLIP28.29■■■□□ 2.121e-7■□□□□ 8.9
SSBP3-202ENST00000357475 AFMP43652 599 aa28.29■■■□□ 2.12
SSBP3-202ENST00000357475 OTUD6AQ7L8S5 288 aa28.29■■■□□ 2.12
SSBP3-202ENST00000357475 PAGE5Q96GU1 130 aa28.29■■■□□ 2.12
SSBP3-202ENST00000357475 SETD4Q9NVD3 440 aa28.29■■■□□ 2.12
SSBP3-202ENST00000357475 HDAC6Q9UBN7 1215 aa28.29■■■□□ 2.12
SSBP3-202ENST00000357475 NPHP3-ACAD11A0A0J9YXS1 232 aa28.28■■■□□ 2.12
SSBP3-202ENST00000357475 ARHGEF35A5YM69 484 aa28.28■■■□□ 2.12
SSBP3-202ENST00000357475 PPFIA1Q13136 1202 aa28.28■■■□□ 2.12
SSBP3-202ENST00000357475 ARSHQ5FYA8 562 aa28.28■■■□□ 2.12
SSBP3-202ENST00000357475 CNNM3Q8NE01 707 aa28.28■■■□□ 2.12
SSBP3-202ENST00000357475 VTI1AQ96AJ9 217 aa28.28■■■□□ 2.12
SSBP3-202ENST00000357475 POLD4Q9HCU8 107 aa28.28■■■□□ 2.12
SSBP3-202ENST00000357475 KBTBD4Q9NVX7 518 aa28.28■■■□□ 2.12
SSBP3-202ENST00000357475 EVPLQ92817 2033 aa28.28■■■□□ 2.12
SSBP3-202ENST00000357475 PRR29P0C7W0 189 aa28.28■■■□□ 2.12
SSBP3-202ENST00000357475 ZNF200P98182 395 aaPredicted RBP28.28■■■□□ 2.12
SSBP3-202ENST00000357475 GRIK4Q16099 956 aa28.28■■■□□ 2.12
SSBP3-202ENST00000357475 MARCH8Q5T0T0 291 aa28.28■■■□□ 2.12
SSBP3-202ENST00000357475 PADI6Q6TGC4 694 aa28.28■■■□□ 2.12
SSBP3-202ENST00000357475 CEP57L1Q8IYX8 460 aa28.28■■■□□ 2.12
SSBP3-202ENST00000357475 KCTD17Q8N5Z5 321 aa28.28■■■□□ 2.12
SSBP3-202ENST00000357475 LMBR1Q8WVP7 490 aa28.28■■■□□ 2.12
SSBP3-202ENST00000357475 PYM1Q9BRP8 204 aaKnown RBP28.28■■■□□ 2.12
SSBP3-202ENST00000357475 MYMKA6NI61 221 aa28.27■■■□□ 2.12
SSBP3-202ENST00000357475 USO1O60763 962 aaKnown RBP28.27■■■□□ 2.12
SSBP3-202ENST00000357475 CYP11B2P19099 503 aa28.27■■■□□ 2.12
SSBP3-202ENST00000357475 RAD51AP2Q09MP3 1159 aa28.27■■■□□ 2.12
SSBP3-202ENST00000357475 ITGA7Q13683 1181 aa28.27■■■□□ 2.12
SSBP3-202ENST00000357475 RINT1Q6NUQ1 792 aa28.27■■■□□ 2.12
SSBP3-202ENST00000357475 SV2BQ7L1I2 683 aa28.27■■■□□ 2.12
SSBP3-202ENST00000357475 SH3RF1Q7Z6J0 888 aa28.27■■■□□ 2.12
SSBP3-202ENST00000357475 GPBP1Q86WP2 473 aa28.27■■■□□ 2.12
SSBP3-202ENST00000357475 ERCC4Q92889 916 aaPredicted RBP28.27■■■□□ 2.12
SSBP3-202ENST00000357475 GLT1D1Q96MS3 346 aa28.27■■■□□ 2.12
SSBP3-202ENST00000357475 CUEDC2Q9H467 287 aa28.27■■■□□ 2.12
SSBP3-202ENST00000357475 KINO60870 393 aaKnown RBP28.26■■■□□ 2.11
SSBP3-202ENST00000357475 MBD3O95983 291 aa28.26■■■□□ 2.11
SSBP3-202ENST00000357475 EN2P19622 333 aaPredicted RBP28.26■■■□□ 2.11
SSBP3-202ENST00000357475 SOX10P56693 466 aa28.26■■■□□ 2.11
SSBP3-202ENST00000357475 CACNB1Q02641 598 aaPredicted RBP28.26■■■□□ 2.11
SSBP3-202ENST00000357475 C7orf31Q8N865 590 aa28.26■■■□□ 2.11
SSBP3-202ENST00000357475 BLZF1Q9H2G9 400 aa28.26■■■□□ 2.11
SSBP3-202ENST00000357475 USP25Q9UHP3 1055 aa28.26■■■□□ 2.11
SSBP3-202ENST00000357475 CABYRO75952 493 aa28.25■■■□□ 2.11
SSBP3-202ENST00000357475 CAMK4Q16566 473 aa28.25■■■□□ 2.11
SSBP3-202ENST00000357475 FAM47CQ5HY64 1035 aa28.25■■■□□ 2.11
SSBP3-202ENST00000357475 ZNF484Q5JVG2 852 aa28.25■■■□□ 2.11
SSBP3-202ENST00000357475 C1orf186Q6ZWK4 172 aa28.25■■■□□ 2.11
SSBP3-202ENST00000357475 MAEAQ7L5Y9 396 aa28.25■■■□□ 2.11
SSBP3-202ENST00000357475 CCDC43Q96MW1 224 aaKnown RBP28.25■■■□□ 2.11
SSBP3-202ENST00000357475 TIGD1Q96MW7 591 aa28.25■■■□□ 2.11
SSBP3-202ENST00000357475 XPNPEP1Q9NQW7 623 aa28.25■■■□□ 2.11
SSBP3-202ENST00000357475 STARD7Q9NQZ5 370 aa28.25■■■□□ 2.11
SSBP3-202ENST00000357475 C22orf31O95567 290 aa28.24■■■□□ 2.11
SSBP3-202ENST00000357475 HOXC8P31273 242 aa28.24■■■□□ 2.11
SSBP3-202ENST00000357475 MDM2Q00987 491 aaPredicted RBP28.24■■■□□ 2.11
SSBP3-202ENST00000357475 CUL4BQ13620 913 aa28.24■■■□□ 2.11
SSBP3-202ENST00000357475 GDF6Q6KF10 455 aaPredicted RBP28.24■■■□□ 2.11
SSBP3-202ENST00000357475 DYMQ7RTS9 669 aa28.24■■■□□ 2.11
SSBP3-202ENST00000357475 SENP6Q9GZR1 1112 aaPredicted RBP28.24■■■□□ 2.11
SSBP3-202ENST00000357475 TNMDQ9H2S6 317 aa28.24■■■□□ 2.11
SSBP3-202ENST00000357475 COL1A2P08123 1366 aa28.24■■■□□ 2.11
SSBP3-202ENST00000357475 DRP2Q13474 957 aa28.23■■■□□ 2.11
SSBP3-202ENST00000357475 DHX33Q9H6R0 707 aaKnown RBP28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms