RNA–Protein interactions for RNA: ENST00000357171.7

SHANK2-202, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 1,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-202ENST00000357171 PCDHA11Q9Y5I1 949 aa15.28■□□□□ 0.04
SHANK2-202ENST00000357171 ZBBXA8MT70 800 aa15.27■□□□□ 0.04
SHANK2-202ENST00000357171 KIF28PB7ZC32 967 aa15.27■□□□□ 0.04
SHANK2-202ENST00000357171 RBAK-RBAKDNI3L0D1 243 aa15.27■□□□□ 0.04
SHANK2-202ENST00000357171 CUL4AQ13619 759 aa15.27■□□□□ 0.04
SHANK2-202ENST00000357171 LPIN1Q14693 890 aa15.27■□□□□ 0.04
SHANK2-202ENST00000357171 RAB30Q15771 203 aa15.27■□□□□ 0.04
SHANK2-202ENST00000357171 FBXO47Q5MNV8 452 aa15.27■□□□□ 0.04
SHANK2-202ENST00000357171 ZNF697Q5TEC3 545 aa15.27■□□□□ 0.04
SHANK2-202ENST00000357171 IER5Q5VY09 327 aa15.27■□□□□ 0.04
SHANK2-202ENST00000357171 NOSTRINQ8IVI9 506 aa15.27■□□□□ 0.04
SHANK2-202ENST00000357171 CKAP2LQ8IYA6 745 aa15.27■□□□□ 0.04
SHANK2-202ENST00000357171 TIFAQ96CG3 184 aa15.27■□□□□ 0.04
SHANK2-202ENST00000357171 GUCD1Q96NT3 240 aa15.27■□□□□ 0.04
SHANK2-202ENST00000357171 NRBP2Q9NSY0 501 aa15.27■□□□□ 0.04
SHANK2-202ENST00000357171 CDY2AQ9Y6F7 541 aa15.27■□□□□ 0.04
SHANK2-202ENST00000357171 A0A0C4DFX4 3053 aa15.27■□□□□ 0.03
SHANK2-202ENST00000357171 MAGEB2O15479 319 aa15.26■□□□□ 0.03
SHANK2-202ENST00000357171 NEMFO60524 1076 aa15.26■□□□□ 0.03
SHANK2-202ENST00000357171 BAG4O95429 457 aaKnown RBP15.26■□□□□ 0.03
SHANK2-202ENST00000357171 TRAPPC10P48553 1259 aa15.26■□□□□ 0.03
SHANK2-202ENST00000357171 PSMC5P62195 406 aa15.26■□□□□ 0.03
SHANK2-202ENST00000357171 EPHA7Q15375 998 aa15.26■□□□□ 0.03
SHANK2-202ENST00000357171 XKR3Q5GH77 459 aa15.26■□□□□ 0.03
SHANK2-202ENST00000357171 HERC6Q8IVU3 1022 aa15.26■□□□□ 0.03
SHANK2-202ENST00000357171 USP38Q8NB14 1042 aa15.26■□□□□ 0.03
SHANK2-202ENST00000357171 SEPT8Q92599 483 aa15.26■□□□□ 0.03
SHANK2-202ENST00000357171 APBB2Q92870 758 aa15.26■□□□□ 0.03
SHANK2-202ENST00000357171 FAM49AQ9H0Q0 323 aaPredicted RBP15.26■□□□□ 0.03
SHANK2-202ENST00000357171 PCDHA12Q9UN75 941 aa15.26■□□□□ 0.03
SHANK2-202ENST00000357171 YBX2Q9Y2T7 364 aaKnown RBP15.26■□□□□ 0.03
SHANK2-202ENST00000357171 KIF3AQ9Y496 699 aa15.26■□□□□ 0.03
SHANK2-202ENST00000357171 IGKV6-21A0A0C4DH24 114 aa15.25■□□□□ 0.03
SHANK2-202ENST00000357171 P4HBP07237 508 aaKnown RBP15.25■□□□□ 0.03
SHANK2-202ENST00000357171 QARSP47897 775 aaKnown RBP15.25■□□□□ 0.03
SHANK2-202ENST00000357171 DEFB103AP81534 67 aa15.25■□□□□ 0.03
SHANK2-202ENST00000357171 CALCRLQ16602 461 aa15.25■□□□□ 0.03
SHANK2-202ENST00000357171 FAM43BQ6ZT52 329 aaPredicted RBP15.25■□□□□ 0.03
SHANK2-202ENST00000357171 ANO5Q75V66 913 aa15.25■□□□□ 0.03
SHANK2-202ENST00000357171 HSD17B14Q9BPX1 270 aa15.25■□□□□ 0.03
SHANK2-202ENST00000357171 IFIH1Q9BYX4 1025 aaKnown RBP15.25■□□□□ 0.03
SHANK2-202ENST00000357171 CELF4Q9BZC1 486 aaKnown RBP15.25■□□□□ 0.03
SHANK2-202ENST00000357171 TMEM60Q9H2L4 133 aa15.25■□□□□ 0.03
SHANK2-202ENST00000357171 AGO3Q9H9G7 860 aaKnown RBP15.25■□□□□ 0.03
SHANK2-202ENST00000357171 WRAP73Q9P2S5 460 aaPredicted RBP15.25■□□□□ 0.03
SHANK2-202ENST00000357171 TRPV2Q9Y5S1 764 aa15.25■□□□□ 0.03
SHANK2-202ENST00000357171 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.24■□□□□ 0.03
SHANK2-202ENST00000357171 GJB5O95377 273 aa15.24■□□□□ 0.03
SHANK2-202ENST00000357171 GHRP10912 638 aa15.24■□□□□ 0.03
SHANK2-202ENST00000357171 GJB2P29033 226 aa15.24■□□□□ 0.03
SHANK2-202ENST00000357171 KCNJ6P48051 423 aa15.24■□□□□ 0.03
SHANK2-202ENST00000357171 TOB1P50616 345 aaPredicted RBP15.24■□□□□ 0.03
SHANK2-202ENST00000357171 RABGGTBP53611 331 aa15.24■□□□□ 0.03
SHANK2-202ENST00000357171 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.24■□□□□ 0.035e-9■■■□□ 18.5
SHANK2-202ENST00000357171 TSHZ1Q6ZSZ6 1077 aa15.24■□□□□ 0.03
SHANK2-202ENST00000357171 C4orf19Q8IY42 314 aa15.24■□□□□ 0.03
SHANK2-202ENST00000357171 C4orf32Q8N8J7 132 aa15.24■□□□□ 0.03
SHANK2-202ENST00000357171 BANK1Q8NDB2 785 aa15.24■□□□□ 0.03
SHANK2-202ENST00000357171 ZNF576Q9H609 170 aa15.24■□□□□ 0.03
SHANK2-202ENST00000357171 TTC12Q9H892 705 aaPredicted RBP15.24■□□□□ 0.03
SHANK2-202ENST00000357171 MSRAQ9UJ68 235 aa15.24■□□□□ 0.03
SHANK2-202ENST00000357171 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.24■□□□□ 0.03
SHANK2-202ENST00000357171 XIRP2A4UGR9 3374 aa15.24■□□□□ 0.03
SHANK2-202ENST00000357171 COL4A6Q14031 1691 aa15.24■□□□□ 0.03
SHANK2-202ENST00000357171 DKC1O60832 514 aaKnown RBP eCLIP15.24■□□□□ 0.031e-6■■■■■ 39.3
SHANK2-202ENST00000357171 GPR32O75388 356 aa15.24■□□□□ 0.03
SHANK2-202ENST00000357171 SLITRK3O94933 977 aa15.24■□□□□ 0.03
SHANK2-202ENST00000357171 MYOGP15173 224 aa15.24■□□□□ 0.03
SHANK2-202ENST00000357171 TMEM62Q0P6H9 643 aa15.24■□□□□ 0.03
SHANK2-202ENST00000357171 ZNF710Q8N1W2 664 aa15.24■□□□□ 0.03
SHANK2-202ENST00000357171 STXBP5LQ9Y2K9 1186 aa15.24■□□□□ 0.03
SHANK2-202ENST00000357171 VCANP13611 3396 aa15.23■□□□□ 0.03
SHANK2-202ENST00000357171 TMEM150BA6NC51 233 aa15.23■□□□□ 0.03
SHANK2-202ENST00000357171 M0QZ92 97 aa15.23■□□□□ 0.03
SHANK2-202ENST00000357171 MARCH6O60337 910 aa15.23■□□□□ 0.03
SHANK2-202ENST00000357171 LYPLA2O95372 231 aa15.23■□□□□ 0.03
SHANK2-202ENST00000357171 MCM7P33993 719 aa15.23■□□□□ 0.03
SHANK2-202ENST00000357171 HTRA4P83105 476 aaPredicted RBP15.23■□□□□ 0.03
SHANK2-202ENST00000357171 TTC38Q5R3I4 469 aa15.23■□□□□ 0.03
SHANK2-202ENST00000357171 EFCAB12Q6NXP0 572 aa15.23■□□□□ 0.03
SHANK2-202ENST00000357171 TRMT1LQ7Z2T5 733 aaKnown RBP15.23■□□□□ 0.03
SHANK2-202ENST00000357171 CRIPAKQ8N1N5 446 aa15.23■□□□□ 0.03
SHANK2-202ENST00000357171 TMEM40Q8WWA1 233 aa15.23■□□□□ 0.03
SHANK2-202ENST00000357171 TOP1MTQ969P6 601 aa15.23■□□□□ 0.03
SHANK2-202ENST00000357171 LXNQ9BS40 222 aa15.23■□□□□ 0.03
SHANK2-202ENST00000357171 CDHR5Q9HBB8 845 aa15.23■□□□□ 0.03
SHANK2-202ENST00000357171 RGL1Q9NZL6 768 aa15.23■□□□□ 0.03
SHANK2-202ENST00000357171 SEPT9Q9UHD8 586 aaPredicted RBP15.23■□□□□ 0.03
SHANK2-202ENST00000357171 SMC3Q9UQE7 1217 aa15.23■□□□□ 0.03
SHANK2-202ENST00000357171 PPME1Q9Y570 386 aa15.23■□□□□ 0.03
SHANK2-202ENST00000357171 MAFO75444 373 aaPredicted RBP15.22■□□□□ 0.03
SHANK2-202ENST00000357171 TXKP42681 527 aa15.22■□□□□ 0.03
SHANK2-202ENST00000357171 CRYBB1P53674 252 aaPredicted RBP15.22■□□□□ 0.03
SHANK2-202ENST00000357171 TBC1D8BQ0IIM8 1120 aa15.22■□□□□ 0.03
SHANK2-202ENST00000357171 GRIN2CQ14957 1233 aa15.22■□□□□ 0.03
SHANK2-202ENST00000357171 NCAPH2Q6IBW4 605 aa15.22■□□□□ 0.03
SHANK2-202ENST00000357171 TMCO2Q7Z6W1 182 aaPredicted RBP15.22■□□□□ 0.03
SHANK2-202ENST00000357171 METTL13Q8N6R0 699 aa15.22■□□□□ 0.03
SHANK2-202ENST00000357171 NEK9Q8TD19 979 aa15.22■□□□□ 0.03
SHANK2-202ENST00000357171 DYDC2Q96IM9 177 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms