RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 RARS2Q5T160 578 aaKnown RBP7.08□□□□□ -1.28
TRIM38-201ENST00000357085 BLIDQ8IZY5 108 aa7.08□□□□□ -1.28
TRIM38-201ENST00000357085 GRIN2DO15399 1336 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 SPECC1L-ADORA2AF8WAN1 911 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 HNRNPH3P31942 346 aaKnown RBP7.07□□□□□ -1.28
TRIM38-201ENST00000357085 MCM7P33993 719 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 NUF2Q9BZD4 464 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 TBC1D23Q9NUY8 699 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 SIGLEC1Q9BZZ2 1709 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 NAPAP54920 295 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 CYP27A1Q02318 531 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 FMR1Q06787 632 aaKnown RBP eCLIP7.07□□□□□ -1.28
TRIM38-201ENST00000357085 LBRQ14739 615 aaKnown RBP7.07□□□□□ -1.28
TRIM38-201ENST00000357085 SGSM1Q2NKQ1 1148 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 GRAMD1CQ8IYS0 662 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 HIC2Q96JB3 615 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 TTI1O43156 1089 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 SPOPO43791 374 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 AMPD2Q01433 879 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 BLMHQ13867 455 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 RCN2Q14257 317 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 PARP6Q2NL67 630 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 USP38Q8NB14 1042 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 DYDC2Q96IM9 177 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 SERPINB12Q96P63 405 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 TGS1Q96RS0 853 aaKnown RBP7.07□□□□□ -1.28
TRIM38-201ENST00000357085 C10orf88Q9H8K7 445 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 TMBIM4Q9HC24 238 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 ASIC3Q9UHC3 531 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 STAT4Q14765 748 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 NAB2Q15742 525 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 ZKSCAN3Q9BRR0 538 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 DDX23Q9BUQ8 820 aaKnown RBP7.07□□□□□ -1.28
TRIM38-201ENST00000357085 GDF3Q9NR23 364 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 FBXL5Q9UKA1 691 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 PHF8Q9UPP1 1060 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 ARHGAP23Q9P227 1491 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 PPIP5K2O43314 1243 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 CHN1P15882 459 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 GRIK3Q13003 919 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 PCNX4Q63HM2 1172 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 SHC4Q6S5L8 630 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 PDCD7Q8N8D1 485 aaKnown RBP7.07□□□□□ -1.28
TRIM38-201ENST00000357085 STKLD1Q8NE28 680 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 TRPC4APQ8TEL6 797 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 MAGEB18Q96M61 343 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 MID2Q9UJV3 735 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 SCN11AQ9UI33 1791 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 MYL6BP14649 208 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 RGS2P41220 211 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 KLHL38Q2WGJ6 581 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 Q4G0T1 1027 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 EIF2AQ9BY44 585 aaKnown RBP7.07□□□□□ -1.28
TRIM38-201ENST00000357085 RBM12Q9NTZ6 932 aaKnown RBP7.07□□□□□ -1.28
TRIM38-201ENST00000357085 SCINQ9Y6U3 715 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 EIF4E1BA6NMX2 242 aaKnown RBP7.07□□□□□ -1.28
TRIM38-201ENST00000357085 FAM200BP0CF97 657 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 YWHAEP62258 255 aaKnown RBP7.07□□□□□ -1.28
TRIM38-201ENST00000357085 ARMCX6Q7L4S7 300 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 TMEM139Q8IV31 216 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 TATDN2Q93075 761 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 SEPT3Q9UH03 358 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 SLC4A4Q9Y6R1 1079 aa7.07□□□□□ -1.28
TRIM38-201ENST00000357085 ZNF185O15231 689 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 MGRN1O60291 552 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 TMOD1P28289 359 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 SRRM1Q8IYB3 904 aaKnown RBP7.06□□□□□ -1.28
TRIM38-201ENST00000357085 STAG2Q8N3U4 1231 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 ZFP69BQ9UJL9 534 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 PDE1BQ01064 536 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 KRR1Q13601 381 aaKnown RBP7.06□□□□□ -1.28
TRIM38-201ENST00000357085 ZFYVE27Q5T4F4 411 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 LPIN2Q92539 896 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 LARP4BQ92615 738 aaKnown RBP7.06□□□□□ -1.28
TRIM38-201ENST00000357085 SAR1AQ9NR31 198 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 SCHIP1Q9P0W5 487 aaPredicted RBP7.06□□□□□ -1.28
TRIM38-201ENST00000357085 SORCS3Q9UPU3 1222 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 ADGRA3Q8IWK6 1321 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 SMNDC1O75940 238 aaKnown RBP eCLIP7.06□□□□□ -1.28
TRIM38-201ENST00000357085 RXRAP19793 462 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 ASPHQ12797 758 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 SMYD4Q8IYR2 804 aaPredicted RBP7.06□□□□□ -1.28
TRIM38-201ENST00000357085 SUCLG2Q96I99 432 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 TRAIPQ9BWF2 469 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 CCSER1Q9C0I3 900 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 EHD4Q9H223 541 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 KCND2Q9NZV8 630 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 ATXN10Q9UBB4 475 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 DENND2AQ9ULE3 1009 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 MAPK8IP1Q9UQF2 711 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 TUBA4AP68366 448 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 GSTA5Q7RTV2 222 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 TNIP2Q8NFZ5 429 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 JADE3Q92613 823 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 PABPC3Q9H361 631 aaKnown RBP7.06□□□□□ -1.28
TRIM38-201ENST00000357085 PCDHA4Q9UN74 947 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 ZHX2Q9Y6X8 837 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 NUDT17P0C025 328 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 RAB27AP51159 221 aa7.06□□□□□ -1.28
TRIM38-201ENST00000357085 ILF2Q12905 390 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms