RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 STAT2P52630 851 aa15.92■□□□□ 0.14
CHD4-201ENST00000357008 RASGRF1Q13972 1273 aa15.92■□□□□ 0.14
CHD4-201ENST00000357008 FSCBQ5H9T9 825 aa15.92■□□□□ 0.14
CHD4-201ENST00000357008 ERICH1Q86X53 443 aa15.92■□□□□ 0.14
CHD4-201ENST00000357008 THOC1Q96FV9 657 aaKnown RBP15.92■□□□□ 0.14
CHD4-201ENST00000357008 LRRC37BQ96QE4 947 aa15.92■□□□□ 0.14
CHD4-201ENST00000357008 CD58P19256 250 aa15.92■□□□□ 0.14
CHD4-201ENST00000357008 TTC13Q8NBP0 860 aa15.92■□□□□ 0.14
CHD4-201ENST00000357008 DYNLL2Q96FJ2 89 aa15.92■□□□□ 0.14
CHD4-201ENST00000357008 DHX36Q9H2U1 1008 aaKnown RBP15.92■□□□□ 0.14
CHD4-201ENST00000357008 ANAPC7Q9UJX3 599 aa15.92■□□□□ 0.14
CHD4-201ENST00000357008 PPME1Q9Y570 386 aa15.92■□□□□ 0.14
CHD4-201ENST00000357008 RCAN1P53805 252 aa15.91■□□□□ 0.14
CHD4-201ENST00000357008 NFRKBQ6P4R8 1299 aa15.91■□□□□ 0.14
CHD4-201ENST00000357008 KLC2Q9H0B6 622 aa15.91■□□□□ 0.14
CHD4-201ENST00000357008 CNOT8Q9UFF9 292 aaKnown RBP15.91■□□□□ 0.14
CHD4-201ENST00000357008 ASAP1Q9ULH1 1129 aa15.91■□□□□ 0.14
CHD4-201ENST00000357008 SEMA3FQ13275 785 aa15.91■□□□□ 0.14
CHD4-201ENST00000357008 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.91■□□□□ 0.14
CHD4-201ENST00000357008 FAM193BQ96PV7 902 aaPredicted RBP15.91■□□□□ 0.14
CHD4-201ENST00000357008 LCMT1Q9UIC8 334 aa15.91■□□□□ 0.14
CHD4-201ENST00000357008 HAUS5O94927 633 aa15.91■□□□□ 0.14
CHD4-201ENST00000357008 KLHL38Q2WGJ6 581 aa15.91■□□□□ 0.14
CHD4-201ENST00000357008 SPOUT1Q5T280 376 aaKnown RBP15.91■□□□□ 0.14
CHD4-201ENST00000357008 PARP9Q8IXQ6 854 aa15.91■□□□□ 0.14
CHD4-201ENST00000357008 CHMP6Q96FZ7 201 aa15.91■□□□□ 0.14
CHD4-201ENST00000357008 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.91■□□□□ 0.142e-8■□□□□ 11.3
CHD4-201ENST00000357008 ZDHHC9Q9Y397 364 aa15.91■□□□□ 0.14
CHD4-201ENST00000357008 KLC3Q6P597 504 aa15.91■□□□□ 0.14
CHD4-201ENST00000357008 FAF2Q96CS3 445 aa15.91■□□□□ 0.14
CHD4-201ENST00000357008 SLAIN2Q9P270 581 aa15.91■□□□□ 0.14
CHD4-201ENST00000357008 USP17L3A6NCW0 530 aa15.91■□□□□ 0.14
CHD4-201ENST00000357008 USP17L4A6NCW7 530 aa15.91■□□□□ 0.14
CHD4-201ENST00000357008 PYGBP11216 843 aa15.91■□□□□ 0.14
CHD4-201ENST00000357008 OCRLQ01968 901 aa15.91■□□□□ 0.14
CHD4-201ENST00000357008 PFKFB3Q16875 520 aaPredicted RBP15.91■□□□□ 0.14
CHD4-201ENST00000357008 USP17L1Q7RTZ2 530 aa15.91■□□□□ 0.14
CHD4-201ENST00000357008 TMC4Q7Z404 712 aa15.91■□□□□ 0.14
CHD4-201ENST00000357008 HIPK4Q8NE63 616 aa15.91■□□□□ 0.14
CHD4-201ENST00000357008 APOL6Q9BWW8 343 aa15.91■□□□□ 0.14
CHD4-201ENST00000357008 FAM187AA6NFU0 413 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 CASP1P29466 404 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 CHRNA3P32297 505 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 SLC12A1Q13621 1099 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 FAM83BQ5T0W9 1011 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 RUBCNQ92622 972 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 LRRC4Q9HBW1 653 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 TBC1D9BQ66K14 1250 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 TRIM67Q6ZTA4 783 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 C7orf31Q8N865 590 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 ZC3H15Q8WU90 426 aaKnown RBP15.9■□□□□ 0.14
CHD4-201ENST00000357008 ALDH8A1Q9H2A2 487 aaPredicted RBP15.9■□□□□ 0.14
CHD4-201ENST00000357008 ADAM22Q9P0K1 906 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 TTC26A0AVF1 554 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 NVLO15381 856 aaKnown RBP15.9■□□□□ 0.14
CHD4-201ENST00000357008 CHEK2O96017 543 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 PSMA2P25787 234 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 SLFN12LQ6IEE8 588 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 TRMT10CQ7L0Y3 403 aaKnown RBP15.9■□□□□ 0.14
CHD4-201ENST00000357008 TTC1Q99614 292 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 MTA3Q9BTC8 594 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 EPC1Q9H2F5 836 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 SLITRK6Q9H5Y7 841 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 MAGED2Q9UNF1 606 aaPredicted RBP15.9■□□□□ 0.14
CHD4-201ENST00000357008 AKT3Q9Y243 479 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 ERVV-1B6SEH8 477 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 MYO1EQ12965 1108 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 AP3B2Q13367 1082 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 TAF1BQ53T94 588 aaPredicted RBP15.9■□□□□ 0.14
CHD4-201ENST00000357008 GIPC2Q8TF65 315 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 A0A1W2PQC6 194 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 CCND2P30279 289 aa15.9■□□□□ 0.14
CHD4-201ENST00000357008 CTTNQ14247 550 aaKnown RBP15.9■□□□□ 0.14
CHD4-201ENST00000357008 GOLGA8IPA6NC78 632 aa15.89■□□□□ 0.14
CHD4-201ENST00000357008 GOLGA8JA6NMD2 632 aa15.89■□□□□ 0.14
CHD4-201ENST00000357008 CREB3O43889 395 aa15.89■□□□□ 0.14
CHD4-201ENST00000357008 NR3C1P04150 777 aa15.89■□□□□ 0.14
CHD4-201ENST00000357008 BRAFP15056 766 aa15.89■□□□□ 0.14
CHD4-201ENST00000357008 ACTN3Q08043 901 aaPredicted RBP15.89■□□□□ 0.14
CHD4-201ENST00000357008 KCNH2Q12809 1159 aa15.89■□□□□ 0.14
CHD4-201ENST00000357008 CDK12Q9NYV4 1490 aaPredicted RBP15.89■□□□□ 0.13
CHD4-201ENST00000357008 ESYT3A0FGR9 886 aa15.89■□□□□ 0.13
CHD4-201ENST00000357008 H7C1W4 665 aa15.89■□□□□ 0.13
CHD4-201ENST00000357008 TEX33O43247 280 aa15.89■□□□□ 0.13
CHD4-201ENST00000357008 KCNJ6P48051 423 aa15.89■□□□□ 0.13
CHD4-201ENST00000357008 MECOMQ03112 1051 aa15.89■□□□□ 0.13
CHD4-201ENST00000357008 C1orf146Q5VVC0 180 aa15.89■□□□□ 0.13
CHD4-201ENST00000357008 FLAD1Q8NFF5 587 aa15.89■□□□□ 0.13
CHD4-201ENST00000357008 DHX38Q92620 1227 aaKnown RBP15.89■□□□□ 0.13
CHD4-201ENST00000357008 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.89■□□□□ 0.132e-6■■■■□ 22
CHD4-201ENST00000357008 YIPF3Q9GZM5 350 aa15.89■□□□□ 0.13
CHD4-201ENST00000357008 ZWILCHQ9H900 591 aa15.89■□□□□ 0.13
CHD4-201ENST00000357008 RFX7Q2KHR2 1363 aa15.89■□□□□ 0.13
CHD4-201ENST00000357008 WDR17Q8IZU2 1322 aa15.89■□□□□ 0.13
CHD4-201ENST00000357008 GADL1Q6ZQY3 521 aa15.89■□□□□ 0.13
CHD4-201ENST00000357008 FBXL13Q8NEE6 735 aa15.89■□□□□ 0.13
CHD4-201ENST00000357008 VPS39Q96JC1 886 aa15.89■□□□□ 0.13
CHD4-201ENST00000357008 HDAC6Q9UBN7 1215 aa15.89■□□□□ 0.13
CHD4-201ENST00000357008 ADD3Q9UEY8 706 aaKnown RBP15.89■□□□□ 0.13
CHD4-201ENST00000357008 LPXNO60711 386 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms