RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 ARL13BQ3SXY8 428 aa12.31□□□□□ -0.44
SPTBN1-202ENST00000356805 SLC7A3Q8WY07 619 aa12.31□□□□□ -0.44
SPTBN1-202ENST00000356805 PALMDQ9NP74 551 aa12.31□□□□□ -0.44
SPTBN1-202ENST00000356805 TRPC5Q9UL62 973 aaPredicted RBP12.31□□□□□ -0.44
SPTBN1-202ENST00000356805 SYNGAP1Q96PV0 1343 aa12.31□□□□□ -0.44
SPTBN1-202ENST00000356805 SERPINI2O75830 405 aa12.31□□□□□ -0.44
SPTBN1-202ENST00000356805 PMS1P54277 932 aaKnown RBP12.31□□□□□ -0.44
SPTBN1-202ENST00000356805 ANKRD7Q92527 254 aa12.31□□□□□ -0.44
SPTBN1-202ENST00000356805 FSD1LQ9BXM9 530 aa12.31□□□□□ -0.44
SPTBN1-202ENST00000356805 CLRN2A0PK11 232 aa12.31□□□□□ -0.44
SPTBN1-202ENST00000356805 EFCAB14O75071 495 aa12.31□□□□□ -0.44
SPTBN1-202ENST00000356805 CCND1P24385 295 aa12.31□□□□□ -0.44
SPTBN1-202ENST00000356805 BCAMP50895 628 aa12.31□□□□□ -0.44
SPTBN1-202ENST00000356805 FKBP3Q00688 224 aaKnown RBP12.31□□□□□ -0.44
SPTBN1-202ENST00000356805 NLRP14Q86W24 1093 aa12.31□□□□□ -0.44
SPTBN1-202ENST00000356805 ELMOD1Q8N336 334 aa12.31□□□□□ -0.44
SPTBN1-202ENST00000356805 PI4K2BG5E9Z4 385 aa12.31□□□□□ -0.44
SPTBN1-202ENST00000356805 SLFN14P0C7P3 912 aa12.31□□□□□ -0.44
SPTBN1-202ENST00000356805 KRT4P19013 534 aa12.31□□□□□ -0.44
SPTBN1-202ENST00000356805 DR1Q01658 176 aa12.31□□□□□ -0.44
SPTBN1-202ENST00000356805 SLC52A2Q9HAB3 445 aa12.31□□□□□ -0.44
SPTBN1-202ENST00000356805 MRGBPQ9NV56 204 aa12.31□□□□□ -0.44
SPTBN1-202ENST00000356805 URB2Q14146 1524 aaKnown RBP12.31□□□□□ -0.44
SPTBN1-202ENST00000356805 GFPT2O94808 682 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 ARHGEF6Q15052 776 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 NDUFAF2Q8N183 169 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 IP6K1Q92551 441 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 THOC1Q96FV9 657 aaKnown RBP12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 ABT1Q9ULW3 272 aaKnown RBP12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 GCC2Q8IWJ2 1684 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 MIF4GDA9UHW6 222 aaKnown RBP12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 APOA1P02647 267 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 RBBP7Q16576 425 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 IFNL3Q8IZI9 196 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 ATP6V1G3Q96LB4 118 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 NFKBIL1Q9UBC1 381 aaPredicted RBP12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 MEIS1O00470 390 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 AFPP02771 609 aaKnown RBP12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 PDCLQ13371 301 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 ZNF658Q5TYW1 1059 aaPredicted RBP12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 PDXDC1Q6P996 788 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 WDR75Q8IWA0 830 aaKnown RBP12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 DHX38Q92620 1227 aaKnown RBP12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 SENP1Q9P0U3 644 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 SERPING1P05155 500 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 TAC1P20366 129 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 CACNB1Q02641 598 aaPredicted RBP12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 GOLGA8FQ08AF8 430 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 GOLGA8DPQ0D2H9 430 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 CRLF3Q8IUI8 442 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 IFT43Q96FT9 208 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 NAF1Q96HR8 494 aaKnown RBP12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 WARS2Q9UGM6 360 aaKnown RBP12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 USP21Q9UK80 565 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 CLIC4Q9Y696 253 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 E7ENQ6 273 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 EXOC8Q8IYI6 725 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 ICA1LQ8NDH6 482 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 BTN2A2Q8WVV5 523 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 CCDC90BQ9GZT6 254 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 NDUFA13Q9P0J0 144 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 TSPOAP1O95153 1857 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 PRPF4O43172 522 aaKnown RBP eCLIP12.3□□□□□ -0.441e-7■□□□□ 9.5
SPTBN1-202ENST00000356805 ACCSQ96QU6 501 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 TBC1D23Q9NUY8 699 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 ARHGAP26Q9UNA1 814 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 A0A1B0GW55 424 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 F5H423 210 aaPredicted RBP12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 MFAP3LO75121 409 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 TMCC1O94876 653 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 DUX4L2P0CJ85 424 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 DUX4L3P0CJ86 424 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 DUX4L4P0CJ87 422 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 DUX4L5P0CJ88 424 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 DUX4L6P0CJ89 424 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 DUX4L7P0CJ90 424 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 GGCXP38435 758 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 SLC7A5Q01650 507 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 HIF1AQ16665 826 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 OR6B2Q6IFH4 312 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 C11orf57Q6ZUT1 292 aaPredicted RBP12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 SMYD4Q8IYR2 804 aaPredicted RBP12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 FAM133AQ8N9E0 248 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 NLRP4Q96MN2 994 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 OSBPL1AQ9BXW6 950 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 DUX4Q9UBX2 424 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 CARMIL3Q8ND23 1372 aa12.3□□□□□ -0.44
SPTBN1-202ENST00000356805 PNMA6EA0A0J9YXQ4 647 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 RARS2Q5T160 578 aaKnown RBP12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 SLFN13Q68D06 897 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 EPN3Q9H201 632 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 C10orf88Q9H8K7 445 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 DNAJC17Q9NVM6 304 aaKnown RBP12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 HPCAL4Q9UM19 191 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 PLAAQ9Y263 795 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 CTTNBP2Q8WZ74 1663 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 HSPA4LO95757 839 aa12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 CYLC2Q14093 348 aaPredicted RBP12.29□□□□□ -0.44
SPTBN1-202ENST00000356805 CLCA2Q9UQC9 943 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms