RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 RALAP11233 206 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 GTF2E2P29084 291 aaKnown RBP12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 PRAMEP78395 509 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 SGO2Q562F6 1265 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 POTEEQ6S8J3 1075 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 BTN2A1Q7KYR7 527 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 CLYBLQ8N0X4 340 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 TK2O00142 265 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 HUS1O60921 280 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 ALDH1L1O75891 902 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 KRT20P35900 424 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 TP53BP2Q13625 1128 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 ANO1Q5XXA6 986 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 LUZP2Q86TE4 346 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 TRIM58Q8NG06 486 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 SH3TC2Q8TF17 1288 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 GJA10Q969M2 543 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 IARS2Q9NSE4 1012 aaKnown RBP12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 ITGAXP20702 1163 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 ARHGEF7Q14155 803 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 SF3B3Q15393 1217 aaKnown RBP12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 SPATA18Q8TC71 538 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 FAM161BQ96MY7 647 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 MTRF1O75570 445 aaKnown RBP12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 ERVK-10P10266 1014 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 MLNP12872 115 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 UBXN2AP68543 259 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 CENPPQ6IPU0 288 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 VN1R5Q7Z5H4 357 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 C11orf74Q86VG3 221 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 LEMD2Q8NC56 503 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 MRPL47Q9HD33 250 aaKnown RBP12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 VPS54Q9P1Q0 977 aa12.3□□□□□ -0.44
NUDCD3-202ENST00000355451 A0A087X0T9 212 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 LRRC14BA6NHZ5 514 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 BIRC5O15392 142 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 GPAA1O43292 621 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 TCP11X2Q5H9J9 407 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 GPATCH4Q5T3I0 446 aaKnown RBP12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 TRIP4Q15650 581 aaPredicted RBP12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 ACAD11Q709F0 780 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 ZNF280CQ8ND82 737 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 ARPP21Q9UBL0 812 aaPredicted RBP12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 CUTAO60888 179 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 ACADMP11310 421 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 SURF1Q15526 300 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 KIF2CQ99661 725 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 CARD6Q9BX69 1037 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 DDX56Q9NY93 547 aaKnown RBP12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 LRRN2O75325 713 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 STAT2P52630 851 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 CYP27A1Q02318 531 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 ADCK1Q86TW2 530 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 MAGOHBQ96A72 148 aaKnown RBP12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 KLHL29Q96CT2 875 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 KLHL25Q9H0H3 589 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 TBK1Q9UHD2 729 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 GRXCR2A6NFK2 248 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 RALBP11234 206 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 SMARCA1P28370 1054 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 RC3H1Q5TC82 1133 aaKnown RBP12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 DCAF5Q96JK2 942 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 ESYT1Q9BSJ8 1104 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 TRIM33Q9UPN9 1127 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 TNNQ9UQP3 1299 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 GDAQ9Y2T3 454 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 FRMD3A2A2Y4 597 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 RPN1P04843 607 aaKnown RBP12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 POLR2FP61218 127 aaKnown RBP12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 FAM117BQ6P1L5 589 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 GAS2L3Q86XJ1 694 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 CRLF3Q8IUI8 442 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 PIK3R5Q8WYR1 880 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 SPACA6W5XKT8 324 aa12.29□□□□□ -0.44
NUDCD3-202ENST00000355451 DDIASQ8IXT1 998 aa12.28□□□□□ -0.44
NUDCD3-202ENST00000355451 FAM47DPA6NHR8 397 aa12.28□□□□□ -0.44
NUDCD3-202ENST00000355451 SUPT3HO75486 399 aa12.28□□□□□ -0.44
NUDCD3-202ENST00000355451 EFTUD2Q15029 972 aaKnown RBP eCLIP12.28□□□□□ -0.44
NUDCD3-202ENST00000355451 KIAA2013Q8IYS2 634 aa12.28□□□□□ -0.44
NUDCD3-202ENST00000355451 ST13P5Q8NFI4 369 aaPredicted RBP12.28□□□□□ -0.44
NUDCD3-202ENST00000355451 NFU1Q9UMS0 254 aa12.28□□□□□ -0.44
NUDCD3-202ENST00000355451 STAMQ92783 540 aa12.28□□□□□ -0.44
NUDCD3-202ENST00000355451 PSD3Q9NYI0 1048 aa12.28□□□□□ -0.44
NUDCD3-202ENST00000355451 SAR1BQ9Y6B6 198 aa12.28□□□□□ -0.44
NUDCD3-202ENST00000355451 PSMD12O00232 456 aaPredicted RBP12.28□□□□□ -0.44
NUDCD3-202ENST00000355451 EXOC3L4Q17RC7 722 aa12.28□□□□□ -0.44
NUDCD3-202ENST00000355451 NEK8Q86SG6 692 aa12.28□□□□□ -0.44
NUDCD3-202ENST00000355451 AGBL1Q96MI9 1066 aa12.28□□□□□ -0.44
NUDCD3-202ENST00000355451 MCM8Q9UJA3 840 aa12.28□□□□□ -0.44
NUDCD3-202ENST00000355451 TRIM27P14373 513 aa12.28□□□□□ -0.44
NUDCD3-202ENST00000355451 LARP4BQ92615 738 aaKnown RBP12.28□□□□□ -0.44
NUDCD3-202ENST00000355451 ZWILCHQ9H900 591 aa12.28□□□□□ -0.44
NUDCD3-202ENST00000355451 TOPORSQ9NS56 1045 aaPredicted RBP12.28□□□□□ -0.44
NUDCD3-202ENST00000355451 ZBTB12Q9Y330 459 aaPredicted RBP12.28□□□□□ -0.44
NUDCD3-202ENST00000355451 MROH5Q6ZUA9 1318 aa12.28□□□□□ -0.44
NUDCD3-202ENST00000355451 ZNF532Q9HCE3 1301 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms