RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 RAVER1Q8IY67 606 aaKnown RBP11.8□□□□□ -0.52
SND1-201ENST00000354725 SMYD4Q8IYR2 804 aaPredicted RBP11.8□□□□□ -0.52
SND1-201ENST00000354725 SLC35F6Q8N357 371 aa11.8□□□□□ -0.52
SND1-201ENST00000354725 SRBD1Q8N5C6 995 aaKnown RBP11.8□□□□□ -0.52
SND1-201ENST00000354725 PGAP2Q9UHJ9 254 aa11.8□□□□□ -0.52
SND1-201ENST00000354725 WDR37Q9Y2I8 494 aa11.8□□□□□ -0.52
SND1-201ENST00000354725 NDUFAB1O14561 156 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 MGRN1O60291 552 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 ATP4AP20648 1035 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 NT5C2P49902 561 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 GNGT1P63211 74 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 TAGLNQ01995 201 aaKnown RBP11.79□□□□□ -0.52
SND1-201ENST00000354725 IFFO1Q0D2I5 559 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 BLMHQ13867 455 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 PFKFB3Q16875 520 aaPredicted RBP11.79□□□□□ -0.52
SND1-201ENST00000354725 COBLL1Q53SF7 1204 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 NUGGCQ68CJ6 796 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 SAMD3Q8N6K7 520 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 POLR3CQ9BUI4 534 aaPredicted RBP11.79□□□□□ -0.52
SND1-201ENST00000354725 UBE2OQ9C0C9 1292 aaKnown RBP11.79□□□□□ -0.52
SND1-201ENST00000354725 ZSWIM4Q9H7M6 989 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 LZTFL1Q9NQ48 299 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 SCHIP1Q9P0W5 487 aaPredicted RBP11.79□□□□□ -0.52
SND1-201ENST00000354725 PHF24Q9UPV7 400 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 GOLGA6L7A0A1B0GV03 622 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 CTAGE9A4FU28 777 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 VSNL1P62760 191 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 SPAG1Q07617 926 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 NSUN2Q08J23 767 aaKnown RBP eCLIP11.79□□□□□ -0.52
SND1-201ENST00000354725 PTGDRQ13258 359 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 ADSSL1Q8N142 457 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 MTMR14Q8NCE2 650 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 AGBL3Q8NEM8 1001 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 ANKS1AQ92625 1134 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 TRPM7Q96QT4 1865 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 RUFY1Q96T51 708 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 MRIQ9BWK5 157 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 TRPV5Q9NQA5 729 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 C15orf41Q9Y2V0 281 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 DDNO94850 711 aaPredicted RBP11.79□□□□□ -0.52
SND1-201ENST00000354725 SCG2P13521 617 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 ZNF132P52740 706 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 DRP2Q13474 957 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 PTPROQ16827 1216 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 PPFIBP1Q86W92 1011 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 SMYD1Q8NB12 490 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 NAPGQ99747 312 aaPredicted RBP11.79□□□□□ -0.52
SND1-201ENST00000354725 CORO1BQ9BR76 489 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 SH3GLB2Q9NR46 395 aa11.79□□□□□ -0.52
SND1-201ENST00000354725 TMEM221A6NGB7 291 aa11.78□□□□□ -0.52
SND1-201ENST00000354725 PARP1P09874 1014 aaKnown RBP11.78□□□□□ -0.52
SND1-201ENST00000354725 RPS12P25398 132 aaKnown RBP11.78□□□□□ -0.52
SND1-201ENST00000354725 SYCP2LQ5T4T6 812 aa11.78□□□□□ -0.52
SND1-201ENST00000354725 DAGLBQ8NCG7 672 aa11.78□□□□□ -0.52
SND1-201ENST00000354725 LRRC15Q8TF66 581 aa11.78□□□□□ -0.52
SND1-201ENST00000354725 SDR42E1Q8WUS8 393 aa11.78□□□□□ -0.52
SND1-201ENST00000354725 JDP2Q8WYK2 163 aa11.78□□□□□ -0.52
SND1-201ENST00000354725 CENPTQ96BT3 561 aa11.78□□□□□ -0.52
SND1-201ENST00000354725 STAMBPL1Q96FJ0 436 aa11.78□□□□□ -0.52
SND1-201ENST00000354725 UBAC1Q9BSL1 405 aa11.78□□□□□ -0.52
SND1-201ENST00000354725 INTUQ9ULD6 942 aa11.78□□□□□ -0.52
SND1-201ENST00000354725 CTNND2Q9UQB3 1225 aa11.78□□□□□ -0.52
SND1-201ENST00000354725 ATP8A1Q9Y2Q0 1164 aa11.78□□□□□ -0.52
SND1-201ENST00000354725 BUB1BO60566 1050 aaPredicted RBP11.78□□□□□ -0.52
SND1-201ENST00000354725 LONP1P36776 959 aaKnown RBP11.78□□□□□ -0.52
SND1-201ENST00000354725 HERVK_113P62684 666 aa11.78□□□□□ -0.52
SND1-201ENST00000354725 ADCY1Q08828 1119 aa11.78□□□□□ -0.52
SND1-201ENST00000354725 GRM1Q13255 1194 aa11.78□□□□□ -0.52
SND1-201ENST00000354725 NEK10Q6ZWH5 1172 aa11.78□□□□□ -0.52
SND1-201ENST00000354725 HDAC7Q8WUI4 952 aa11.78□□□□□ -0.52
SND1-201ENST00000354725 CLIP3Q96DZ5 547 aa11.78□□□□□ -0.52
SND1-201ENST00000354725 SPACA7Q96KW9 195 aa11.78□□□□□ -0.52
SND1-201ENST00000354725 BRD8Q9H0E9 1235 aa11.78□□□□□ -0.52
SND1-201ENST00000354725 GPRC5DQ9NZD1 345 aa11.78□□□□□ -0.52
SND1-201ENST00000354725 CAPN11Q9UMQ6 739 aa11.78□□□□□ -0.52
SND1-201ENST00000354725 OTOFQ9HC10 1997 aa11.77□□□□□ -0.52
SND1-201ENST00000354725 TARSL2A2RTX5 802 aaKnown RBP11.77□□□□□ -0.52
SND1-201ENST00000354725 LGALS16A8MUM7 142 aa11.77□□□□□ -0.52
SND1-201ENST00000354725 PRDM1O75626 825 aa11.77□□□□□ -0.52
SND1-201ENST00000354725 RAD17O75943 681 aa11.77□□□□□ -0.52
SND1-201ENST00000354725 TFRCP02786 760 aaKnown RBP11.77□□□□□ -0.52
SND1-201ENST00000354725 CD53P19397 219 aa11.77□□□□□ -0.52
SND1-201ENST00000354725 MATR3P43243 847 aaKnown RBP eCLIP11.77□□□□□ -0.529e-7■■■■□ 22.1
SND1-201ENST00000354725 CTCFP49711 727 aaPredicted RBP11.77□□□□□ -0.52
SND1-201ENST00000354725 CDK17Q00537 523 aa11.77□□□□□ -0.52
SND1-201ENST00000354725 PAK1Q13153 545 aa11.77□□□□□ -0.52
SND1-201ENST00000354725 SBK1Q52WX2 424 aa11.77□□□□□ -0.52
SND1-201ENST00000354725 ZNF569Q5MCW4 686 aa11.77□□□□□ -0.52
SND1-201ENST00000354725 CIAPIN1Q6FI81 312 aa11.77□□□□□ -0.52
SND1-201ENST00000354725 SPIRE2Q8WWL2 714 aa11.77□□□□□ -0.52
SND1-201ENST00000354725 ZWILCHQ9H900 591 aa11.77□□□□□ -0.52
SND1-201ENST00000354725 FLT1P17948 1338 aa11.77□□□□□ -0.53
SND1-201ENST00000354725 MAGEB6P1A0A0J9YX57 407 aa11.77□□□□□ -0.53
SND1-201ENST00000354725 KCNJ18B7U540 433 aa11.77□□□□□ -0.53
SND1-201ENST00000354725 EGFRP00533 1210 aa11.77□□□□□ -0.53
SND1-201ENST00000354725 DESP17661 470 aa11.77□□□□□ -0.53
SND1-201ENST00000354725 AFMP43652 599 aa11.77□□□□□ -0.53
SND1-201ENST00000354725 HIRAP54198 1017 aaPredicted RBP11.77□□□□□ -0.53
SND1-201ENST00000354725 KCNJ12Q14500 433 aa11.77□□□□□ -0.53
SND1-201ENST00000354725 MYOCDQ8IZQ8 938 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms