RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 SPIRE1Q08AE8 756 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 PGM5Q15124 567 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 CEP55Q53EZ4 464 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 XRRA1Q6P2D8 792 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 MAEAQ7L5Y9 396 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 SRGAP1Q7Z6B7 1085 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 CCDC26Q8TAB7 109 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 CYP2W1Q8TAV3 490 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 TATDN2Q93075 761 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 UBIAD1Q9Y5Z9 338 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 A0A1B0GUA9 196 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 PDHXO00330 501 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 MSH4O15457 936 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 SLC26A4O43511 780 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 TMEM266Q2M3C6 531 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 PRR16Q569H4 304 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 PDXDC2PQ6P474 469 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 SH2D3CQ8N5H7 860 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 C3orf20Q8ND61 904 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 FAM76AQ8TAV0 307 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 PTPN18Q99952 460 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 MXRA8Q9BRK3 442 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 MOV10L1Q9BXT6 1211 aaKnown RBP11.1□□□□□ -0.63
SYNE1-203ENST00000354674 TLL2Q9Y6L7 1015 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 SOWAHDA6NJG2 315 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 PP2D1A8MPX8 630 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 ENC1O14682 589 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 PEX10O60683 326 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 MRPS9P82933 396 aaKnown RBP11.1□□□□□ -0.63
SYNE1-203ENST00000354674 PLS1Q14651 629 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 KANK3Q6NY19 840 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 NSMFQ6X4W1 530 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 SMC1BQ8NDV3 1235 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 IL31RAQ8NI17 732 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 PDCD2LQ9BRP1 358 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 CAPS2Q9BXY5 557 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 DISC1Q9NRI5 854 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 SERTAD1Q9UHV2 236 aa11.1□□□□□ -0.63
SYNE1-203ENST00000354674 PFASO15067 1338 aa11.09□□□□□ -0.63
SYNE1-203ENST00000354674 IPO7O95373 1038 aaKnown RBP11.09□□□□□ -0.63
SYNE1-203ENST00000354674 ITGB5P18084 799 aa11.09□□□□□ -0.63
SYNE1-203ENST00000354674 Q3C1V9 767 aa11.09□□□□□ -0.63
SYNE1-203ENST00000354674 TRIM74Q86UV6 250 aa11.09□□□□□ -0.63
SYNE1-203ENST00000354674 TRIM73Q86UV7 250 aa11.09□□□□□ -0.63
SYNE1-203ENST00000354674 SHCBP1Q8NEM2 672 aa11.09□□□□□ -0.63
SYNE1-203ENST00000354674 SLC5A5Q92911 643 aa11.09□□□□□ -0.63
SYNE1-203ENST00000354674 HHIPL1Q96JK4 782 aa11.09□□□□□ -0.63
SYNE1-203ENST00000354674 RMDN3Q96TC7 470 aa11.09□□□□□ -0.63
SYNE1-203ENST00000354674 CRACR2AQ9BSW2 395 aa11.09□□□□□ -0.63
SYNE1-203ENST00000354674 RAB34Q9BZG1 259 aa11.09□□□□□ -0.63
SYNE1-203ENST00000354674 KIAA1468Q9P260 1216 aa11.09□□□□□ -0.63
SYNE1-203ENST00000354674 TUBE1Q9UJT0 475 aa11.09□□□□□ -0.63
SYNE1-203ENST00000354674 VAV3Q9UKW4 847 aa11.09□□□□□ -0.63
SYNE1-203ENST00000354674 PCDHA12Q9UN75 941 aa11.09□□□□□ -0.63
SYNE1-203ENST00000354674 CDC25AP30304 524 aa11.09□□□□□ -0.63
SYNE1-203ENST00000354674 SEC24CP53992 1094 aa11.09□□□□□ -0.63
SYNE1-203ENST00000354674 NAALADL2Q58DX5 795 aa11.09□□□□□ -0.63
SYNE1-203ENST00000354674 HYIQ5T013 277 aa11.09□□□□□ -0.63
SYNE1-203ENST00000354674 NT5DC1Q5TFE4 455 aa11.09□□□□□ -0.63
SYNE1-203ENST00000354674 RGMBQ6NW40 437 aa11.09□□□□□ -0.63
SYNE1-203ENST00000354674 SPATA20Q8TB22 786 aa11.09□□□□□ -0.63
SYNE1-203ENST00000354674 ITFG2Q969R8 447 aa11.09□□□□□ -0.63
SYNE1-203ENST00000354674 CCDC114Q96M63 670 aa11.09□□□□□ -0.63
SYNE1-203ENST00000354674 LRWD1Q9UFC0 647 aa11.09□□□□□ -0.63
SYNE1-203ENST00000354674 SRGAP2O75044 1071 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 SLC10A3P09131 477 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 ZNF76P36508 570 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 UBA7P41226 1012 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 UBXN2AP68543 259 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 ADCY2Q08462 1091 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 GNPTABQ3T906 1256 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 PREPLQ4J6C6 727 aaPredicted RBP11.08□□□□□ -0.64
SYNE1-203ENST00000354674 B3GNT9Q6UX72 402 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 CABP7Q86V35 215 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 VSIG10LQ86VR7 867 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 DNERQ8NFT8 737 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 GJA10Q969M2 543 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 PURBQ96QR8 312 aaKnown RBP11.08□□□□□ -0.64
SYNE1-203ENST00000354674 JADE2Q9NQC1 790 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 MORF4L1Q9UBU8 362 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 FAM155AB1AL88 458 aaPredicted RBP11.08□□□□□ -0.64
SYNE1-203ENST00000354674 PSMD10O75832 226 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 CYP2C8P10632 490 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 ERCC3P19447 782 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 SARSP49591 514 aaKnown RBP11.08□□□□□ -0.64
SYNE1-203ENST00000354674 ERVK-9P63128 1117 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 ERVK-24P63145 666 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 MKRN3Q13064 507 aaKnown RBP11.08□□□□□ -0.64
SYNE1-203ENST00000354674 STIM1Q13586 685 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 CCDC40Q4G0X9 1142 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 NSUN6Q8TEA1 469 aaKnown RBP11.08□□□□□ -0.64
SYNE1-203ENST00000354674 LRRC15Q8TF66 581 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 PAGE5Q96GU1 130 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 SH3GL3Q99963 347 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 TACO1Q9BSH4 297 aaKnown RBP11.08□□□□□ -0.64
SYNE1-203ENST00000354674 FAM167BQ9BTA0 163 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 CUEDC2Q9H467 287 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 IMPACTQ9P2X3 320 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 POTEMA6NI47 508 aa11.08□□□□□ -0.64
SYNE1-203ENST00000354674 GCLCP48506 637 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms