RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 RNF38Q9H0F5 515 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 C14orf93Q9H972 538 aaKnown RBP2.04□□□□□ -2.08
BRCA1-202ENST00000354071 PRDM5Q9NQX1 630 aaPredicted RBP2.04□□□□□ -2.08
BRCA1-202ENST00000354071 ERVK13-1Q9NX77 482 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 PCDHGB2Q9Y5G2 931 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 CAPN6Q9Y6Q1 641 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 H7C1D1 291 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 hCG_1984214I3L0E3 225 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 UBXN7O94888 489 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 CFBP00751 764 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 MSL3P1P0C860 447 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 SETSIPP0DME0 302 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 GNAT1P11488 350 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 PDCP20941 246 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 ETV3P41162 512 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 PPM1FP49593 454 aaPredicted RBP2.04□□□□□ -2.08
BRCA1-202ENST00000354071 SEMA5AQ13591 1074 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 NFKBIBQ15653 356 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 CRY1Q16526 586 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 NKPD1Q17RQ9 610 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 FAM26FQ5R3K3 315 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 LDHAL6AQ6ZMR3 332 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 C16orf59Q7L2K0 433 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 PTCHD1Q96NR3 888 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 ORAI2Q96SN7 254 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 SYT3Q9BQG1 590 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 PCIF1Q9H4Z3 704 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 GPATCH2Q9NW75 528 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 NRBP1Q9UHY1 535 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 FBXO9Q9UK97 447 aaPredicted RBP2.04□□□□□ -2.08
BRCA1-202ENST00000354071 SPEF1Q9Y4P9 236 aa2.04□□□□□ -2.08
BRCA1-202ENST00000354071 PRSS38A1L453 326 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 HMX2A2RU54 273 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 TISP43B9A030 160 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 B9A039 149 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 FAM47E-STBD1D6RA91 191 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 CROCC2H7BZ55 1655 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 B3GALT2O43825 422 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 GAS2O43903 313 aaKnown RBP2.03□□□□□ -2.08
BRCA1-202ENST00000354071 BMP8BP34820 402 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 TM4SF4P48230 202 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 SARSP49591 514 aaKnown RBP2.03□□□□□ -2.08
BRCA1-202ENST00000354071 CLEC16AQ2KHT3 1053 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 FAM47CQ5HY64 1035 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 RTN4RL1Q86UN2 441 aaPredicted RBP2.03□□□□□ -2.08
BRCA1-202ENST00000354071 CXorf67Q86X51 503 aaPredicted RBP2.03□□□□□ -2.08
BRCA1-202ENST00000354071 TMTC2Q8N394 836 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 PAF1Q8N7H5 531 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 COA7Q96BR5 231 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 CCDC138Q96M89 665 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 RIPOR3Q96MK2 946 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 NEUROD6Q96NK8 337 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 KCNF1Q9H3M0 494 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 ZSWIM5Q9P217 1185 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 USP21Q9UK80 565 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 TMPRSS11EQ9UL52 423 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 PLA2G2DQ9UNK4 145 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 GPR52Q9Y2T5 361 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 MAP3K4Q9Y6R4 1608 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 BIVM-ERCC5R4GMW8 1640 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.03□□□□□ -2.08
BRCA1-202ENST00000354071 SLC12A8A0AV02 714 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 WNT10BO00744 389 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 SLC27A2O14975 620 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 ZNF205O95201 554 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 FUCA1P04066 466 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 GSNP06396 782 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 PYGLP06737 847 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 MMEP08473 750 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 SRFP11831 508 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 ZKSCAN1P17029 563 aaPredicted RBP2.03□□□□□ -2.08
BRCA1-202ENST00000354071 PAMP19021 973 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 ENPP1P22413 925 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 MC4RP32245 332 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 MANFP55145 182 aaKnown RBP2.03□□□□□ -2.08
BRCA1-202ENST00000354071 PHC1P78364 1004 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 MOGSQ13724 837 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 SFRP5Q5T4F7 317 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 EEF1DP3Q658K8 133 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 CPXCR1Q8N123 301 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 MIER2Q8N344 545 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 MYCT1Q8N699 235 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 ZNF610Q8N9Z0 462 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 TNIP3Q96KP6 325 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 ZMAT3Q9HA38 289 aaKnown RBP2.03□□□□□ -2.08
BRCA1-202ENST00000354071 ATP6V0A4Q9HBG4 840 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 MKL2Q9ULH7 1088 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 NSFL1CQ9UNZ2 370 aaKnown RBP2.03□□□□□ -2.08
BRCA1-202ENST00000354071 GPR45Q9Y5Y3 372 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 TTBK1Q5TCY1 1321 aaPredicted RBP2.03□□□□□ -2.08
BRCA1-202ENST00000354071 CCDC154A6NI56 674 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 C22orf46C9J442 243 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 ERC2O15083 957 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 HSPA6P17066 643 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 TNFSF4P23510 183 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 RPL10P27635 214 aaKnown RBP2.03□□□□□ -2.08
BRCA1-202ENST00000354071 MAP4P27816 1152 aaKnown RBP2.03□□□□□ -2.08
BRCA1-202ENST00000354071 TPP2P29144 1249 aaPredicted RBP2.03□□□□□ -2.08
BRCA1-202ENST00000354071 AK2P54819 239 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 LGALS4P56470 323 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms