RNA–Protein interactions for RNA: ENST00000349995.9

COG3-201, Transcript of component of oligomeric golgi complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COG3, Length 4,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-201ENST00000349995 USP4Q13107 963 aa16.28■□□□□ 0.2
COG3-201ENST00000349995 RASGRP4Q8TDF6 673 aa16.28■□□□□ 0.2
COG3-201ENST00000349995 ZNF653Q96CK0 615 aa16.28■□□□□ 0.2
COG3-201ENST00000349995 NMD3Q96D46 503 aaKnown RBP16.28■□□□□ 0.2
COG3-201ENST00000349995 MINPP1Q9UNW1 487 aa16.28■□□□□ 0.2
COG3-201ENST00000349995 PXDNLA1KZ92 1463 aa16.28■□□□□ 0.2
COG3-201ENST00000349995 RASA4BC9J798 803 aa16.28■□□□□ 0.2
COG3-201ENST00000349995 SEMA3EO15041 775 aa16.28■□□□□ 0.2
COG3-201ENST00000349995 RASA4O43374 803 aa16.28■□□□□ 0.2
COG3-201ENST00000349995 UBOX5O94941 541 aa16.28■□□□□ 0.2
COG3-201ENST00000349995 ATP4AP20648 1035 aa16.28■□□□□ 0.2
COG3-201ENST00000349995 COPS2P61201 443 aa16.28■□□□□ 0.2
COG3-201ENST00000349995 ACCSLQ4AC99 568 aa16.28■□□□□ 0.2
COG3-201ENST00000349995 EAPPQ56P03 285 aaPredicted RBP16.28■□□□□ 0.2
COG3-201ENST00000349995 PALM2Q8IXS6 379 aa16.28■□□□□ 0.2
COG3-201ENST00000349995 PPWD1Q96BP3 646 aaKnown RBP16.28■□□□□ 0.2
COG3-201ENST00000349995 DYNLL2Q96FJ2 89 aa16.28■□□□□ 0.2
COG3-201ENST00000349995 BCAP29Q9UHQ4 241 aa16.28■□□□□ 0.2
COG3-201ENST00000349995 SOS2Q07890 1332 aaPredicted RBP16.28■□□□□ 0.2
COG3-201ENST00000349995 PSMC1P62191 440 aaKnown RBP16.28■□□□□ 0.2
COG3-201ENST00000349995 MED21Q13503 144 aa16.28■□□□□ 0.2
COG3-201ENST00000349995 ANKRD20A2Q5SQ80 823 aa16.28■□□□□ 0.2
COG3-201ENST00000349995 ANKRD20A1Q5TYW2 823 aa16.28■□□□□ 0.2
COG3-201ENST00000349995 TBC1D9BQ66K14 1250 aa16.28■□□□□ 0.2
COG3-201ENST00000349995 EZH1Q92800 747 aaPredicted RBP16.28■□□□□ 0.2
COG3-201ENST00000349995 QTRT2Q9H974 415 aaKnown RBP16.28■□□□□ 0.2
COG3-201ENST00000349995 PPARGC1AQ9UBK2 798 aaKnown RBP16.28■□□□□ 0.2
COG3-201ENST00000349995 SRPRBQ9Y5M8 271 aaKnown RBP16.28■□□□□ 0.2
COG3-201ENST00000349995 NEDD4P46934 1319 aa16.28■□□□□ 0.2
COG3-201ENST00000349995 MECOMQ03112 1051 aa16.27■□□□□ 0.2
COG3-201ENST00000349995 TRPC3Q13507 836 aa16.27■□□□□ 0.2
COG3-201ENST00000349995 ZYXQ15942 572 aaKnown RBP16.27■□□□□ 0.2
COG3-201ENST00000349995 PAF1Q8N7H5 531 aa16.27■□□□□ 0.2
COG3-201ENST00000349995 PRCCQ92733 491 aaPredicted RBP16.27■□□□□ 0.2
COG3-201ENST00000349995 TMEM60Q9H2L4 133 aa16.27■□□□□ 0.2
COG3-201ENST00000349995 TYW1Q9NV66 732 aaKnown RBP16.27■□□□□ 0.2
COG3-201ENST00000349995 NUB1Q9Y5A7 615 aa16.27■□□□□ 0.2
COG3-201ENST00000349995 EXOC1LA0A1B0GW35 172 aa16.27■□□□□ 0.2
COG3-201ENST00000349995 KLRF2D3W0D1 207 aa16.27■□□□□ 0.2
COG3-201ENST00000349995 PSMD14O00487 310 aa16.27■□□□□ 0.2
COG3-201ENST00000349995 SERPINB2P05120 415 aa16.27■□□□□ 0.2
COG3-201ENST00000349995 ERMNQ8TAM6 284 aa16.27■□□□□ 0.2
COG3-201ENST00000349995 AGAP11Q8TF27 550 aa16.27■□□□□ 0.2
COG3-201ENST00000349995 MTRQ99707 1265 aa16.27■□□□□ 0.2
COG3-201ENST00000349995 NDST4Q9H3R1 872 aa16.27■□□□□ 0.2
COG3-201ENST00000349995 USP40Q9NVE5 1235 aa16.27■□□□□ 0.2
COG3-201ENST00000349995 BSDC1Q9NW68 430 aaPredicted RBP16.27■□□□□ 0.2
COG3-201ENST00000349995 ADD3Q9UEY8 706 aaKnown RBP16.27■□□□□ 0.2
COG3-201ENST00000349995 MCF2LO15068 1137 aa16.27■□□□□ 0.19
COG3-201ENST00000349995 AHCYL1O43865 530 aa16.27■□□□□ 0.19
COG3-201ENST00000349995 S100BP04271 92 aaPredicted RBP16.27■□□□□ 0.19
COG3-201ENST00000349995 SCG2P13521 617 aa16.27■□□□□ 0.19
COG3-201ENST00000349995 IFNAR1P17181 557 aa16.27■□□□□ 0.19
COG3-201ENST00000349995 LRRC41Q15345 812 aa16.27■□□□□ 0.19
COG3-201ENST00000349995 NANOGNBQ7Z5D8 188 aa16.27■□□□□ 0.19
COG3-201ENST00000349995 LRRC47Q8N1G4 583 aaKnown RBP16.27■□□□□ 0.19
COG3-201ENST00000349995 TUBB6Q9BUF5 446 aa16.27■□□□□ 0.19
COG3-201ENST00000349995 CHRM1P11229 460 aaPredicted RBP16.27■□□□□ 0.19
COG3-201ENST00000349995 KRT10P13645 584 aa16.27■□□□□ 0.19
COG3-201ENST00000349995 PTPREP23469 700 aa16.27■□□□□ 0.19
COG3-201ENST00000349995 CUL4BQ13620 913 aa16.27■□□□□ 0.19
COG3-201ENST00000349995 RABGAP1LQ5R372 815 aa16.27■□□□□ 0.19
COG3-201ENST00000349995 KIAA2013Q8IYS2 634 aa16.27■□□□□ 0.19
COG3-201ENST00000349995 MYOCDQ8IZQ8 938 aa16.27■□□□□ 0.19
COG3-201ENST00000349995 MARCH10Q8NA82 808 aaPredicted RBP16.27■□□□□ 0.19
COG3-201ENST00000349995 CCDC124Q96CT7 223 aaKnown RBP16.27■□□□□ 0.19
COG3-201ENST00000349995 ATP8A2Q9NTI2 1148 aa16.27■□□□□ 0.19
COG3-201ENST00000349995 DBR1Q9UK59 544 aaKnown RBP16.27■□□□□ 0.19
COG3-201ENST00000349995 FAM13AO94988 1023 aa16.26■□□□□ 0.19
COG3-201ENST00000349995 Q4G0T1 1027 aa16.26■□□□□ 0.19
COG3-201ENST00000349995 CLEC4GQ6UXB4 293 aa16.26■□□□□ 0.19
COG3-201ENST00000349995 NUDCD3Q8IVD9 361 aa16.26■□□□□ 0.19
COG3-201ENST00000349995 MB21D2Q8IYB1 491 aaPredicted RBP16.26■□□□□ 0.19
COG3-201ENST00000349995 RDH13Q8NBN7 331 aa16.26■□□□□ 0.19
COG3-201ENST00000349995 JDP2Q8WYK2 163 aa16.26■□□□□ 0.19
COG3-201ENST00000349995 LIMA1Q9UHB6 759 aaKnown RBP16.26■□□□□ 0.19
COG3-201ENST00000349995 THRAP3Q9Y2W1 955 aaKnown RBP16.26■□□□□ 0.19
COG3-201ENST00000349995 ZBBXA8MT70 800 aa16.26■□□□□ 0.19
COG3-201ENST00000349995 KRT5P13647 590 aa16.26■□□□□ 0.19
COG3-201ENST00000349995 RPS6KA3P51812 740 aa16.26■□□□□ 0.19
COG3-201ENST00000349995 ELF3P78545 371 aaPredicted RBP16.26■□□□□ 0.19
COG3-201ENST00000349995 SPARCL1Q14515 664 aa16.26■□□□□ 0.19
COG3-201ENST00000349995 TNIP1Q15025 636 aa16.26■□□□□ 0.19
COG3-201ENST00000349995 ARMCX3Q9UH62 379 aaPredicted RBP16.26■□□□□ 0.19
COG3-201ENST00000349995 FRMPD2Q68DX3 1309 aaPredicted RBP16.26■□□□□ 0.19
COG3-201ENST00000349995 LRRC53A6NM62 1247 aa16.26■□□□□ 0.19
COG3-201ENST00000349995 AP2B1P63010 937 aa16.26■□□□□ 0.19
COG3-201ENST00000349995 DDR1Q08345 913 aa16.26■□□□□ 0.19
COG3-201ENST00000349995 NONOQ15233 471 aaKnown RBP eCLIP16.26■□□□□ 0.19
COG3-201ENST00000349995 MAN2A1Q16706 1144 aa16.26■□□□□ 0.19
COG3-201ENST00000349995 TSGA10IPQ3SY00 556 aa16.26■□□□□ 0.19
COG3-201ENST00000349995 TRAPPC11Q7Z392 1133 aa16.26■□□□□ 0.19
COG3-201ENST00000349995 SLC26A7Q8TE54 656 aa16.26■□□□□ 0.19
COG3-201ENST00000349995 HDAC7Q8WUI4 952 aa16.26■□□□□ 0.19
COG3-201ENST00000349995 KIFC2Q96AC6 838 aa16.26■□□□□ 0.19
COG3-201ENST00000349995 UBAP1Q9NZ09 502 aa16.26■□□□□ 0.19
COG3-201ENST00000349995 DUSP10Q9Y6W6 482 aa16.26■□□□□ 0.19
COG3-201ENST00000349995 SMCO2A6NFE2 343 aa16.25■□□□□ 0.19
COG3-201ENST00000349995 KIF28PB7ZC32 967 aa16.25■□□□□ 0.19
COG3-201ENST00000349995 GMNNO75496 209 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms