RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 SH3RF1Q7Z6J0 888 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 C14orf80Q86SX3 495 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 MICU3Q86XE3 530 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 RIBC1Q8N443 379 aaPredicted RBP11.53□□□□□ -0.56
CAPN3-203ENST00000349748 FAM133AQ8N9E0 248 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 NMD3Q96D46 503 aaKnown RBP11.53□□□□□ -0.56
CAPN3-203ENST00000349748 INPP4AQ96PE3 977 aaPredicted RBP11.53□□□□□ -0.56
CAPN3-203ENST00000349748 DBNDD2Q9BQY9 259 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 SIKE1Q9BRV8 207 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 MYL10Q9BUA6 226 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 DSCC1Q9BVC3 393 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 TRIM31Q9BZY9 425 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 DPH5Q9H2P9 285 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 HAO1Q9UJM8 370 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 MYH7BA7E2Y1 1941 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 IGKV5-2P06315 115 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 ZFXP17010 805 aaPredicted RBP11.53□□□□□ -0.56
CAPN3-203ENST00000349748 ITGA6P23229 1130 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 VHLP40337 213 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 SLCO1A2P46721 670 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 MAP7D1Q3KQU3 841 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 SH2D4BQ5SQS7 431 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 ZNF362Q5T0B9 420 aaPredicted RBP11.53□□□□□ -0.56
CAPN3-203ENST00000349748 TMEM53Q6P2H8 277 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 MAP7D3Q8IWC1 876 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 USP38Q8NB14 1042 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 SYMPKQ92797 1274 aaKnown RBP11.53□□□□□ -0.56
CAPN3-203ENST00000349748 ABHD8Q96I13 439 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 MPP4Q96JB8 637 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 NOX5Q96PH1 765 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 TUBGCP5Q96RT8 1024 aa11.53□□□□□ -0.56
CAPN3-203ENST00000349748 PUS3Q9BZE2 481 aaKnown RBP11.53□□□□□ -0.56
CAPN3-203ENST00000349748 DDX47Q9H0S4 455 aaKnown RBP11.53□□□□□ -0.56
CAPN3-203ENST00000349748 SRPRBQ9Y5M8 271 aaKnown RBP11.53□□□□□ -0.56
CAPN3-203ENST00000349748 NKRFO15226 690 aaKnown RBP eCLIP11.52□□□□□ -0.56
CAPN3-203ENST00000349748 GNAT2P19087 354 aa11.52□□□□□ -0.56
CAPN3-203ENST00000349748 SLC1A4P43007 532 aa11.52□□□□□ -0.56
CAPN3-203ENST00000349748 METAP2P50579 478 aaKnown RBP eCLIP11.52□□□□□ -0.56
CAPN3-203ENST00000349748 GFPT1Q06210 699 aaPredicted RBP11.52□□□□□ -0.56
CAPN3-203ENST00000349748 KHDC1Q4VXA5 237 aaKnown RBP11.52□□□□□ -0.56
CAPN3-203ENST00000349748 UBAP2Q5T6F2 1119 aaKnown RBP11.52□□□□□ -0.56
CAPN3-203ENST00000349748 SPATA24Q86W54 205 aa11.52□□□□□ -0.56
CAPN3-203ENST00000349748 NKX2-3Q8TAU0 364 aa11.52□□□□□ -0.56
CAPN3-203ENST00000349748 LZICQ8WZA0 190 aa11.52□□□□□ -0.56
CAPN3-203ENST00000349748 CIDEBQ9UHD4 219 aa11.52□□□□□ -0.56
CAPN3-203ENST00000349748 R3HDM2Q9Y2K5 976 aaKnown RBP11.52□□□□□ -0.56
CAPN3-203ENST00000349748 ARL2BPQ9Y2Y0 163 aa11.52□□□□□ -0.56
CAPN3-203ENST00000349748 SPATA31A6Q5VVP1 1343 aa11.52□□□□□ -0.56
CAPN3-203ENST00000349748 LMO7Q8WWI1 1683 aa11.52□□□□□ -0.56
CAPN3-203ENST00000349748 RANBP6O60518 1105 aaKnown RBP11.52□□□□□ -0.57
CAPN3-203ENST00000349748 LYNP07948 512 aa11.52□□□□□ -0.57
CAPN3-203ENST00000349748 PRCPP42785 496 aa11.52□□□□□ -0.57
CAPN3-203ENST00000349748 CLCN2P51788 898 aa11.52□□□□□ -0.57
CAPN3-203ENST00000349748 CDK17Q00537 523 aa11.52□□□□□ -0.57
CAPN3-203ENST00000349748 GSTM4Q03013 218 aa11.52□□□□□ -0.57
CAPN3-203ENST00000349748 DIS3L2Q8IYB7 885 aaKnown RBP11.52□□□□□ -0.57
CAPN3-203ENST00000349748 TBC1D16Q8TBP0 767 aa11.52□□□□□ -0.57
CAPN3-203ENST00000349748 CLIP3Q96DZ5 547 aa11.52□□□□□ -0.57
CAPN3-203ENST00000349748 CTNNAL1Q9UBT7 734 aa11.52□□□□□ -0.57
CAPN3-203ENST00000349748 HEY1Q9Y5J3 304 aa11.52□□□□□ -0.57
CAPN3-203ENST00000349748 PDS5AQ29RF7 1337 aaKnown RBP11.52□□□□□ -0.57
CAPN3-203ENST00000349748 GJB6O95452 261 aa11.52□□□□□ -0.57
CAPN3-203ENST00000349748 GUCY1A2P33402 732 aa11.52□□□□□ -0.57
CAPN3-203ENST00000349748 NEK3P51956 506 aa11.52□□□□□ -0.57
CAPN3-203ENST00000349748 SH3D19Q5HYK7 790 aa11.52□□□□□ -0.57
CAPN3-203ENST00000349748 SOGA3Q5TF21 947 aa11.52□□□□□ -0.57
CAPN3-203ENST00000349748 HAUS1Q96CS2 278 aa11.52□□□□□ -0.57
CAPN3-203ENST00000349748 RNF14Q9UBS8 474 aa11.52□□□□□ -0.57
CAPN3-203ENST00000349748 AMACRQ9UHK6 382 aa11.52□□□□□ -0.57
CAPN3-203ENST00000349748 BCL9O00512 1426 aa11.52□□□□□ -0.57
CAPN3-203ENST00000349748 XDHP47989 1333 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 SRGNP10124 158 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 ADARP55265 1226 aaKnown RBP11.51□□□□□ -0.57
CAPN3-203ENST00000349748 CABP4P57796 275 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 PDIA6Q15084 440 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 RCN1Q15293 331 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 PKN1Q16512 942 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 SMUG1Q53HV7 270 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 FAM182BQ5T319 152 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 ECHDC2Q86YB7 292 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 KBTBD2Q8IY47 623 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 KBTBD3Q8NAB2 608 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 DTX3LQ8TDB6 740 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 IQCDQ96DY2 449 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 TBC1D10AQ9BXI6 508 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 FAM114A2Q9NRY5 505 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.51□□□□□ -0.57
CAPN3-203ENST00000349748 HEG1Q9ULI3 1381 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 EPHB6O15197 1021 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 RGS16O15492 202 aaPredicted RBP11.51□□□□□ -0.57
CAPN3-203ENST00000349748 RAD21O60216 631 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 VAV1P15498 845 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 TFCP2Q12800 502 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 CNGA2Q16280 664 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 ZNF449Q6P9G9 518 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 RFWD3Q6PCD5 774 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 C16orf87Q6PH81 154 aa11.51□□□□□ -0.57
CAPN3-203ENST00000349748 MB21D2Q8IYB1 491 aaPredicted RBP11.51□□□□□ -0.57
CAPN3-203ENST00000349748 ZNF579Q8NAF0 562 aaKnown RBP11.51□□□□□ -0.57
CAPN3-203ENST00000349748 SLC26A6Q9BXS9 759 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms