RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 PCDHA13Q9Y5I0 950 aa22.38■■□□□ 1.17
CHRNA3-202ENST00000348639 LOXHD1Q8IVV2 1947 aa22.37■■□□□ 1.17
CHRNA3-202ENST00000348639 ASTE1Q2TB18 679 aaPredicted RBP22.37■■□□□ 1.17
CHRNA3-202ENST00000348639 TEX35Q5T0J7 233 aa22.37■■□□□ 1.17
CHRNA3-202ENST00000348639 SFMBT2Q5VUG0 894 aa22.37■■□□□ 1.17
CHRNA3-202ENST00000348639 FAM178BQ8IXR5 827 aa22.37■■□□□ 1.17
CHRNA3-202ENST00000348639 RMDN3Q96TC7 470 aa22.37■■□□□ 1.17
CHRNA3-202ENST00000348639 PDCD2LQ9BRP1 358 aa22.37■■□□□ 1.17
CHRNA3-202ENST00000348639 PXMP2Q9NR77 195 aa22.37■■□□□ 1.17
CHRNA3-202ENST00000348639 MYO6Q9UM54 1294 aa22.37■■□□□ 1.17
CHRNA3-202ENST00000348639 AKR1B10O60218 316 aa22.36■■□□□ 1.17
CHRNA3-202ENST00000348639 USO1O60763 962 aaKnown RBP22.36■■□□□ 1.17
CHRNA3-202ENST00000348639 ZC2HC1CQ53FD0 456 aaPredicted RBP22.36■■□□□ 1.17
CHRNA3-202ENST00000348639 GANQ9H2C0 597 aa22.36■■□□□ 1.17
CHRNA3-202ENST00000348639 ARGLU1Q9NWB6 273 aaPredicted RBP22.36■■□□□ 1.17
CHRNA3-202ENST00000348639 RIPK3Q9Y572 518 aa22.36■■□□□ 1.17
CHRNA3-202ENST00000348639 PARP14Q460N5 1801 aa22.36■■□□□ 1.17
CHRNA3-202ENST00000348639 C19orf81C9J6K1 198 aa22.36■■□□□ 1.17
CHRNA3-202ENST00000348639 CLIC2O15247 247 aa22.36■■□□□ 1.17
CHRNA3-202ENST00000348639 MYCLP12524 364 aaPredicted RBP22.36■■□□□ 1.17
CHRNA3-202ENST00000348639 TUBB4BP68371 445 aa22.36■■□□□ 1.17
CHRNA3-202ENST00000348639 ODR4Q5SWX8 454 aa22.36■■□□□ 1.17
CHRNA3-202ENST00000348639 PLCB1Q9NQ66 1216 aa22.36■■□□□ 1.17
CHRNA3-202ENST00000348639 DDX41Q9UJV9 622 aaKnown RBP22.36■■□□□ 1.17
CHRNA3-202ENST00000348639 DBR1Q9UK59 544 aaKnown RBP22.36■■□□□ 1.17
CHRNA3-202ENST00000348639 LYPLA2O95372 231 aa22.35■■□□□ 1.17
CHRNA3-202ENST00000348639 SERPING1P05155 500 aa22.35■■□□□ 1.17
CHRNA3-202ENST00000348639 CASP4P49662 377 aa22.35■■□□□ 1.17
CHRNA3-202ENST00000348639 CLCN6P51797 869 aa22.35■■□□□ 1.17
CHRNA3-202ENST00000348639 OAZ1P54368 228 aa22.35■■□□□ 1.17
CHRNA3-202ENST00000348639 MAPK7Q13164 816 aa22.35■■□□□ 1.17
CHRNA3-202ENST00000348639 SLC9C1Q4G0N8 1177 aa22.35■■□□□ 1.17
CHRNA3-202ENST00000348639 PADI6Q6TGC4 694 aa22.35■■□□□ 1.17
CHRNA3-202ENST00000348639 TRAPPC11Q7Z392 1133 aa22.35■■□□□ 1.17
CHRNA3-202ENST00000348639 REPS2Q8NFH8 660 aa22.35■■□□□ 1.17
CHRNA3-202ENST00000348639 RNF146Q9NTX7 359 aa22.35■■□□□ 1.17
CHRNA3-202ENST00000348639 ADAMTS5Q9UNA0 930 aa22.35■■□□□ 1.17
CHRNA3-202ENST00000348639 PCDHB13Q9Y5F0 798 aa22.35■■□□□ 1.17
CHRNA3-202ENST00000348639 PPP2R3BQ9Y5P8 575 aa22.35■■□□□ 1.17
CHRNA3-202ENST00000348639 DUSP10Q9Y6W6 482 aa22.35■■□□□ 1.17
CHRNA3-202ENST00000348639 TLR2O60603 784 aa22.35■■□□□ 1.17
CHRNA3-202ENST00000348639 HIP1RO75146 1068 aa22.35■■□□□ 1.17
CHRNA3-202ENST00000348639 DDNO94850 711 aaPredicted RBP22.35■■□□□ 1.17
CHRNA3-202ENST00000348639 QARSP47897 775 aaKnown RBP22.35■■□□□ 1.17
CHRNA3-202ENST00000348639 ARHGEF16Q5VV41 709 aa22.35■■□□□ 1.17
CHRNA3-202ENST00000348639 XRRA1Q6P2D8 792 aa22.35■■□□□ 1.17
CHRNA3-202ENST00000348639 SECISBP2LQ93073 1101 aaKnown RBP22.35■■□□□ 1.17
CHRNA3-202ENST00000348639 BORCS6Q96GS4 357 aa22.35■■□□□ 1.17
CHRNA3-202ENST00000348639 PUF60Q9UHX1 559 aaKnown RBP22.35■■□□□ 1.17
CHRNA3-202ENST00000348639 SAMM50Q9Y512 469 aa22.35■■□□□ 1.17
CHRNA3-202ENST00000348639 DSG3P32926 999 aa22.34■■□□□ 1.17
CHRNA3-202ENST00000348639 APBA1Q02410 837 aa22.34■■□□□ 1.17
CHRNA3-202ENST00000348639 SUPT20HL1Q3ZLR7 823 aa22.34■■□□□ 1.17
CHRNA3-202ENST00000348639 PAPD7Q5XG87 772 aaKnown RBP22.34■■□□□ 1.17
CHRNA3-202ENST00000348639 SNRNP48Q6IEG0 339 aaKnown RBP22.34■■□□□ 1.17
CHRNA3-202ENST00000348639 DPY19L2P1Q6NXN4 242 aa22.34■■□□□ 1.17
CHRNA3-202ENST00000348639 DAW1Q8N136 415 aa22.34■■□□□ 1.17
CHRNA3-202ENST00000348639 SLC35C1Q96A29 364 aa22.34■■□□□ 1.17
CHRNA3-202ENST00000348639 MKNK1Q9BUB5 465 aa22.34■■□□□ 1.17
CHRNA3-202ENST00000348639 STRA6Q9BX79 667 aa22.34■■□□□ 1.17
CHRNA3-202ENST00000348639 AIPL1Q9NZN9 384 aa22.34■■□□□ 1.17
CHRNA3-202ENST00000348639 ANO9A1A5B4 782 aa22.33■■□□□ 1.17
CHRNA3-202ENST00000348639 RBAK-RBAKDNI3L0D1 243 aa22.33■■□□□ 1.17
CHRNA3-202ENST00000348639 PSMC2P35998 433 aaKnown RBP22.33■■□□□ 1.17
CHRNA3-202ENST00000348639 EXOC3L4Q17RC7 722 aa22.33■■□□□ 1.17
CHRNA3-202ENST00000348639 TDRD12Q587J7 1177 aaKnown RBP22.33■■□□□ 1.17
CHRNA3-202ENST00000348639 DCAF17Q5H9S7 520 aaPredicted RBP22.33■■□□□ 1.17
CHRNA3-202ENST00000348639 DLK2Q6UY11 383 aa22.33■■□□□ 1.17
CHRNA3-202ENST00000348639 HS2ST1Q7LGA3 356 aa22.33■■□□□ 1.17
CHRNA3-202ENST00000348639 SPON1Q9HCB6 807 aa22.33■■□□□ 1.17
CHRNA3-202ENST00000348639 ZNF446Q9NWS9 450 aa22.33■■□□□ 1.17
CHRNA3-202ENST00000348639 TMOD4Q9NZQ9 345 aa22.33■■□□□ 1.17
CHRNA3-202ENST00000348639 OGFRQ9NZT2 677 aa22.33■■□□□ 1.17
CHRNA3-202ENST00000348639 RARRES1P49788 294 aa22.33■■□□□ 1.16
CHRNA3-202ENST00000348639 BAATQ14032 418 aaPredicted RBP22.33■■□□□ 1.16
CHRNA3-202ENST00000348639 COG2Q14746 738 aa22.33■■□□□ 1.16
CHRNA3-202ENST00000348639 TXLNBQ8N3L3 684 aa22.33■■□□□ 1.16
CHRNA3-202ENST00000348639 FHDC1Q9C0D6 1143 aaPredicted RBP22.33■■□□□ 1.16
CHRNA3-202ENST00000348639 GBP3Q9H0R5 595 aa22.33■■□□□ 1.16
CHRNA3-202ENST00000348639 SSC5DA1L4H1 1573 aa22.32■■□□□ 1.16
CHRNA3-202ENST00000348639 RLFQ13129 1914 aa22.32■■□□□ 1.16
CHRNA3-202ENST00000348639 MACROD2A1Z1Q3 448 aa22.32■■□□□ 1.16
CHRNA3-202ENST00000348639 ENC1O14682 589 aa22.32■■□□□ 1.16
CHRNA3-202ENST00000348639 PJA2O43164 708 aa22.32■■□□□ 1.16
CHRNA3-202ENST00000348639 PPP1R37O75864 691 aa22.32■■□□□ 1.16
CHRNA3-202ENST00000348639 ATP1A1P05023 1023 aaKnown RBP22.32■■□□□ 1.16
CHRNA3-202ENST00000348639 ZSCAN20P17040 1043 aaPredicted RBP22.32■■□□□ 1.16
CHRNA3-202ENST00000348639 PON1P27169 355 aa22.32■■□□□ 1.16
CHRNA3-202ENST00000348639 MAGEA1P43355 309 aa22.32■■□□□ 1.16
CHRNA3-202ENST00000348639 NOL9Q5SY16 702 aaKnown RBP22.32■■□□□ 1.16
CHRNA3-202ENST00000348639 GOLGA5Q8TBA6 731 aa22.32■■□□□ 1.16
CHRNA3-202ENST00000348639 EPC1Q9H2F5 836 aa22.32■■□□□ 1.16
CHRNA3-202ENST00000348639 IKZF4Q9H2S9 585 aa22.32■■□□□ 1.16
CHRNA3-202ENST00000348639 DMAC2Q9NW81 257 aa22.32■■□□□ 1.16
CHRNA3-202ENST00000348639 ZNF214Q9UL59 606 aaPredicted RBP22.32■■□□□ 1.16
CHRNA3-202ENST00000348639 SAR1BQ9Y6B6 198 aa22.32■■□□□ 1.16
CHRNA3-202ENST00000348639 POLR2AP24928 1970 aaKnown RBP22.32■■□□□ 1.16
CHRNA3-202ENST00000348639 TESPA1A2RU30 521 aaPredicted RBP22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 GTPBP10A4D1E9 387 aaKnown RBP22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 PPP1R12BO60237 982 aaPredicted RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms