RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 SUFUQ9UMX1 484 aa14.22□□□□□ -0.13
COL6A3-202ENST00000347401 IQCA1LA6NCM1 817 aa14.22□□□□□ -0.13
COL6A3-202ENST00000347401 HSPD1P10809 573 aaKnown RBP14.22□□□□□ -0.13
COL6A3-202ENST00000347401 PDIA3P30101 505 aaKnown RBP14.22□□□□□ -0.13
COL6A3-202ENST00000347401 POLGP54098 1239 aaPredicted RBP14.22□□□□□ -0.13
COL6A3-202ENST00000347401 GJC2Q5T442 439 aaPredicted RBP14.22□□□□□ -0.13
COL6A3-202ENST00000347401 SGSM3Q96HU1 749 aa14.22□□□□□ -0.13
COL6A3-202ENST00000347401 CNBD2Q96M20 576 aa14.22□□□□□ -0.13
COL6A3-202ENST00000347401 MTA3Q9BTC8 594 aa14.22□□□□□ -0.13
COL6A3-202ENST00000347401 CAMSAP1Q5T5Y3 1602 aa14.22□□□□□ -0.13
COL6A3-202ENST00000347401 ZNF839A8K0R7 811 aa14.22□□□□□ -0.13
COL6A3-202ENST00000347401 CCNE1P24864 410 aa14.22□□□□□ -0.13
COL6A3-202ENST00000347401 CYTH1Q15438 398 aa14.22□□□□□ -0.13
COL6A3-202ENST00000347401 ODR4Q5SWX8 454 aa14.22□□□□□ -0.13
COL6A3-202ENST00000347401 TRIM67Q6ZTA4 783 aa14.22□□□□□ -0.13
COL6A3-202ENST00000347401 ATG3Q9NT62 314 aa14.22□□□□□ -0.13
COL6A3-202ENST00000347401 ZHX2Q9Y6X8 837 aa14.22□□□□□ -0.13
COL6A3-202ENST00000347401 HNRNPDLO14979 420 aaKnown RBP14.21□□□□□ -0.13
COL6A3-202ENST00000347401 PDE6AP16499 860 aa14.21□□□□□ -0.13
COL6A3-202ENST00000347401 KIF19Q2TAC6 998 aa14.21□□□□□ -0.13
COL6A3-202ENST00000347401 PNMA1Q8ND90 353 aa14.21□□□□□ -0.13
COL6A3-202ENST00000347401 NSFL1CQ9UNZ2 370 aaKnown RBP14.21□□□□□ -0.13
COL6A3-202ENST00000347401 ZBBXA8MT70 800 aa14.21□□□□□ -0.13
COL6A3-202ENST00000347401 RASSF9O75901 435 aa14.21□□□□□ -0.13
COL6A3-202ENST00000347401 PSMA4P25789 261 aaKnown RBP14.21□□□□□ -0.13
COL6A3-202ENST00000347401 SYCP2LQ5T4T6 812 aa14.21□□□□□ -0.13
COL6A3-202ENST00000347401 TRIM69Q86WT6 500 aa14.21□□□□□ -0.13
COL6A3-202ENST00000347401 CPSF3Q9UKF6 684 aaKnown RBP14.21□□□□□ -0.13
COL6A3-202ENST00000347401 STAT4Q14765 748 aa14.21□□□□□ -0.13
COL6A3-202ENST00000347401 SLC44A4Q53GD3 710 aa14.21□□□□□ -0.13
COL6A3-202ENST00000347401 TUBGCP3Q96CW5 907 aa14.21□□□□□ -0.13
COL6A3-202ENST00000347401 ETNK1Q9HBU6 452 aa14.21□□□□□ -0.13
COL6A3-202ENST00000347401 SPAG6O75602 509 aa14.21□□□□□ -0.13
COL6A3-202ENST00000347401 ZBED1O96006 694 aa14.21□□□□□ -0.13
COL6A3-202ENST00000347401 PDHA1P08559 390 aa14.21□□□□□ -0.13
COL6A3-202ENST00000347401 ELF1P32519 619 aa14.21□□□□□ -0.13
COL6A3-202ENST00000347401 MRPS26Q9BYN8 205 aaKnown RBP14.21□□□□□ -0.13
COL6A3-202ENST00000347401 MMP1P03956 469 aa14.21□□□□□ -0.14
COL6A3-202ENST00000347401 PABPC4Q13310 644 aaKnown RBP eCLIP14.21□□□□□ -0.14
COL6A3-202ENST00000347401 SCYL2Q6P3W7 929 aa14.21□□□□□ -0.14
COL6A3-202ENST00000347401 C16orf89Q6UX73 402 aa14.21□□□□□ -0.14
COL6A3-202ENST00000347401 SKA2Q8WVK7 121 aaPredicted RBP14.21□□□□□ -0.14
COL6A3-202ENST00000347401 KCNJ14Q9UNX9 436 aa14.21□□□□□ -0.14
COL6A3-202ENST00000347401 MYO9BQ13459 2157 aa14.21□□□□□ -0.14
COL6A3-202ENST00000347401 PER1O15534 1290 aaPredicted RBP14.21□□□□□ -0.14
COL6A3-202ENST00000347401 AGTP01019 485 aa14.21□□□□□ -0.14
COL6A3-202ENST00000347401 LIFRP42702 1097 aa14.21□□□□□ -0.14
COL6A3-202ENST00000347401 SCRN1Q12765 414 aa14.21□□□□□ -0.14
COL6A3-202ENST00000347401 FAM102BQ5T8I3 360 aa14.21□□□□□ -0.14
COL6A3-202ENST00000347401 RASSF3Q86WH2 238 aa14.21□□□□□ -0.14
COL6A3-202ENST00000347401 RMDN1Q96DB5 314 aa14.21□□□□□ -0.14
COL6A3-202ENST00000347401 ELAC2Q9BQ52 826 aaKnown RBP14.21□□□□□ -0.14
COL6A3-202ENST00000347401 MED10Q9BTT4 135 aa14.21□□□□□ -0.14
COL6A3-202ENST00000347401 DISC1Q9NRI5 854 aa14.21□□□□□ -0.14
COL6A3-202ENST00000347401 ARHGEF16Q5VV41 709 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 LINC00301Q8NCQ3 95 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 SNF8Q96H20 258 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 KCNK16Q96T55 309 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 DDX56Q9NY93 547 aaKnown RBP14.2□□□□□ -0.14
COL6A3-202ENST00000347401 TSC22D4Q9Y3Q8 395 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 A0A1W2PQC6 194 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 LRRIQ3A6PVS8 624 aaPredicted RBP14.2□□□□□ -0.14
COL6A3-202ENST00000347401 PSMA3P25788 255 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 RANBP1P43487 201 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 CARSP49589 748 aaKnown RBP14.2□□□□□ -0.14
COL6A3-202ENST00000347401 RESP18Q5W5W9 173 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 ARMCX2Q7L311 632 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 TRIM63Q969Q1 353 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 NDST4Q9H3R1 872 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 STMN3Q9NZ72 180 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 HACD3Q9P035 362 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 TTC8Q8TAM2 541 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 ECT2Q9H8V3 914 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 KRT1P04264 644 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 RAD23BP54727 409 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 IL1RL1Q01638 556 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 RSPH1Q8WYR4 309 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 COG4Q9H9E3 785 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 LPXNO60711 386 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 CPA1P15085 419 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 BASP1P80723 227 aaKnown RBP14.2□□□□□ -0.14
COL6A3-202ENST00000347401 EIF3HO15372 352 aaKnown RBP eCLIP14.2□□□□□ -0.14
COL6A3-202ENST00000347401 SEC31AO94979 1220 aaKnown RBP14.2□□□□□ -0.14
COL6A3-202ENST00000347401 FGGP02679 453 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 LAMC2Q13753 1193 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 AGBL2Q5U5Z8 902 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 GDAP1Q8TB36 358 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 MAN1B1Q9UKM7 699 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 LGALS16A8MUM7 142 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 MAP3K13O43283 966 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 TBC1D4O60343 1298 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 TBXAS1P24557 533 aaPredicted RBP14.2□□□□□ -0.14
COL6A3-202ENST00000347401 MAGOHP61326 146 aaKnown RBP14.2□□□□□ -0.14
COL6A3-202ENST00000347401 CDR2LQ86X02 465 aaPredicted RBP14.2□□□□□ -0.14
COL6A3-202ENST00000347401 CEP95Q96GE4 821 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 YIPF3Q9GZM5 350 aa14.2□□□□□ -0.14
COL6A3-202ENST00000347401 A0A0G2JND7 137 aa14.19□□□□□ -0.14
COL6A3-202ENST00000347401 KRT87PA6NCN2 255 aa14.19□□□□□ -0.14
COL6A3-202ENST00000347401 KLRF2D3W0D1 207 aa14.19□□□□□ -0.14
COL6A3-202ENST00000347401 ENC1O14682 589 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms