RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 CD2APQ9Y5K6 639 aa23.29■■□□□ 1.32
TRIM3-201ENST00000345851 CCDC88AQ3V6T2 1871 aa23.28■■□□□ 1.32
TRIM3-201ENST00000345851 EIF4E1BA6NMX2 242 aaKnown RBP23.28■■□□□ 1.32
TRIM3-201ENST00000345851 LRRC63Q05C16 580 aa23.28■■□□□ 1.32
TRIM3-201ENST00000345851 GRIK3Q13003 919 aa23.28■■□□□ 1.32
TRIM3-201ENST00000345851 ASIC2Q16515 512 aa23.28■■□□□ 1.32
TRIM3-201ENST00000345851 SLC35G1Q2M3R5 365 aa23.28■■□□□ 1.32
TRIM3-201ENST00000345851 ACTRT1Q8TDG2 376 aa23.28■■□□□ 1.32
TRIM3-201ENST00000345851 PBKQ96KB5 322 aa23.28■■□□□ 1.32
TRIM3-201ENST00000345851 TBC1D7Q9P0N9 293 aa23.28■■□□□ 1.32
TRIM3-201ENST00000345851 SRCAPQ6ZRS2 3230 aa23.28■■□□□ 1.32
TRIM3-201ENST00000345851 SARNPP82979 210 aaKnown RBP23.28■■□□□ 1.32
TRIM3-201ENST00000345851 ADAT2Q7Z6V5 191 aaKnown RBP23.28■■□□□ 1.32
TRIM3-201ENST00000345851 PNMA1Q8ND90 353 aa23.28■■□□□ 1.32
TRIM3-201ENST00000345851 ARMC2Q8NEN0 867 aa23.28■■□□□ 1.32
TRIM3-201ENST00000345851 ZNF483Q8TF39 744 aaPredicted RBP23.28■■□□□ 1.32
TRIM3-201ENST00000345851 TLCD1Q96CP7 247 aa23.28■■□□□ 1.32
TRIM3-201ENST00000345851 SH3GLB2Q9NR46 395 aa23.28■■□□□ 1.32
TRIM3-201ENST00000345851 ATP8A2Q9NTI2 1148 aa23.28■■□□□ 1.32
TRIM3-201ENST00000345851 SAMD15Q9P1V8 674 aa23.28■■□□□ 1.32
TRIM3-201ENST00000345851 COL4A3BPQ9Y5P4 624 aa23.28■■□□□ 1.32
TRIM3-201ENST00000345851 FGRP09769 529 aa23.27■■□□□ 1.32
TRIM3-201ENST00000345851 CALRP27797 417 aaKnown RBP23.27■■□□□ 1.32
TRIM3-201ENST00000345851 BTDP43251 543 aa23.27■■□□□ 1.32
TRIM3-201ENST00000345851 UHMK1Q8TAS1 419 aaKnown RBP23.27■■□□□ 1.32
TRIM3-201ENST00000345851 CDK5RAP3Q96JB5 506 aa23.27■■□□□ 1.32
TRIM3-201ENST00000345851 ZNF570Q96NI8 536 aa23.27■■□□□ 1.32
TRIM3-201ENST00000345851 NUCKS1Q9H1E3 243 aaKnown RBP23.27■■□□□ 1.32
TRIM3-201ENST00000345851 ENO4A6NNW6 628 aa23.27■■□□□ 1.32
TRIM3-201ENST00000345851 PLSCR1O15162 318 aa23.27■■□□□ 1.32
TRIM3-201ENST00000345851 HOXA10P31260 410 aaPredicted RBP23.27■■□□□ 1.32
TRIM3-201ENST00000345851 GRB10Q13322 594 aa23.27■■□□□ 1.32
TRIM3-201ENST00000345851 TRPM8Q7Z2W7 1104 aa23.27■■□□□ 1.32
TRIM3-201ENST00000345851 NLGN1Q8N2Q7 840 aa23.27■■□□□ 1.32
TRIM3-201ENST00000345851 ABCB11O95342 1321 aa23.27■■□□□ 1.32
TRIM3-201ENST00000345851 CYTH3O43739 400 aa23.26■■□□□ 1.31
TRIM3-201ENST00000345851 GOLGA8HP0CJ92 632 aa23.26■■□□□ 1.31
TRIM3-201ENST00000345851 PTK2Q05397 1052 aa23.26■■□□□ 1.31
TRIM3-201ENST00000345851 COBLL1Q53SF7 1204 aa23.26■■□□□ 1.31
TRIM3-201ENST00000345851 LARP4BQ92615 738 aaKnown RBP23.26■■□□□ 1.31
TRIM3-201ENST00000345851 PRMT1Q99873 361 aaKnown RBP23.26■■□□□ 1.31
TRIM3-201ENST00000345851 COPB2P35606 906 aa23.26■■□□□ 1.31
TRIM3-201ENST00000345851 CRELD2Q6UXH1 353 aaPredicted RBP23.26■■□□□ 1.31
TRIM3-201ENST00000345851 PEX26Q7Z412 305 aa23.26■■□□□ 1.31
TRIM3-201ENST00000345851 SYN2Q92777 582 aaPredicted RBP23.26■■□□□ 1.31
TRIM3-201ENST00000345851 FMO2Q99518 471 aa23.26■■□□□ 1.31
TRIM3-201ENST00000345851 UTP11Q9Y3A2 253 aaKnown RBP23.26■■□□□ 1.31
TRIM3-201ENST00000345851 USP17L3A6NCW0 530 aa23.26■■□□□ 1.31
TRIM3-201ENST00000345851 USP17L4A6NCW7 530 aa23.26■■□□□ 1.31
TRIM3-201ENST00000345851 STXBP3O00186 592 aa23.26■■□□□ 1.31
TRIM3-201ENST00000345851 USP17L1Q7RTZ2 530 aa23.26■■□□□ 1.31
TRIM3-201ENST00000345851 DAAM2Q86T65 1068 aa23.26■■□□□ 1.31
TRIM3-201ENST00000345851 NELFCDQ8IXH7 590 aa23.26■■□□□ 1.31
TRIM3-201ENST00000345851 KCNQ5Q9NR82 932 aa23.26■■□□□ 1.31
TRIM3-201ENST00000345851 NOP53Q9NZM5 478 aaKnown RBP23.26■■□□□ 1.31
TRIM3-201ENST00000345851 A8MUI8 341 aa23.25■■□□□ 1.31
TRIM3-201ENST00000345851 KIF3CO14782 793 aa23.25■■□□□ 1.31
TRIM3-201ENST00000345851 UBOX5O94941 541 aa23.25■■□□□ 1.31
TRIM3-201ENST00000345851 ACTN1P12814 892 aa23.25■■□□□ 1.31
TRIM3-201ENST00000345851 TFAP4Q01664 338 aa23.25■■□□□ 1.31
TRIM3-201ENST00000345851 EN1Q05925 392 aaPredicted RBP23.25■■□□□ 1.31
TRIM3-201ENST00000345851 SPICE1Q8N0Z3 855 aa23.25■■□□□ 1.31
TRIM3-201ENST00000345851 KIF2BQ8N4N8 673 aa23.25■■□□□ 1.31
TRIM3-201ENST00000345851 CCDC26Q8TAB7 109 aa23.25■■□□□ 1.31
TRIM3-201ENST00000345851 ATXN2LQ8WWM7 1075 aaKnown RBP23.25■■□□□ 1.31
TRIM3-201ENST00000345851 CALR3Q96L12 384 aaKnown RBP23.25■■□□□ 1.31
TRIM3-201ENST00000345851 CRAMP1Q96RY5 1269 aa23.25■■□□□ 1.31
TRIM3-201ENST00000345851 RTFDC1Q9BY42 306 aaPredicted RBP23.25■■□□□ 1.31
TRIM3-201ENST00000345851 PDGFDQ9GZP0 370 aaPredicted RBP23.25■■□□□ 1.31
TRIM3-201ENST00000345851 CCDC113Q9H0I3 377 aa23.25■■□□□ 1.31
TRIM3-201ENST00000345851 NR2E1Q9Y466 385 aa23.25■■□□□ 1.31
TRIM3-201ENST00000345851 IFI35P80217 286 aaPredicted RBP23.25■■□□□ 1.31
TRIM3-201ENST00000345851 EGFL6Q8IUX8 553 aa23.25■■□□□ 1.31
TRIM3-201ENST00000345851 DDX12PQ92771 950 aa23.25■■□□□ 1.31
TRIM3-201ENST00000345851 BATF3Q9NR55 127 aa23.25■■□□□ 1.31
TRIM3-201ENST00000345851 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.25■■□□□ 1.31
TRIM3-201ENST00000345851 GSTA1P08263 222 aa23.24■■□□□ 1.31
TRIM3-201ENST00000345851 ALDH5A1P51649 535 aaPredicted RBP23.24■■□□□ 1.31
TRIM3-201ENST00000345851 CAPRIN2Q6IMN6 1127 aaKnown RBP23.24■■□□□ 1.31
TRIM3-201ENST00000345851 ZNF571Q7Z3V5 609 aaPredicted RBP23.24■■□□□ 1.31
TRIM3-201ENST00000345851 LRRC57Q8N9N7 239 aa23.24■■□□□ 1.31
TRIM3-201ENST00000345851 L3MBTL3Q96JM7 780 aaPredicted RBP23.24■■□□□ 1.31
TRIM3-201ENST00000345851 AZI2Q9H6S1 392 aa23.24■■□□□ 1.31
TRIM3-201ENST00000345851 INTS9Q9NV88 658 aaKnown RBP23.24■■□□□ 1.31
TRIM3-201ENST00000345851 ARPP21Q9UBL0 812 aaPredicted RBP23.24■■□□□ 1.31
TRIM3-201ENST00000345851 STK38LQ9Y2H1 464 aa23.24■■□□□ 1.31
TRIM3-201ENST00000345851 EPS15P42566 896 aa23.24■■□□□ 1.31
TRIM3-201ENST00000345851 NAPAP54920 295 aa23.24■■□□□ 1.31
TRIM3-201ENST00000345851 FKBP3Q00688 224 aaKnown RBP23.24■■□□□ 1.31
TRIM3-201ENST00000345851 PIGWQ7Z7B1 504 aa23.24■■□□□ 1.31
TRIM3-201ENST00000345851 PNMA5Q96PV4 448 aa23.24■■□□□ 1.31
TRIM3-201ENST00000345851 BARHL2Q9NY43 387 aa23.24■■□□□ 1.31
TRIM3-201ENST00000345851 POTEMA6NI47 508 aa23.23■■□□□ 1.31
TRIM3-201ENST00000345851 BHMG1C9JSJ3 638 aaPredicted RBP23.23■■□□□ 1.31
TRIM3-201ENST00000345851 CCDC188H7C350 402 aa23.23■■□□□ 1.31
TRIM3-201ENST00000345851 CES2O00748 559 aa23.23■■□□□ 1.31
TRIM3-201ENST00000345851 HGSO14964 777 aaPredicted RBP23.23■■□□□ 1.31
TRIM3-201ENST00000345851 PCP11498 1178 aaKnown RBP23.23■■□□□ 1.31
TRIM3-201ENST00000345851 IL1R1P14778 569 aa23.23■■□□□ 1.31
TRIM3-201ENST00000345851 PRPF4BQ13523 1007 aaKnown RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms