RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 ZNF211Q13398 564 aaPredicted RBP18.73■□□□□ 0.59
SPAST-202ENST00000345662 RIOK1Q9BRS2 568 aaKnown RBP18.73■□□□□ 0.59
SPAST-202ENST00000345662 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.73■□□□□ 0.59
SPAST-202ENST00000345662 GINS2Q9Y248 185 aa18.73■□□□□ 0.59
SPAST-202ENST00000345662 TCP11X1B4DZS4 312 aa18.73■□□□□ 0.59
SPAST-202ENST00000345662 TLK1Q9UKI8 766 aa18.73■□□□□ 0.59
SPAST-202ENST00000345662 HNRNPCL1O60812 293 aaKnown RBP18.73■□□□□ 0.59
SPAST-202ENST00000345662 KRT14P02533 472 aa18.73■□□□□ 0.59
SPAST-202ENST00000345662 HNRNPCP07910 306 aaKnown RBP eCLIP18.73■□□□□ 0.59
SPAST-202ENST00000345662 CHN1P15882 459 aa18.73■□□□□ 0.59
SPAST-202ENST00000345662 CUL3Q13618 768 aa18.73■□□□□ 0.59
SPAST-202ENST00000345662 AGBL2Q5U5Z8 902 aa18.73■□□□□ 0.59
SPAST-202ENST00000345662 C16orf87Q6PH81 154 aa18.73■□□□□ 0.59
SPAST-202ENST00000345662 XPO6Q96QU8 1125 aaKnown RBP18.73■□□□□ 0.59
SPAST-202ENST00000345662 USP15Q9Y4E8 981 aaPredicted RBP18.73■□□□□ 0.59
SPAST-202ENST00000345662 ORC6Q9Y5N6 252 aa18.73■□□□□ 0.59
SPAST-202ENST00000345662 CFAP74Q9C0B2 1584 aa18.73■□□□□ 0.59
SPAST-202ENST00000345662 GNGT2O14610 69 aa18.73■□□□□ 0.59
SPAST-202ENST00000345662 PDXDC1Q6P996 788 aa18.73■□□□□ 0.59
SPAST-202ENST00000345662 COA7Q96BR5 231 aa18.73■□□□□ 0.59
SPAST-202ENST00000345662 CALN1Q9BXU9 219 aa18.73■□□□□ 0.59
SPAST-202ENST00000345662 GOLGA8SH3BPF8 625 aa18.72■□□□□ 0.59
SPAST-202ENST00000345662 TJP3O95049 919 aa18.72■□□□□ 0.59
SPAST-202ENST00000345662 KLHL38Q2WGJ6 581 aa18.72■□□□□ 0.59
SPAST-202ENST00000345662 CCDC117Q8IWD4 279 aaPredicted RBP18.72■□□□□ 0.59
SPAST-202ENST00000345662 REXO1L1PQ8IX06 675 aa18.72■□□□□ 0.59
SPAST-202ENST00000345662 ZIM3Q96PE6 472 aa18.72■□□□□ 0.59
SPAST-202ENST00000345662 NEDD4P46934 1319 aa18.72■□□□□ 0.59
SPAST-202ENST00000345662 CFAP69A5D8W1 941 aa18.72■□□□□ 0.59
SPAST-202ENST00000345662 MCF2P10911 925 aa18.72■□□□□ 0.59
SPAST-202ENST00000345662 BRDTQ58F21 947 aaPredicted RBP18.72■□□□□ 0.59
SPAST-202ENST00000345662 EIF2AQ9BY44 585 aaKnown RBP18.72■□□□□ 0.59
SPAST-202ENST00000345662 WDR11Q9BZH6 1224 aa18.72■□□□□ 0.59
SPAST-202ENST00000345662 LY9Q9HBG7 655 aa18.72■□□□□ 0.59
SPAST-202ENST00000345662 BTG4Q9NY30 223 aa18.72■□□□□ 0.59
SPAST-202ENST00000345662 WDR46O15213 610 aaKnown RBP18.72■□□□□ 0.59
SPAST-202ENST00000345662 ICA1Q05084 483 aa18.72■□□□□ 0.59
SPAST-202ENST00000345662 PTGISQ16647 500 aa18.72■□□□□ 0.59
SPAST-202ENST00000345662 FSCBQ5H9T9 825 aa18.72■□□□□ 0.59
SPAST-202ENST00000345662 AGGF1Q8N302 714 aaeCLIP18.72■□□□□ 0.59
SPAST-202ENST00000345662 DACT3Q96B18 629 aaPredicted RBP18.72■□□□□ 0.59
SPAST-202ENST00000345662 SGSM3Q96HU1 749 aa18.72■□□□□ 0.59
SPAST-202ENST00000345662 ZNF277Q9NRM2 450 aaPredicted RBP18.72■□□□□ 0.59
SPAST-202ENST00000345662 KRT10P13645 584 aa18.72■□□□□ 0.59
SPAST-202ENST00000345662 SEC24CP53992 1094 aa18.72■□□□□ 0.59
SPAST-202ENST00000345662 TRPM8Q7Z2W7 1104 aa18.72■□□□□ 0.59
SPAST-202ENST00000345662 GGT7Q9UJ14 662 aa18.72■□□□□ 0.59
SPAST-202ENST00000345662 FBXO2Q9UK22 296 aaPredicted RBP18.72■□□□□ 0.59
SPAST-202ENST00000345662 TOM1O60784 492 aa18.71■□□□□ 0.59
SPAST-202ENST00000345662 ZRANB2O95218 330 aaKnown RBP eCLIP18.71■□□□□ 0.59
SPAST-202ENST00000345662 IL1RL1Q01638 556 aa18.71■□□□□ 0.59
SPAST-202ENST00000345662 CCDC137Q6PK04 289 aaKnown RBP18.71■□□□□ 0.59
SPAST-202ENST00000345662 CCDC24Q8N4L8 307 aa18.71■□□□□ 0.59
SPAST-202ENST00000345662 ICA1LQ8NDH6 482 aa18.71■□□□□ 0.59
SPAST-202ENST00000345662 DEPDC1BQ8WUY9 529 aa18.71■□□□□ 0.59
SPAST-202ENST00000345662 MTA3Q9BTC8 594 aa18.71■□□□□ 0.59
SPAST-202ENST00000345662 ANKFY1Q9P2R3 1169 aa18.71■□□□□ 0.59
SPAST-202ENST00000345662 hCG_2014768A0A024R1R8 64 aa18.71■□□□□ 0.59
SPAST-202ENST00000345662 CAPN9O14815 690 aa18.71■□□□□ 0.59
SPAST-202ENST00000345662 GTF2IP78347 998 aa18.71■□□□□ 0.59
SPAST-202ENST00000345662 PFKFB3Q16875 520 aaPredicted RBP18.71■□□□□ 0.59
SPAST-202ENST00000345662 CERKLQ49MI3 558 aaPredicted RBP18.71■□□□□ 0.59
SPAST-202ENST00000345662 KCTD6Q8NC69 237 aa18.71■□□□□ 0.59
SPAST-202ENST00000345662 ANAPC7Q9UJX3 599 aa18.71■□□□□ 0.59
SPAST-202ENST00000345662 INPP1P49441 399 aa18.71■□□□□ 0.59
SPAST-202ENST00000345662 CDCA7Q9BWT1 371 aaPredicted RBP18.71■□□□□ 0.59
SPAST-202ENST00000345662 CD248Q9HCU0 757 aa18.71■□□□□ 0.59
SPAST-202ENST00000345662 KPNA2P52292 529 aaKnown RBP18.71■□□□□ 0.59
SPAST-202ENST00000345662 EPHB1P54762 984 aa18.71■□□□□ 0.59
SPAST-202ENST00000345662 CRYMQ14894 314 aa18.71■□□□□ 0.59
SPAST-202ENST00000345662 GUF1Q8N442 669 aaKnown RBP18.71■□□□□ 0.59
SPAST-202ENST00000345662 MCUQ8NE86 351 aa18.71■□□□□ 0.59
SPAST-202ENST00000345662 POLD4Q9HCU8 107 aa18.71■□□□□ 0.59
SPAST-202ENST00000345662 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.71■□□□□ 0.599e-7■■□□□ 11.8
SPAST-202ENST00000345662 LRRIQ4A6NIV6 560 aa18.7■□□□□ 0.58
SPAST-202ENST00000345662 PDE6BP35913 854 aa18.7■□□□□ 0.58
SPAST-202ENST00000345662 OCA2Q04671 838 aa18.7■□□□□ 0.58
SPAST-202ENST00000345662 DCLK2Q8N568 766 aa18.7■□□□□ 0.58
SPAST-202ENST00000345662 NUB1Q9Y5A7 615 aa18.7■□□□□ 0.58
SPAST-202ENST00000345662 CYP2D7A0A087X1C5 515 aa18.7■□□□□ 0.58
SPAST-202ENST00000345662 CCT8L1PA6NM43 557 aa18.7■□□□□ 0.58
SPAST-202ENST00000345662 KRT38O76015 456 aa18.7■□□□□ 0.58
SPAST-202ENST00000345662 HSPA8P11142 646 aaKnown RBP18.7■□□□□ 0.58
SPAST-202ENST00000345662 KCNB1Q14721 858 aa18.7■□□□□ 0.58
SPAST-202ENST00000345662 PNKPQ96T60 521 aa18.7■□□□□ 0.58
SPAST-202ENST00000345662 ZNF577Q9BSK1 485 aa18.7■□□□□ 0.58
SPAST-202ENST00000345662 TRIM10Q9UDY6 481 aa18.7■□□□□ 0.58
SPAST-202ENST00000345662 CNOT8Q9UFF9 292 aaKnown RBP18.7■□□□□ 0.58
SPAST-202ENST00000345662 MRPS35P82673 323 aaKnown RBP18.7■□□□□ 0.58
SPAST-202ENST00000345662 EXOSC10Q01780 885 aaKnown RBP18.7■□□□□ 0.58
SPAST-202ENST00000345662 MMGT1Q8N4V1 131 aa18.7■□□□□ 0.58
SPAST-202ENST00000345662 GFM2Q969S9 779 aaKnown RBP18.7■□□□□ 0.58
SPAST-202ENST00000345662 MS4A14Q96JA4 679 aa18.7■□□□□ 0.58
SPAST-202ENST00000345662 PICK1Q9NRD5 415 aa18.7■□□□□ 0.58
SPAST-202ENST00000345662 GGPS1O95749 300 aa18.7■□□□□ 0.58
SPAST-202ENST00000345662 TTLL1O95922 423 aa18.7■□□□□ 0.58
SPAST-202ENST00000345662 MCAMP43121 646 aa18.7■□□□□ 0.58
SPAST-202ENST00000345662 NT5C2P49902 561 aa18.7■□□□□ 0.58
SPAST-202ENST00000345662 TAF12Q16514 161 aa18.7■□□□□ 0.58
SPAST-202ENST00000345662 ARHGEF16Q5VV41 709 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms