RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 MARCKSP29966 332 aaPredicted RBP23.28■■□□□ 1.32
SMARCB1-202ENST00000344921 TBC1D8BQ0IIM8 1120 aa23.28■■□□□ 1.32
SMARCB1-202ENST00000344921 ZNF618Q5T7W0 954 aa23.28■■□□□ 1.32
SMARCB1-202ENST00000344921 SNX29Q8TEQ0 813 aa23.28■■□□□ 1.32
SMARCB1-202ENST00000344921 CEP170P1Q96L14 293 aa23.28■■□□□ 1.32
SMARCB1-202ENST00000344921 POLR3CQ9BUI4 534 aaPredicted RBP23.28■■□□□ 1.32
SMARCB1-202ENST00000344921 MYH15Q9Y2K3 1946 aa23.28■■□□□ 1.32
SMARCB1-202ENST00000344921 PP2D1A8MPX8 630 aa23.28■■□□□ 1.32
SMARCB1-202ENST00000344921 CTSHP09668 335 aa23.28■■□□□ 1.32
SMARCB1-202ENST00000344921 SPATA31C1P0DKV0 1188 aa23.28■■□□□ 1.32
SMARCB1-202ENST00000344921 CSF2RAP15509 400 aa23.28■■□□□ 1.32
SMARCB1-202ENST00000344921 SELPP16109 830 aa23.28■■□□□ 1.32
SMARCB1-202ENST00000344921 RPA1P27694 616 aa23.28■■□□□ 1.32
SMARCB1-202ENST00000344921 CDC25AP30304 524 aa23.28■■□□□ 1.32
SMARCB1-202ENST00000344921 STK38Q15208 465 aa23.28■■□□□ 1.32
SMARCB1-202ENST00000344921 LRRC8DQ7L1W4 858 aa23.28■■□□□ 1.32
SMARCB1-202ENST00000344921 ZBTB39O15060 712 aa23.27■■□□□ 1.32
SMARCB1-202ENST00000344921 MAGEB2O15479 319 aa23.27■■□□□ 1.32
SMARCB1-202ENST00000344921 C22orf31O95567 290 aa23.27■■□□□ 1.32
SMARCB1-202ENST00000344921 IQCF3P0C7M6 154 aa23.27■■□□□ 1.32
SMARCB1-202ENST00000344921 NPEPPSP55786 919 aa23.27■■□□□ 1.32
SMARCB1-202ENST00000344921 PTPAQ15257 358 aa23.27■■□□□ 1.32
SMARCB1-202ENST00000344921 ZRSR1Q15695 479 aaKnown RBP23.27■■□□□ 1.32
SMARCB1-202ENST00000344921 TRIM71Q2Q1W2 868 aaKnown RBP23.27■■□□□ 1.32
SMARCB1-202ENST00000344921 XKR9Q5GH70 373 aa23.27■■□□□ 1.32
SMARCB1-202ENST00000344921 CHRDL2Q6WN34 429 aa23.27■■□□□ 1.32
SMARCB1-202ENST00000344921 PIGOQ8TEQ8 1089 aa23.27■■□□□ 1.32
SMARCB1-202ENST00000344921 UBE2OQ9C0C9 1292 aaKnown RBP23.27■■□□□ 1.32
SMARCB1-202ENST00000344921 SUGCTQ9HAC7 445 aa23.27■■□□□ 1.32
SMARCB1-202ENST00000344921 CYP26B1Q9NR63 512 aa23.27■■□□□ 1.32
SMARCB1-202ENST00000344921 SMIM35A0A1B0GVV1 85 aa23.26■■□□□ 1.31
SMARCB1-202ENST00000344921 PPIGQ13427 754 aaKnown RBP eCLIP23.26■■□□□ 1.312e-8■■□□□ 13.4
SMARCB1-202ENST00000344921 EFCAB12Q6NXP0 572 aa23.26■■□□□ 1.31
SMARCB1-202ENST00000344921 GDF15Q99988 308 aa23.26■■□□□ 1.31
SMARCB1-202ENST00000344921 ZDHHC9Q9Y397 364 aa23.26■■□□□ 1.31
SMARCB1-202ENST00000344921 A0A087WWV3 80 aa23.25■■□□□ 1.31
SMARCB1-202ENST00000344921 RSPH10B2B2RC85 870 aa23.25■■□□□ 1.31
SMARCB1-202ENST00000344921 LYPLA2O95372 231 aa23.25■■□□□ 1.31
SMARCB1-202ENST00000344921 RPLP2P05387 115 aaKnown RBP23.25■■□□□ 1.31
SMARCB1-202ENST00000344921 RSPH10BP0C881 870 aa23.25■■□□□ 1.31
SMARCB1-202ENST00000344921 TMOD1P28289 359 aa23.25■■□□□ 1.31
SMARCB1-202ENST00000344921 RBL2Q08999 1139 aa23.25■■□□□ 1.31
SMARCB1-202ENST00000344921 SLC39A14Q15043 492 aa23.25■■□□□ 1.31
SMARCB1-202ENST00000344921 TARBP2Q15633 366 aaKnown RBP23.25■■□□□ 1.31
SMARCB1-202ENST00000344921 POTEGQ6S5H5 508 aa23.25■■□□□ 1.31
SMARCB1-202ENST00000344921 DEFB128Q7Z7B8 93 aa23.25■■□□□ 1.31
SMARCB1-202ENST00000344921 NACC1Q96RE7 527 aa23.25■■□□□ 1.31
SMARCB1-202ENST00000344921 M0QZ92 97 aa23.25■■□□□ 1.31
SMARCB1-202ENST00000344921 CAND2O75155 1236 aa23.25■■□□□ 1.31
SMARCB1-202ENST00000344921 TMEM62Q0P6H9 643 aa23.25■■□□□ 1.31
SMARCB1-202ENST00000344921 LRRC71Q8N4P6 559 aa23.25■■□□□ 1.31
SMARCB1-202ENST00000344921 EVPLQ92817 2033 aa23.25■■□□□ 1.31
SMARCB1-202ENST00000344921 AK8Q96MA6 479 aa23.25■■□□□ 1.31
SMARCB1-202ENST00000344921 ATP6V1DQ9Y5K8 247 aa23.25■■□□□ 1.31
SMARCB1-202ENST00000344921 LONP1P36776 959 aaKnown RBP23.24■■□□□ 1.31
SMARCB1-202ENST00000344921 NASPP49321 788 aaPredicted RBP23.24■■□□□ 1.31
SMARCB1-202ENST00000344921 POLGP54098 1239 aaPredicted RBP23.24■■□□□ 1.31
SMARCB1-202ENST00000344921 NUCB2P80303 420 aa23.24■■□□□ 1.31
SMARCB1-202ENST00000344921 DNM1Q05193 864 aaKnown RBP23.24■■□□□ 1.31
SMARCB1-202ENST00000344921 IER5Q5VY09 327 aa23.24■■□□□ 1.31
SMARCB1-202ENST00000344921 RPUSD2Q8IZ73 545 aaKnown RBP23.24■■□□□ 1.31
SMARCB1-202ENST00000344921 SLC7A3Q8WY07 619 aa23.24■■□□□ 1.31
SMARCB1-202ENST00000344921 CDK5RAP3Q96JB5 506 aa23.24■■□□□ 1.31
SMARCB1-202ENST00000344921 ANKEF1Q9NU02 776 aa23.24■■□□□ 1.31
SMARCB1-202ENST00000344921 CFAP45Q9UL16 551 aa23.24■■□□□ 1.31
SMARCB1-202ENST00000344921 KIAA1024Q9UPX6 916 aa23.24■■□□□ 1.31
SMARCB1-202ENST00000344921 PARNO95453 639 aaKnown RBP23.23■■□□□ 1.31
SMARCB1-202ENST00000344921 ACRP10323 421 aa23.23■■□□□ 1.31
SMARCB1-202ENST00000344921 MUTP22033 750 aa23.23■■□□□ 1.31
SMARCB1-202ENST00000344921 UBA7P41226 1012 aa23.23■■□□□ 1.31
SMARCB1-202ENST00000344921 CLCN3P51790 818 aa23.23■■□□□ 1.31
SMARCB1-202ENST00000344921 GRIN1Q05586 938 aa23.23■■□□□ 1.31
SMARCB1-202ENST00000344921 ATL3Q6DD88 541 aa23.23■■□□□ 1.31
SMARCB1-202ENST00000344921 RPAINQ86UA6 219 aa23.23■■□□□ 1.31
SMARCB1-202ENST00000344921 NME8Q8N427 588 aa23.23■■□□□ 1.31
SMARCB1-202ENST00000344921 ZNF579Q8NAF0 562 aaKnown RBP23.23■■□□□ 1.31
SMARCB1-202ENST00000344921 LINC00301Q8NCQ3 95 aa23.23■■□□□ 1.31
SMARCB1-202ENST00000344921 MAP7D2Q96T17 732 aa23.23■■□□□ 1.31
SMARCB1-202ENST00000344921 JPH2Q9BR39 696 aaPredicted RBP23.23■■□□□ 1.31
SMARCB1-202ENST00000344921 BMP2KQ9NSY1 1161 aaPredicted RBP23.23■■□□□ 1.31
SMARCB1-202ENST00000344921 DDX19AQ9NUU7 478 aaKnown RBP23.23■■□□□ 1.31
SMARCB1-202ENST00000344921 AKT3Q9Y243 479 aa23.23■■□□□ 1.31
SMARCB1-202ENST00000344921 SRPRBQ9Y5M8 271 aaKnown RBP23.23■■□□□ 1.31
SMARCB1-202ENST00000344921 SPTLC2O15270 562 aa23.22■■□□□ 1.31
SMARCB1-202ENST00000344921 XRCC6P12956 609 aaKnown RBP eCLIP23.22■■□□□ 1.31
SMARCB1-202ENST00000344921 NCLP19338 710 aaKnown RBP23.22■■□□□ 1.31
SMARCB1-202ENST00000344921 RFC2P35250 354 aa23.22■■□□□ 1.31
SMARCB1-202ENST00000344921 DNM2P50570 870 aa23.22■■□□□ 1.31
SMARCB1-202ENST00000344921 EXOC8Q8IYI6 725 aa23.22■■□□□ 1.31
SMARCB1-202ENST00000344921 KIAA0319LQ8IZA0 1049 aa23.22■■□□□ 1.31
SMARCB1-202ENST00000344921 RASSF8Q8NHQ8 419 aa23.22■■□□□ 1.31
SMARCB1-202ENST00000344921 IL23AQ9NPF7 189 aa23.22■■□□□ 1.31
SMARCB1-202ENST00000344921 FBXO2Q9UK22 296 aaPredicted RBP23.22■■□□□ 1.31
SMARCB1-202ENST00000344921 GINS2Q9Y248 185 aa23.22■■□□□ 1.31
SMARCB1-202ENST00000344921 PPME1Q9Y570 386 aa23.22■■□□□ 1.31
SMARCB1-202ENST00000344921 TANC1Q9C0D5 1861 aa23.22■■□□□ 1.31
SMARCB1-202ENST00000344921 MAFO75444 373 aaPredicted RBP23.22■■□□□ 1.31
SMARCB1-202ENST00000344921 MRPS6P82932 125 aaKnown RBP23.22■■□□□ 1.31
SMARCB1-202ENST00000344921 ECM1Q16610 540 aa23.22■■□□□ 1.31
SMARCB1-202ENST00000344921 CABP7Q86V35 215 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms