RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 APBB2Q92870 758 aa20.33■□□□□ 0.85
USF2-202ENST00000343550 C17orf80Q9BSJ5 609 aa20.33■□□□□ 0.85
USF2-202ENST00000343550 IFIH1Q9BYX4 1025 aaKnown RBP20.33■□□□□ 0.85
USF2-202ENST00000343550 FOXP1Q9H334 677 aaPredicted RBP20.33■□□□□ 0.85
USF2-202ENST00000343550 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.33■□□□□ 0.85
USF2-202ENST00000343550 GAS7O60861 476 aa20.32■□□□□ 0.84
USF2-202ENST00000343550 UPP2O95045 317 aa20.32■□□□□ 0.84
USF2-202ENST00000343550 GJB2P29033 226 aa20.32■□□□□ 0.84
USF2-202ENST00000343550 PPFIA1Q13136 1202 aa20.32■□□□□ 0.84
USF2-202ENST00000343550 CUL4AQ13619 759 aa20.32■□□□□ 0.84
USF2-202ENST00000343550 SWSAP1Q6NVH7 229 aa20.32■□□□□ 0.84
USF2-202ENST00000343550 MIS18BP1Q6P0N0 1132 aa20.32■□□□□ 0.84
USF2-202ENST00000343550 RUFY4Q6ZNE9 571 aa20.32■□□□□ 0.84
USF2-202ENST00000343550 SMAP1Q8IYB5 467 aaPredicted RBP20.32■□□□□ 0.84
USF2-202ENST00000343550 YME1L1Q96TA2 773 aa20.32■□□□□ 0.84
USF2-202ENST00000343550 KCNMB3Q9NPA1 279 aa20.32■□□□□ 0.84
USF2-202ENST00000343550 KIF3AQ9Y496 699 aa20.32■□□□□ 0.84
USF2-202ENST00000343550 PCDHA10Q9Y5I2 948 aa20.32■□□□□ 0.84
USF2-202ENST00000343550 GRIK4Q16099 956 aa20.32■□□□□ 0.84
USF2-202ENST00000343550 CCDC60Q8IWA6 550 aaPredicted RBP20.32■□□□□ 0.84
USF2-202ENST00000343550 FBXO22Q8NEZ5 403 aa20.32■□□□□ 0.84
USF2-202ENST00000343550 FAM20AQ96MK3 541 aa20.32■□□□□ 0.84
USF2-202ENST00000343550 TEKT3Q9BXF9 490 aa20.32■□□□□ 0.84
USF2-202ENST00000343550 SMC3Q9UQE7 1217 aa20.32■□□□□ 0.84
USF2-202ENST00000343550 MICAL3Q7RTP6 2002 aa20.31■□□□□ 0.84
USF2-202ENST00000343550 BACH1O14867 736 aa20.31■□□□□ 0.84
USF2-202ENST00000343550 SLC26A2P50443 739 aa20.31■□□□□ 0.84
USF2-202ENST00000343550 PLCB4Q15147 1175 aa20.31■□□□□ 0.84
USF2-202ENST00000343550 MARCH8Q5T0T0 291 aa20.31■□□□□ 0.84
USF2-202ENST00000343550 B3GNT9Q6UX72 402 aa20.31■□□□□ 0.84
USF2-202ENST00000343550 RSPH3Q86UC2 560 aa20.31■□□□□ 0.84
USF2-202ENST00000343550 HAS1Q92839 578 aa20.31■□□□□ 0.84
USF2-202ENST00000343550 UNC45AQ9H3U1 944 aa20.31■□□□□ 0.84
USF2-202ENST00000343550 ZNF302Q9NR11 478 aa20.31■□□□□ 0.84
USF2-202ENST00000343550 DISC1Q9NRI5 854 aa20.31■□□□□ 0.84
USF2-202ENST00000343550 TCEAL9Q9UHQ7 104 aa20.31■□□□□ 0.84
USF2-202ENST00000343550 TUBE1Q9UJT0 475 aa20.31■□□□□ 0.84
USF2-202ENST00000343550 MAFBQ9Y5Q3 323 aaPredicted RBP20.31■□□□□ 0.84
USF2-202ENST00000343550 COL4A4P53420 1690 aaPredicted RBP20.31■□□□□ 0.84
USF2-202ENST00000343550 TCF20Q9UGU0 1960 aaKnown RBP20.31■□□□□ 0.84
USF2-202ENST00000343550 MBLAC1A4D2B0 266 aaPredicted RBP20.3■□□□□ 0.84
USF2-202ENST00000343550 WDR64B1ANS9 1081 aa20.3■□□□□ 0.84
USF2-202ENST00000343550 WNT7AO00755 349 aa20.3■□□□□ 0.84
USF2-202ENST00000343550 TBX3O15119 743 aa20.3■□□□□ 0.84
USF2-202ENST00000343550 PSAPP07602 524 aa20.3■□□□□ 0.84
USF2-202ENST00000343550 U2AF2P26368 475 aaKnown RBP eCLIP20.3■□□□□ 0.84
USF2-202ENST00000343550 EPC2Q52LR7 807 aa20.3■□□□□ 0.84
USF2-202ENST00000343550 FAM160B1Q5W0V3 765 aa20.3■□□□□ 0.84
USF2-202ENST00000343550 SAMD11Q96NU1 681 aa20.3■□□□□ 0.84
USF2-202ENST00000343550 SAMM50Q9Y512 469 aa20.3■□□□□ 0.84
USF2-202ENST00000343550 GHRP10912 638 aa20.29■□□□□ 0.84
USF2-202ENST00000343550 INSRRP14616 1297 aa20.29■□□□□ 0.84
USF2-202ENST00000343550 ATP4AP20648 1035 aa20.29■□□□□ 0.84
USF2-202ENST00000343550 MGAT3Q09327 533 aa20.29■□□□□ 0.84
USF2-202ENST00000343550 PDXDC2PQ6P474 469 aa20.29■□□□□ 0.84
USF2-202ENST00000343550 POTEDQ86YR6 584 aa20.29■□□□□ 0.84
USF2-202ENST00000343550 NOSTRINQ8IVI9 506 aa20.29■□□□□ 0.84
USF2-202ENST00000343550 DNAJB3Q8WWF6 145 aa20.29■□□□□ 0.84
USF2-202ENST00000343550 TNPO1Q92973 898 aaKnown RBP20.29■□□□□ 0.84
USF2-202ENST00000343550 POTEB3A0JP26 581 aa20.28■□□□□ 0.84
USF2-202ENST00000343550 RRN3P2A6NIE6 340 aa20.28■□□□□ 0.84
USF2-202ENST00000343550 CHMP2AO43633 222 aa20.28■□□□□ 0.84
USF2-202ENST00000343550 SFNP31947 248 aa20.28■□□□□ 0.84
USF2-202ENST00000343550 IGBP1P78318 339 aa20.28■□□□□ 0.84
USF2-202ENST00000343550 LPIN1Q14693 890 aa20.28■□□□□ 0.84
USF2-202ENST00000343550 POTEBQ6S5H4 581 aa20.28■□□□□ 0.84
USF2-202ENST00000343550 SNX21Q969T3 373 aa20.28■□□□□ 0.84
USF2-202ENST00000343550 GABBR1Q9UBS5 961 aa20.28■□□□□ 0.84
USF2-202ENST00000343550 NCOR1O75376 2440 aa20.28■□□□□ 0.84
USF2-202ENST00000343550 KAT6AQ92794 2004 aa20.28■□□□□ 0.84
USF2-202ENST00000343550 ATP2B1P20020 1258 aa20.27■□□□□ 0.84
USF2-202ENST00000343550 JAK3P52333 1124 aa20.27■□□□□ 0.84
USF2-202ENST00000343550 GNL2Q13823 731 aaKnown RBP20.27■□□□□ 0.84
USF2-202ENST00000343550 RDM1Q8NG50 284 aa20.27■□□□□ 0.84
USF2-202ENST00000343550 MRPL38Q96DV4 380 aaKnown RBP20.27■□□□□ 0.84
USF2-202ENST00000343550 TRPC6Q9Y210 931 aa20.27■□□□□ 0.84
USF2-202ENST00000343550 SIP14410 1827 aa20.27■□□□□ 0.84
USF2-202ENST00000343550 H3BNC9 293 aa20.27■□□□□ 0.83
USF2-202ENST00000343550 K7ELQ4 463 aaPredicted RBP20.27■□□□□ 0.83
USF2-202ENST00000343550 MARCH6O60337 910 aa20.27■□□□□ 0.83
USF2-202ENST00000343550 HBP1O60381 514 aa20.27■□□□□ 0.83
USF2-202ENST00000343550 BAG4O95429 457 aaKnown RBP20.27■□□□□ 0.83
USF2-202ENST00000343550 PPP2R5CQ13362 524 aa20.27■□□□□ 0.83
USF2-202ENST00000343550 PTPROQ16827 1216 aa20.27■□□□□ 0.83
USF2-202ENST00000343550 FBXO47Q5MNV8 452 aa20.27■□□□□ 0.83
USF2-202ENST00000343550 LARP1BQ659C4 914 aaKnown RBP20.27■□□□□ 0.83
USF2-202ENST00000343550 MIER3Q7Z3K6 550 aa20.27■□□□□ 0.83
USF2-202ENST00000343550 TMEM192Q8IY95 271 aa20.27■□□□□ 0.83
USF2-202ENST00000343550 SLFN12Q8IYM2 578 aa20.27■□□□□ 0.83
USF2-202ENST00000343550 ATP8B4Q8TF62 1192 aa20.27■□□□□ 0.83
USF2-202ENST00000343550 ZBTB10Q96DT7 871 aa20.27■□□□□ 0.83
USF2-202ENST00000343550 VAV3Q9UKW4 847 aa20.27■□□□□ 0.83
USF2-202ENST00000343550 CDY2AQ9Y6F7 541 aa20.27■□□□□ 0.83
USF2-202ENST00000343550 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.26■□□□□ 0.83
USF2-202ENST00000343550 ENPP3O14638 875 aa20.26■□□□□ 0.83
USF2-202ENST00000343550 RPLP2P05387 115 aaKnown RBP20.26■□□□□ 0.83
USF2-202ENST00000343550 MTMR9Q96QG7 549 aa20.26■□□□□ 0.83
USF2-202ENST00000343550 UBE2ZQ9H832 354 aaPredicted RBP20.26■□□□□ 0.83
USF2-202ENST00000343550 H3BQV1 296 aa20.25■□□□□ 0.83
USF2-202ENST00000343550 EML1O00423 815 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms