RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 SUGCTQ9HAC7 445 aa14.36□□□□□ -0.11
COL18A1-201ENST00000342220 TXNRD2Q9NNW7 524 aa14.36□□□□□ -0.11
COL18A1-201ENST00000342220 PXMP2Q9NR77 195 aa14.36□□□□□ -0.11
COL18A1-201ENST00000342220 ZNF214Q9UL59 606 aaPredicted RBP14.36□□□□□ -0.11
COL18A1-201ENST00000342220 SUFUQ9UMX1 484 aa14.36□□□□□ -0.11
COL18A1-201ENST00000342220 CCL15-CCL14A0A0B4J2E2 113 aa14.35□□□□□ -0.11
COL18A1-201ENST00000342220 SPATA31C1P0DKV0 1188 aa14.35□□□□□ -0.11
COL18A1-201ENST00000342220 APBA1Q02410 837 aa14.35□□□□□ -0.11
COL18A1-201ENST00000342220 KCTD2Q14681 263 aa14.35□□□□□ -0.11
COL18A1-201ENST00000342220 CCL15Q16663 113 aa14.35□□□□□ -0.11
COL18A1-201ENST00000342220 TMEM132AQ24JP5 1023 aa14.35□□□□□ -0.11
COL18A1-201ENST00000342220 UNC13DQ70J99 1090 aa14.35□□□□□ -0.11
COL18A1-201ENST00000342220 CCDC91Q7Z6B0 441 aa14.35□□□□□ -0.11
COL18A1-201ENST00000342220 GLG1Q92896 1179 aa14.35□□□□□ -0.11
COL18A1-201ENST00000342220 IGLV3-22A0A075B6J6 115 aa14.35□□□□□ -0.11
COL18A1-201ENST00000342220 TFRCP02786 760 aaKnown RBP14.35□□□□□ -0.11
COL18A1-201ENST00000342220 OAS2P29728 719 aaKnown RBP14.35□□□□□ -0.11
COL18A1-201ENST00000342220 FAM178BQ8IXR5 827 aa14.35□□□□□ -0.11
COL18A1-201ENST00000342220 SEMA6BQ9H3T3 888 aa14.35□□□□□ -0.11
COL18A1-201ENST00000342220 RWDD2AQ9UIY3 292 aa14.35□□□□□ -0.11
COL18A1-201ENST00000342220 ANKRD65E5RJM6 399 aa14.34□□□□□ -0.11
COL18A1-201ENST00000342220 RNF225M0QZC1 329 aaPredicted RBP14.34□□□□□ -0.11
COL18A1-201ENST00000342220 KIF5CO60282 957 aa14.34□□□□□ -0.11
COL18A1-201ENST00000342220 TCP11X2Q5H9J9 407 aa14.34□□□□□ -0.11
COL18A1-201ENST00000342220 CEP170P1Q96L14 293 aa14.34□□□□□ -0.11
COL18A1-201ENST00000342220 NAA15Q9BXJ9 866 aaKnown RBP14.34□□□□□ -0.11
COL18A1-201ENST00000342220 MLXIPQ9HAP2 919 aa14.34□□□□□ -0.11
COL18A1-201ENST00000342220 ARFGAP3Q9NP61 516 aa14.34□□□□□ -0.11
COL18A1-201ENST00000342220 RHOBTB3O94955 611 aa14.34□□□□□ -0.11
COL18A1-201ENST00000342220 RPA1P27694 616 aa14.34□□□□□ -0.11
COL18A1-201ENST00000342220 CCND2P30279 289 aa14.34□□□□□ -0.11
COL18A1-201ENST00000342220 KRT9P35527 623 aa14.34□□□□□ -0.11
COL18A1-201ENST00000342220 DNA2P51530 1060 aa14.34□□□□□ -0.11
COL18A1-201ENST00000342220 SATB1Q01826 763 aa14.34□□□□□ -0.11
COL18A1-201ENST00000342220 ADAM9Q13443 819 aa14.34□□□□□ -0.11
COL18A1-201ENST00000342220 UGCGQ16739 394 aa14.34□□□□□ -0.11
COL18A1-201ENST00000342220 TRIM50Q86XT4 487 aa14.34□□□□□ -0.11
COL18A1-201ENST00000342220 GIMAP8Q8ND71 665 aaPredicted RBP14.34□□□□□ -0.11
COL18A1-201ENST00000342220 RBM46Q8TBY0 533 aaKnown RBP14.34□□□□□ -0.11
COL18A1-201ENST00000342220 ELMO3Q96BJ8 720 aa14.34□□□□□ -0.11
COL18A1-201ENST00000342220 SPATC1LQ9H0A9 340 aa14.34□□□□□ -0.11
COL18A1-201ENST00000342220 DONSONQ9NYP3 566 aa14.34□□□□□ -0.11
COL18A1-201ENST00000342220 IVNS1ABPQ9Y6Y0 642 aa14.34□□□□□ -0.11
COL18A1-201ENST00000342220 GOLGA8IPA6NC78 632 aa14.33□□□□□ -0.11
COL18A1-201ENST00000342220 GOLGA8JA6NMD2 632 aa14.33□□□□□ -0.11
COL18A1-201ENST00000342220 TISP43B9A030 160 aa14.33□□□□□ -0.11
COL18A1-201ENST00000342220 K7ENM7 598 aa14.33□□□□□ -0.11
COL18A1-201ENST00000342220 NOP56O00567 594 aaKnown RBP14.33□□□□□ -0.11
COL18A1-201ENST00000342220 NR2F2P24468 414 aa14.33□□□□□ -0.11
COL18A1-201ENST00000342220 CCNE1P24864 410 aa14.33□□□□□ -0.11
COL18A1-201ENST00000342220 PEX3P56589 373 aa14.33□□□□□ -0.11
COL18A1-201ENST00000342220 ERVK-24P63145 666 aa14.33□□□□□ -0.11
COL18A1-201ENST00000342220 PADI6Q6TGC4 694 aa14.33□□□□□ -0.11
COL18A1-201ENST00000342220 SRGAP1Q7Z6B7 1085 aa14.33□□□□□ -0.11
COL18A1-201ENST00000342220 C7orf25Q9BPX7 421 aa14.33□□□□□ -0.11
COL18A1-201ENST00000342220 MOV10L1Q9BXT6 1211 aaKnown RBP14.33□□□□□ -0.11
COL18A1-201ENST00000342220 ABT1Q9ULW3 272 aaKnown RBP14.33□□□□□ -0.11
COL18A1-201ENST00000342220 BICDL2A1A5D9 508 aa14.33□□□□□ -0.12
COL18A1-201ENST00000342220 ATP8B1O43520 1251 aa14.33□□□□□ -0.12
COL18A1-201ENST00000342220 MYCP01106 439 aaPredicted RBP14.33□□□□□ -0.12
COL18A1-201ENST00000342220 SMC1AQ14683 1233 aaKnown RBP14.33□□□□□ -0.12
COL18A1-201ENST00000342220 LY6KQ17RY6 165 aa14.33□□□□□ -0.12
COL18A1-201ENST00000342220 ARSHQ5FYA8 562 aa14.33□□□□□ -0.12
COL18A1-201ENST00000342220 FKBP15Q5T1M5 1219 aa14.33□□□□□ -0.12
COL18A1-201ENST00000342220 USP50Q70EL3 339 aaPredicted RBP14.33□□□□□ -0.12
COL18A1-201ENST00000342220 CACNA2D4Q7Z3S7 1137 aa14.33□□□□□ -0.12
COL18A1-201ENST00000342220 CNGA4Q8IV77 575 aa14.33□□□□□ -0.12
COL18A1-201ENST00000342220 FBXO16Q8IX29 292 aaPredicted RBP14.33□□□□□ -0.12
COL18A1-201ENST00000342220 SLC35F6Q8N357 371 aa14.33□□□□□ -0.12
COL18A1-201ENST00000342220 GOLGA5Q8TBA6 731 aa14.33□□□□□ -0.12
COL18A1-201ENST00000342220 ZBTB10Q96DT7 871 aa14.33□□□□□ -0.12
COL18A1-201ENST00000342220 BICD1Q96G01 975 aa14.33□□□□□ -0.12
COL18A1-201ENST00000342220 PORCNQ9H237 461 aa14.33□□□□□ -0.12
COL18A1-201ENST00000342220 CUEDC2Q9H467 287 aa14.33□□□□□ -0.12
COL18A1-201ENST00000342220 CYP39A1Q9NYL5 469 aa14.33□□□□□ -0.12
COL18A1-201ENST00000342220 C2orf69Q8N8R5 385 aa14.33□□□□□ -0.12
COL18A1-201ENST00000342220 FUT8Q9BYC5 575 aa14.33□□□□□ -0.12
COL18A1-201ENST00000342220 UBXN6Q9BZV1 441 aa14.33□□□□□ -0.12
COL18A1-201ENST00000342220 VAV3Q9UKW4 847 aa14.33□□□□□ -0.12
COL18A1-201ENST00000342220 Q4G0T1 1027 aa14.32□□□□□ -0.12
COL18A1-201ENST00000342220 COPS5Q92905 334 aa14.32□□□□□ -0.12
COL18A1-201ENST00000342220 FAM84AQ96KN4 292 aa14.32□□□□□ -0.12
COL18A1-201ENST00000342220 LRRC27Q9C0I9 530 aa14.32□□□□□ -0.12
COL18A1-201ENST00000342220 CDC23Q9UJX2 597 aa14.32□□□□□ -0.12
COL18A1-201ENST00000342220 TFR2Q9UP52 801 aa14.32□□□□□ -0.12
COL18A1-201ENST00000342220 SLC16A4O15374 487 aa14.32□□□□□ -0.12
COL18A1-201ENST00000342220 PSMD10O75832 226 aa14.32□□□□□ -0.12
COL18A1-201ENST00000342220 MAP3K10Q02779 954 aa14.32□□□□□ -0.12
COL18A1-201ENST00000342220 GNPTABQ3T906 1256 aa14.32□□□□□ -0.12
COL18A1-201ENST00000342220 TDRD12Q587J7 1177 aaKnown RBP14.32□□□□□ -0.12
COL18A1-201ENST00000342220 TMEM63BQ5T3F8 832 aa14.32□□□□□ -0.12
COL18A1-201ENST00000342220 RINT1Q6NUQ1 792 aa14.32□□□□□ -0.12
COL18A1-201ENST00000342220 NACC1Q96RE7 527 aa14.32□□□□□ -0.12
COL18A1-201ENST00000342220 GBA2Q9HCG7 927 aaPredicted RBP14.32□□□□□ -0.12
COL18A1-201ENST00000342220 LIMA1Q9UHB6 759 aaKnown RBP14.32□□□□□ -0.12
COL18A1-201ENST00000342220 CPA4Q9UI42 421 aa14.32□□□□□ -0.12
COL18A1-201ENST00000342220 ZNF157P51786 506 aaPredicted RBP14.31□□□□□ -0.12
COL18A1-201ENST00000342220 LONRF2Q1L5Z9 754 aa14.31□□□□□ -0.12
COL18A1-201ENST00000342220 DPP9Q86TI2 863 aa14.31□□□□□ -0.12
COL18A1-201ENST00000342220 ZNF112Q9UJU3 913 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms