RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 POTEBQ6S5H4 581 aa13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 C1orf54Q8WWF1 131 aa13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 ALG13Q9NP73 1137 aaKnown RBP13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 LARSQ9P2J5 1176 aaKnown RBP13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 RABGAP1Q9Y3P9 1069 aa13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 DLGAP2Q9P1A6 1054 aa13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 CFAP69A5D8W1 941 aa13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 K7ENM7 598 aa13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 PPP2R5DQ14738 602 aa13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 EPM2AIP1Q7L775 607 aaPredicted RBP13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 ERP27Q96DN0 273 aa13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 HOOK2Q96ED9 719 aa13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 TMBIM4Q9HC24 238 aa13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 MYMKA6NI61 221 aa13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 LRIG3Q6UXM1 1119 aa13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 METTL13Q8N6R0 699 aa13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 MAK16Q9BXY0 300 aaKnown RBP13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 CCSER1Q9C0I3 900 aa13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 CCDC87Q9NVE4 849 aa13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 CD163L1Q9NR16 1453 aa13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 USP31Q70CQ4 1352 aa13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 UTYO14607 1347 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 PVALEFA0A1B0GWK0 134 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 PODXLO00592 558 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 GAS7O60861 476 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 MDM2Q00987 491 aaPredicted RBP13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 TMED1Q13445 227 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 TTI2Q6NXR4 508 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 CASC4Q6P4E1 433 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 SFR1Q86XK3 245 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 MAML1Q92585 1016 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 MIEF2Q96C03 454 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 TLR10Q9BXR5 811 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 BFSP1Q12934 665 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 KIAA1755Q5JYT7 1200 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 HAUS1Q96CS2 278 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 SPZ1Q9BXG8 430 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 ARL2BPQ9Y2Y0 163 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 TRPA1O75762 1119 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 UBOX5O94941 541 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 CD19P15391 556 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 YWHAGP61981 247 aaKnown RBP eCLIP13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 DDB1Q16531 1140 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 SWT1Q5T5J6 900 aaKnown RBP13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 SLC17A8Q8NDX2 589 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 TSNARE1Q96NA8 513 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 ERGIC2Q96RQ1 377 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 ZC3H12CQ9C0D7 883 aaKnown RBP13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 LEMD3Q9Y2U8 911 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 HSPA6P17066 643 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 TNNI1P19237 187 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 GALCP54803 685 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 ANKRD20A8PQ5CZ79 823 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 TMEM154Q6P9G4 183 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 SLC4A7Q9Y6M7 1214 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 NPHP3-ACAD11A0A0J9YXS1 232 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 TMEM120BA0PK00 339 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 IRX4P78413 519 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 PTK2Q05397 1052 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 SEPT6Q14141 434 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 ELOA2Q8IYF1 753 aaPredicted RBP13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 C9orf72Q96LT7 481 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 TMEM47Q9BQJ4 181 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 SAYSD1Q9NPB0 183 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 ZFP69BQ9UJL9 534 aa13.49□□□□□ -0.25
SSX2IP-201ENST00000342203 ZNF233A6NK53 670 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 FSBPO95073 299 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 SPARCL1Q14515 664 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 DRAP1Q14919 205 aaPredicted RBP13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 NAB2Q15742 525 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 AGBL2Q5U5Z8 902 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 PIGOQ8TEQ8 1089 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 RUBCNQ92622 972 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 CALR3Q96L12 384 aaKnown RBP13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 HSD3B7Q9H2F3 369 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 G3BP2Q9UN86 482 aaKnown RBP13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 FAF1Q9UNN5 650 aaPredicted RBP13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 DYNLT1P63172 113 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 PIP4K2CQ8TBX8 421 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 RSAD2Q8WXG1 361 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 FAM217BQ9NTX9 383 aaPredicted RBP13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 MAP2P11137 1827 aaKnown RBP13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 TRIM49P0CI25 452 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 TRIM49CP0CI26 452 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 CCND1P24385 295 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 BTDP43251 543 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 CTCFP49711 727 aaPredicted RBP13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 MFSD14BQ5SR56 506 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 RNF168Q8IYW5 571 aaPredicted RBP13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 SPDYE1Q8NFV5 336 aaPredicted RBP13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 RAD54LQ92698 747 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 TTC17Q96AE7 1141 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 DCP1AQ9NPI6 582 aaPredicted RBP13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 MYOM1P52179 1685 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 SHPRHQ149N8 1683 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 SGK1O00141 431 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 ITGA4P13612 1032 aa13.48□□□□□ -0.25
SSX2IP-201ENST00000342203 AMPD2Q01433 879 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms