RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 ZNF618Q5T7W0 954 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 MTHFD1LQ6UB35 978 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 SESTD1Q86VW0 696 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 CEP170P1Q96L14 293 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 LBHD1Q9BQE6 289 aaPredicted RBP14.78□□□□□ -0.04
TUBD1-202ENST00000340993 CSRNP2Q9H175 543 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 WNT8AQ9H1J5 351 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 ZSWIM4Q9H7M6 989 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 POLD4Q9HCU8 107 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 NRBP2Q9NSY0 501 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 KIAA1024Q9UPX6 916 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 TANC1Q9C0D5 1861 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 SIP14410 1827 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 TRIOBPQ9H2D6 2365 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 LAD1O00515 517 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 STBD1O95210 358 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 VTNP04004 478 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 SPATA31C1P0DKV0 1188 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 SLC26A2P50443 739 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 TBC1D8BQ0IIM8 1120 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 DRP2Q13474 957 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 XKR3Q5GH77 459 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 CHRDL2Q6WN34 429 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 USP49Q70CQ1 688 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 FAM167AQ96KS9 214 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 HSD17B14Q9BPX1 270 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 OSBPL7Q9BZF2 842 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 RAB34Q9BZG1 259 aa14.78□□□□□ -0.04
TUBD1-202ENST00000340993 DDX19AQ9NUU7 478 aaKnown RBP14.78□□□□□ -0.04
TUBD1-202ENST00000340993 TIMP1P01033 207 aa14.77□□□□□ -0.05
TUBD1-202ENST00000340993 CKBP12277 381 aa14.77□□□□□ -0.05
TUBD1-202ENST00000340993 PRPHP41219 470 aa14.77□□□□□ -0.05
TUBD1-202ENST00000340993 PTK7Q13308 1070 aa14.77□□□□□ -0.05
TUBD1-202ENST00000340993 KRT79Q5XKE5 535 aa14.77□□□□□ -0.05
TUBD1-202ENST00000340993 SERINC5Q86VE9 423 aa14.77□□□□□ -0.05
TUBD1-202ENST00000340993 IGSF22Q8N9C0 903 aa14.77□□□□□ -0.05
TUBD1-202ENST00000340993 EPSTI1Q96J88 318 aa14.77□□□□□ -0.05
TUBD1-202ENST00000340993 PANK2Q9BZ23 570 aa14.77□□□□□ -0.05
TUBD1-202ENST00000340993 AKT3Q9Y243 479 aa14.77□□□□□ -0.05
TUBD1-202ENST00000340993 RRN3P2A6NIE6 340 aa14.76□□□□□ -0.05
TUBD1-202ENST00000340993 KIAA0355O15063 1070 aa14.76□□□□□ -0.05
TUBD1-202ENST00000340993 SPTLC2O15270 562 aa14.76□□□□□ -0.05
TUBD1-202ENST00000340993 USO1O60763 962 aaKnown RBP14.76□□□□□ -0.05
TUBD1-202ENST00000340993 C22orf31O95567 290 aa14.76□□□□□ -0.05
TUBD1-202ENST00000340993 SSBP05455 408 aaKnown RBP eCLIP14.76□□□□□ -0.05
TUBD1-202ENST00000340993 IBSPP21815 317 aaPredicted RBP14.76□□□□□ -0.05
TUBD1-202ENST00000340993 ADAM17P78536 824 aa14.76□□□□□ -0.05
TUBD1-202ENST00000340993 DHX8Q14562 1220 aaKnown RBP14.76□□□□□ -0.05
TUBD1-202ENST00000340993 ZNF484Q5JVG2 852 aa14.76□□□□□ -0.05
TUBD1-202ENST00000340993 HAUS3Q68CZ6 603 aa14.76□□□□□ -0.05
TUBD1-202ENST00000340993 EFCAB12Q6NXP0 572 aa14.76□□□□□ -0.05
TUBD1-202ENST00000340993 RETREG2Q8NC44 543 aa14.76□□□□□ -0.05
TUBD1-202ENST00000340993 MMTAG2Q9BU76 263 aaKnown RBP14.76□□□□□ -0.05
TUBD1-202ENST00000340993 CYP26B1Q9NR63 512 aa14.76□□□□□ -0.05
TUBD1-202ENST00000340993 FBXO2Q9UK22 296 aaPredicted RBP14.76□□□□□ -0.05
TUBD1-202ENST00000340993 E9PMD0 336 aa14.75□□□□□ -0.05
TUBD1-202ENST00000340993 BMP15O95972 392 aa14.75□□□□□ -0.05
TUBD1-202ENST00000340993 HOXC8P31273 242 aa14.75□□□□□ -0.05
TUBD1-202ENST00000340993 POLGP54098 1239 aaPredicted RBP14.75□□□□□ -0.05
TUBD1-202ENST00000340993 EPHB4P54760 987 aa14.75□□□□□ -0.05
TUBD1-202ENST00000340993 SLC39A14Q15043 492 aa14.75□□□□□ -0.05
TUBD1-202ENST00000340993 KARSQ15046 597 aaKnown RBP14.75□□□□□ -0.05
TUBD1-202ENST00000340993 LRRC8DQ7L1W4 858 aa14.75□□□□□ -0.05
TUBD1-202ENST00000340993 KCNK18Q7Z418 384 aa14.75□□□□□ -0.05
TUBD1-202ENST00000340993 CABP7Q86V35 215 aa14.75□□□□□ -0.05
TUBD1-202ENST00000340993 LINC00301Q8NCQ3 95 aa14.75□□□□□ -0.05
TUBD1-202ENST00000340993 TMEM143Q96AN5 459 aa14.75□□□□□ -0.05
TUBD1-202ENST00000340993 CDK5RAP3Q96JB5 506 aa14.75□□□□□ -0.05
TUBD1-202ENST00000340993 MBLAC1A4D2B0 266 aaPredicted RBP14.75□□□□□ -0.05
TUBD1-202ENST00000340993 DDIT3P35638 169 aa14.75□□□□□ -0.05
TUBD1-202ENST00000340993 ME1P48163 572 aa14.75□□□□□ -0.05
TUBD1-202ENST00000340993 NASPP49321 788 aaPredicted RBP14.75□□□□□ -0.05
TUBD1-202ENST00000340993 FPGSQ05932 587 aa14.75□□□□□ -0.05
TUBD1-202ENST00000340993 RAD51AP2Q09MP3 1159 aa14.75□□□□□ -0.05
TUBD1-202ENST00000340993 BFSP2Q13515 415 aa14.75□□□□□ -0.05
TUBD1-202ENST00000340993 KIZQ2M2Z5 673 aa14.75□□□□□ -0.05
TUBD1-202ENST00000340993 TRIM71Q2Q1W2 868 aaKnown RBP14.75□□□□□ -0.05
TUBD1-202ENST00000340993 ARL6IP4Q66PJ3 421 aaKnown RBP14.75□□□□□ -0.05
TUBD1-202ENST00000340993 C4orf19Q8IY42 314 aa14.75□□□□□ -0.05
TUBD1-202ENST00000340993 SYMPKQ92797 1274 aaKnown RBP14.75□□□□□ -0.05
TUBD1-202ENST00000340993 SCLT1Q96NL6 688 aa14.75□□□□□ -0.05
TUBD1-202ENST00000340993 IQCF3P0C7M6 154 aa14.74□□□□□ -0.05
TUBD1-202ENST00000340993 RPA1P27694 616 aa14.74□□□□□ -0.05
TUBD1-202ENST00000340993 UBA7P41226 1012 aa14.74□□□□□ -0.05
TUBD1-202ENST00000340993 PDIA5Q14554 519 aa14.74□□□□□ -0.05
TUBD1-202ENST00000340993 MFSD5Q6N075 450 aa14.74□□□□□ -0.05
TUBD1-202ENST00000340993 KSR1Q8IVT5 923 aa14.74□□□□□ -0.05
TUBD1-202ENST00000340993 CCDC155Q8N6L0 562 aa14.74□□□□□ -0.05
TUBD1-202ENST00000340993 PDILTQ8N807 584 aa14.74□□□□□ -0.05
TUBD1-202ENST00000340993 KRI1Q8N9T8 703 aaKnown RBP14.74□□□□□ -0.05
TUBD1-202ENST00000340993 NEK9Q8TD19 979 aa14.74□□□□□ -0.05
TUBD1-202ENST00000340993 TNPO1Q92973 898 aaKnown RBP14.74□□□□□ -0.05
TUBD1-202ENST00000340993 PNMA5Q96PV4 448 aa14.74□□□□□ -0.05
TUBD1-202ENST00000340993 POLR3CQ9BUI4 534 aaPredicted RBP14.74□□□□□ -0.05
TUBD1-202ENST00000340993 SEZ6LQ9BYH1 1024 aa14.74□□□□□ -0.05
TUBD1-202ENST00000340993 UBE2OQ9C0C9 1292 aaKnown RBP14.74□□□□□ -0.05
TUBD1-202ENST00000340993 BHMT2Q9H2M3 363 aa14.74□□□□□ -0.05
TUBD1-202ENST00000340993 CDHR5Q9HBB8 845 aa14.74□□□□□ -0.05
TUBD1-202ENST00000340993 TUFT1Q9NNX1 390 aa14.74□□□□□ -0.05
TUBD1-202ENST00000340993 CDY2AQ9Y6F7 541 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms