RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 KCNQ5Q9NR82 932 aa15.69■□□□□ 0.1
CPSF7-201ENST00000340437 MEFVO15553 781 aaPredicted RBP15.69■□□□□ 0.1
CPSF7-201ENST00000340437 SEPT2Q15019 361 aa15.69■□□□□ 0.1
CPSF7-201ENST00000340437 CCDC121Q6ZUS5 278 aa15.69■□□□□ 0.1
CPSF7-201ENST00000340437 TAX1BP1Q86VP1 789 aa15.69■□□□□ 0.1
CPSF7-201ENST00000340437 JPH2Q9BR39 696 aaPredicted RBP15.69■□□□□ 0.1
CPSF7-201ENST00000340437 CNTNAP4Q9C0A0 1308 aa15.68■□□□□ 0.1
CPSF7-201ENST00000340437 CALUO43852 315 aaPredicted RBP15.68■□□□□ 0.1
CPSF7-201ENST00000340437 CFBP00751 764 aa15.68■□□□□ 0.1
CPSF7-201ENST00000340437 PLTPP55058 493 aa15.68■□□□□ 0.1
CPSF7-201ENST00000340437 IFI16Q16666 785 aaKnown RBP15.68■□□□□ 0.1
CPSF7-201ENST00000340437 COBLL1Q53SF7 1204 aa15.68■□□□□ 0.1
CPSF7-201ENST00000340437 KDM7AQ6ZMT4 941 aa15.68■□□□□ 0.1
CPSF7-201ENST00000340437 CCDC25Q86WR0 208 aa15.68■□□□□ 0.1
CPSF7-201ENST00000340437 TPCN2Q8NHX9 752 aa15.68■□□□□ 0.1
CPSF7-201ENST00000340437 RBM17Q96I25 401 aaKnown RBP15.68■□□□□ 0.1
CPSF7-201ENST00000340437 CABS1Q96KC9 395 aa15.68■□□□□ 0.1
CPSF7-201ENST00000340437 DBNDD1Q9H9R9 158 aa15.68■□□□□ 0.1
CPSF7-201ENST00000340437 AIPL1Q9NZN9 384 aa15.68■□□□□ 0.1
CPSF7-201ENST00000340437 USP11P51784 963 aa15.68■□□□□ 0.1
CPSF7-201ENST00000340437 SKOR1P84550 965 aa15.68■□□□□ 0.1
CPSF7-201ENST00000340437 CHADLQ6NUI6 762 aa15.68■□□□□ 0.1
CPSF7-201ENST00000340437 ZNF746Q6NUN9 644 aaPredicted RBP15.68■□□□□ 0.1
CPSF7-201ENST00000340437 MICALCLQ6ZW33 695 aa15.68■□□□□ 0.1
CPSF7-201ENST00000340437 ZNF572Q7Z3I7 529 aaPredicted RBP15.68■□□□□ 0.1
CPSF7-201ENST00000340437 PCIF1Q9H4Z3 704 aa15.68■□□□□ 0.1
CPSF7-201ENST00000340437 AMFRQ9UKV5 643 aa15.68■□□□□ 0.1
CPSF7-201ENST00000340437 SNX24Q9Y343 169 aa15.68■□□□□ 0.1
CPSF7-201ENST00000340437 UTP11Q9Y3A2 253 aaKnown RBP15.68■□□□□ 0.1
CPSF7-201ENST00000340437 XIRP1Q702N8 1843 aaKnown RBP15.67■□□□□ 0.1
CPSF7-201ENST00000340437 SHMT1P34896 483 aa15.67■□□□□ 0.1
CPSF7-201ENST00000340437 STAT1P42224 750 aa15.67■□□□□ 0.1
CPSF7-201ENST00000340437 CEP57Q86XR8 500 aa15.67■□□□□ 0.1
CPSF7-201ENST00000340437 SYCP3Q8IZU3 236 aa15.67■□□□□ 0.1
CPSF7-201ENST00000340437 ELMO3Q96BJ8 720 aa15.67■□□□□ 0.1
CPSF7-201ENST00000340437 LRRC45Q96CN5 670 aa15.67■□□□□ 0.1
CPSF7-201ENST00000340437 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.67■□□□□ 0.11e-7■■■■□ 22.8
CPSF7-201ENST00000340437 ZBTB21Q9ULJ3 1066 aa15.67■□□□□ 0.1
CPSF7-201ENST00000340437 PCDHA2Q9Y5H9 948 aa15.67■□□□□ 0.1
CPSF7-201ENST00000340437 IRS2Q9Y4H2 1338 aa15.67■□□□□ 0.1
CPSF7-201ENST00000340437 NHSL1Q5SYE7 1610 aa15.67■□□□□ 0.1
CPSF7-201ENST00000340437 TRIM37O94972 964 aa15.67■□□□□ 0.1
CPSF7-201ENST00000340437 POLD1P28340 1107 aa15.67■□□□□ 0.1
CPSF7-201ENST00000340437 ACTN3Q08043 901 aaPredicted RBP15.67■□□□□ 0.1
CPSF7-201ENST00000340437 ISCUQ9H1K1 167 aa15.67■□□□□ 0.1
CPSF7-201ENST00000340437 CD248Q9HCU0 757 aa15.67■□□□□ 0.1
CPSF7-201ENST00000340437 ABCB11O95342 1321 aa15.67■□□□□ 0.1
CPSF7-201ENST00000340437 FAM86B1E9PN63 330 aa15.67■□□□□ 0.1
CPSF7-201ENST00000340437 RBAK-RBAKDNI3L0D1 243 aa15.67■□□□□ 0.1
CPSF7-201ENST00000340437 DDX3XO00571 662 aaKnown RBP eCLIP15.67■□□□□ 0.12e-6■■■□□ 16.2
CPSF7-201ENST00000340437 EVI5O60447 810 aa15.67■□□□□ 0.1
CPSF7-201ENST00000340437 FAM86B2P0C5J1 330 aa15.67■□□□□ 0.1
CPSF7-201ENST00000340437 SLC12A3P55017 1021 aa15.67■□□□□ 0.1
CPSF7-201ENST00000340437 UAP1Q16222 522 aaPredicted RBP15.67■□□□□ 0.1
CPSF7-201ENST00000340437 CERS5Q8N5B7 392 aa15.67■□□□□ 0.1
CPSF7-201ENST00000340437 HMGB1P1B2RPK0 211 aaPredicted RBP15.66■□□□□ 0.1
CPSF7-201ENST00000340437 BUB1BO60566 1050 aaPredicted RBP15.66■□□□□ 0.1
CPSF7-201ENST00000340437 GPATCH4Q5T3I0 446 aaKnown RBP15.66■□□□□ 0.1
CPSF7-201ENST00000340437 FAM186BQ8IYM0 893 aa15.66■□□□□ 0.1
CPSF7-201ENST00000340437 CCDC26Q8TAB7 109 aa15.66■□□□□ 0.1
CPSF7-201ENST00000340437 SLC35G2Q8TBE7 412 aa15.66■□□□□ 0.1
CPSF7-201ENST00000340437 SYN2Q92777 582 aaPredicted RBP15.66■□□□□ 0.1
CPSF7-201ENST00000340437 P2RX7Q99572 595 aaKnown RBP15.66■□□□□ 0.1
CPSF7-201ENST00000340437 RABGAP1Q9Y3P9 1069 aa15.66■□□□□ 0.1
CPSF7-201ENST00000340437 PHLPP1O60346 1717 aa15.66■□□□□ 0.1
CPSF7-201ENST00000340437 GCFC2P16383 781 aaKnown RBP15.66■□□□□ 0.1
CPSF7-201ENST00000340437 TNFAIP3P21580 790 aa15.66■□□□□ 0.1
CPSF7-201ENST00000340437 ZNF844Q08AG5 666 aa15.66■□□□□ 0.1
CPSF7-201ENST00000340437 ITGB3BPQ13352 177 aaPredicted RBP15.66■□□□□ 0.1
CPSF7-201ENST00000340437 DRAP1Q14919 205 aaPredicted RBP15.66■□□□□ 0.1
CPSF7-201ENST00000340437 QPCTQ16769 361 aa15.66■□□□□ 0.1
CPSF7-201ENST00000340437 NBPF9Q3BBW0 867 aa15.66■□□□□ 0.1
CPSF7-201ENST00000340437 CERKLQ49MI3 558 aaPredicted RBP15.66■□□□□ 0.1
CPSF7-201ENST00000340437 CDC42EP5Q6NZY7 148 aa15.66■□□□□ 0.1
CPSF7-201ENST00000340437 TBC1D22AQ8WUA7 517 aa15.66■□□□□ 0.1
CPSF7-201ENST00000340437 CTNNBL1Q8WYA6 563 aaPredicted RBP15.66■□□□□ 0.1
CPSF7-201ENST00000340437 SCLT1Q96NL6 688 aa15.66■□□□□ 0.1
CPSF7-201ENST00000340437 TMBIM4Q9HC24 238 aa15.66■□□□□ 0.1
CPSF7-201ENST00000340437 DNAJC12Q9UKB3 198 aa15.66■□□□□ 0.1
CPSF7-201ENST00000340437 PPP1R9AQ9ULJ8 1098 aa15.66■□□□□ 0.1
CPSF7-201ENST00000340437 PTPN22Q9Y2R2 807 aa15.66■□□□□ 0.1
CPSF7-201ENST00000340437 hCG_1984214I3L0E3 225 aa15.66■□□□□ 0.1
CPSF7-201ENST00000340437 RPL13P26373 211 aaKnown RBP15.66■□□□□ 0.1
CPSF7-201ENST00000340437 IFNAR2P48551 515 aa15.66■□□□□ 0.1
CPSF7-201ENST00000340437 CCDC174Q6PII3 467 aa15.66■□□□□ 0.1
CPSF7-201ENST00000340437 ZNF713Q8N859 430 aaPredicted RBP15.66■□□□□ 0.1
CPSF7-201ENST00000340437 LMBR1Q8WVP7 490 aa15.66■□□□□ 0.1
CPSF7-201ENST00000340437 PBKQ96KB5 322 aa15.66■□□□□ 0.1
CPSF7-201ENST00000340437 TAS2R14Q9NYV8 317 aa15.66■□□□□ 0.1
CPSF7-201ENST00000340437 CNOT8Q9UFF9 292 aaKnown RBP15.66■□□□□ 0.1
CPSF7-201ENST00000340437 HOXD13P35453 343 aa15.65■□□□□ 0.1
CPSF7-201ENST00000340437 CDR1P51861 262 aa15.65■□□□□ 0.1
CPSF7-201ENST00000340437 CYFIP2Q96F07 1278 aa15.65■□□□□ 0.1
CPSF7-201ENST00000340437 EML1O00423 815 aa15.65■□□□□ 0.1
CPSF7-201ENST00000340437 TOM1O60784 492 aa15.65■□□□□ 0.1
CPSF7-201ENST00000340437 SMARCA1P28370 1054 aa15.65■□□□□ 0.1
CPSF7-201ENST00000340437 ORC2Q13416 577 aaPredicted RBP15.65■□□□□ 0.1
CPSF7-201ENST00000340437 PPP1R12BO60237 982 aaPredicted RBP15.65■□□□□ 0.1
CPSF7-201ENST00000340437 IRX3P78415 501 aaPredicted RBP15.65■□□□□ 0.1
CPSF7-201ENST00000340437 PHLDB2Q86SQ0 1253 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms