RNA–Protein interactions for RNA: ENST00000339948.3

ZNF648-201, Transcript of zinc finger protein 648, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF648, Length 3,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF648-201ENST00000339948 LONRF1Q17RB8 773 aa12.61□□□□□ -0.39
ZNF648-201ENST00000339948 FIGNQ5HY92 759 aa12.61□□□□□ -0.39
ZNF648-201ENST00000339948 UBAP2Q5T6F2 1119 aaKnown RBP12.61□□□□□ -0.39
ZNF648-201ENST00000339948 INTS5Q6P9B9 1019 aaKnown RBP12.61□□□□□ -0.39
ZNF648-201ENST00000339948 MYCT1Q8N699 235 aa12.61□□□□□ -0.39
ZNF648-201ENST00000339948 XPO6Q96QU8 1125 aaKnown RBP12.61□□□□□ -0.39
ZNF648-201ENST00000339948 BHMT2Q9H2M3 363 aa12.61□□□□□ -0.39
ZNF648-201ENST00000339948 PCIF1Q9H4Z3 704 aa12.61□□□□□ -0.39
ZNF648-201ENST00000339948 RIC8AQ9NPQ8 531 aa12.61□□□□□ -0.39
ZNF648-201ENST00000339948 SPOPO43791 374 aa12.61□□□□□ -0.39
ZNF648-201ENST00000339948 TRIM37O94972 964 aa12.61□□□□□ -0.39
ZNF648-201ENST00000339948 HOXA13P31271 388 aaPredicted RBP12.61□□□□□ -0.39
ZNF648-201ENST00000339948 CACNB3P54284 484 aa12.61□□□□□ -0.39
ZNF648-201ENST00000339948 MTMR3Q13615 1198 aa12.61□□□□□ -0.39
ZNF648-201ENST00000339948 TPH2Q8IWU9 490 aa12.61□□□□□ -0.39
ZNF648-201ENST00000339948 NSMCE1Q8WV22 266 aa12.61□□□□□ -0.39
ZNF648-201ENST00000339948 LMBR1Q8WVP7 490 aa12.61□□□□□ -0.39
ZNF648-201ENST00000339948 NOD2Q9HC29 1040 aa12.61□□□□□ -0.39
ZNF648-201ENST00000339948 SH3GLB2Q9NR46 395 aa12.61□□□□□ -0.39
ZNF648-201ENST00000339948 RNF14Q9UBS8 474 aa12.61□□□□□ -0.39
ZNF648-201ENST00000339948 STK17AQ9UEE5 414 aa12.61□□□□□ -0.39
ZNF648-201ENST00000339948 ASIC3Q9UHC3 531 aa12.61□□□□□ -0.39
ZNF648-201ENST00000339948 THRAP3Q9Y2W1 955 aaKnown RBP12.61□□□□□ -0.39
ZNF648-201ENST00000339948 MARF1Q9Y4F3 1742 aaKnown RBP12.6□□□□□ -0.39
ZNF648-201ENST00000339948 UFL1O94874 794 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 NFIXQ14938 502 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 NAIF1Q69YI7 327 aaPredicted RBP12.6□□□□□ -0.39
ZNF648-201ENST00000339948 SLC17A8Q8NDX2 589 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 KLHL29Q96CT2 875 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 C18orf8Q96DM3 657 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 BTBD6Q96KE9 485 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 TRIM33Q9UPN9 1127 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 PVALEFA0A1B0GWK0 134 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 GNPATO15228 680 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 TRAPPC3O43617 180 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 HSPA9P38646 679 aaKnown RBP12.6□□□□□ -0.39
ZNF648-201ENST00000339948 USP11P51784 963 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 CDK17Q00537 523 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 MTM1Q13496 603 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 CUL1Q13616 776 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 ZC2HC1CQ53FD0 456 aaPredicted RBP12.6□□□□□ -0.39
ZNF648-201ENST00000339948 MFSD14BQ5SR56 506 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 HOOK3Q86VS8 718 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 NEK9Q8TD19 979 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 ZNF526Q8TF50 670 aaPredicted RBP12.6□□□□□ -0.39
ZNF648-201ENST00000339948 SCFD1Q8WVM8 642 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 MTFR1LQ9H019 292 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 SEMA4AQ9H3S1 761 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 PLCB1Q9NQ66 1216 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 ABCF3Q9NUQ8 709 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 FGFR1OP2Q9NVK5 253 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 PPP1R9AQ9ULJ8 1098 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 A8MUI8 341 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 RFC4P35249 363 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 PRPHP41219 470 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 PPP4R3AQ6IN85 833 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 TPCN2Q8NHX9 752 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 SLC35G2Q8TBE7 412 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 MXD3Q9BW11 206 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 MAGEF1Q9HAY2 307 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 RGL1Q9NZL6 768 aa12.6□□□□□ -0.39
ZNF648-201ENST00000339948 FAM13AO94988 1023 aa12.59□□□□□ -0.39
ZNF648-201ENST00000339948 SPDL1Q96EA4 605 aa12.59□□□□□ -0.39
ZNF648-201ENST00000339948 LRRC27Q9C0I9 530 aa12.59□□□□□ -0.39
ZNF648-201ENST00000339948 YIPF3Q9GZM5 350 aa12.59□□□□□ -0.39
ZNF648-201ENST00000339948 NUCKS1Q9H1E3 243 aaKnown RBP12.59□□□□□ -0.39
ZNF648-201ENST00000339948 ACTR5Q9H9F9 607 aaPredicted RBP12.59□□□□□ -0.39
ZNF648-201ENST00000339948 SWAP70Q9UH65 585 aa12.59□□□□□ -0.39
ZNF648-201ENST00000339948 PALM3A6NDB9 673 aaPredicted RBP12.59□□□□□ -0.39
ZNF648-201ENST00000339948 PCP11498 1178 aaKnown RBP12.59□□□□□ -0.39
ZNF648-201ENST00000339948 PMS2P54278 862 aa12.59□□□□□ -0.39
ZNF648-201ENST00000339948 CTTNQ14247 550 aaKnown RBP12.59□□□□□ -0.39
ZNF648-201ENST00000339948 GRIPAP1Q4V328 841 aa12.59□□□□□ -0.39
ZNF648-201ENST00000339948 PBKQ96KB5 322 aa12.59□□□□□ -0.39
ZNF648-201ENST00000339948 ACP6Q9NPH0 428 aa12.59□□□□□ -0.39
ZNF648-201ENST00000339948 TCP11X1B4DZS4 312 aa12.58□□□□□ -0.39
ZNF648-201ENST00000339948 NMT1P30419 496 aaKnown RBP12.58□□□□□ -0.39
ZNF648-201ENST00000339948 MRPL12P52815 198 aaKnown RBP12.58□□□□□ -0.39
ZNF648-201ENST00000339948 KCNJ2P63252 427 aa12.58□□□□□ -0.39
ZNF648-201ENST00000339948 TMC3Q7Z5M5 1100 aa12.58□□□□□ -0.39
ZNF648-201ENST00000339948 POP1Q99575 1024 aaKnown RBP12.58□□□□□ -0.39
ZNF648-201ENST00000339948 AJAP1Q9UKB5 411 aaPredicted RBP12.58□□□□□ -0.39
ZNF648-201ENST00000339948 DNM3Q9UQ16 869 aa12.58□□□□□ -0.39
ZNF648-201ENST00000339948 F8VZ95 297 aa12.58□□□□□ -0.4
ZNF648-201ENST00000339948 PJA2O43164 708 aa12.58□□□□□ -0.4
ZNF648-201ENST00000339948 EVI5O60447 810 aa12.58□□□□□ -0.4
ZNF648-201ENST00000339948 AKR1B1P15121 316 aa12.58□□□□□ -0.4
ZNF648-201ENST00000339948 GALNT17Q6IS24 598 aa12.58□□□□□ -0.4
ZNF648-201ENST00000339948 SPICE1Q8N0Z3 855 aa12.58□□□□□ -0.4
ZNF648-201ENST00000339948 CUL5Q93034 780 aa12.58□□□□□ -0.4
ZNF648-201ENST00000339948 ERVK-5Q9HDB9 667 aa12.58□□□□□ -0.4
ZNF648-201ENST00000339948 TAS2R14Q9NYV8 317 aa12.58□□□□□ -0.4
ZNF648-201ENST00000339948 PCDHA1Q9Y5I3 950 aa12.58□□□□□ -0.4
ZNF648-201ENST00000339948 A0A1W2PRG0 241 aa12.58□□□□□ -0.4
ZNF648-201ENST00000339948 ZBTB39O15060 712 aa12.58□□□□□ -0.4
ZNF648-201ENST00000339948 AKAP3O75969 853 aa12.58□□□□□ -0.4
ZNF648-201ENST00000339948 LDHCP07864 332 aa12.58□□□□□ -0.4
ZNF648-201ENST00000339948 BIRC3Q13489 604 aa12.58□□□□□ -0.4
ZNF648-201ENST00000339948 ZNF449Q6P9G9 518 aa12.58□□□□□ -0.4
ZNF648-201ENST00000339948 RAB17Q9H0T7 212 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms