RNA–Protein interactions for RNA: ENST00000339598.7

OTOF-203, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-203ENST00000339598 PITPNM3Q9BZ71 974 aa13.42□□□□□ -0.26
OTOF-203ENST00000339598 QTRT2Q9H974 415 aaKnown RBP13.42□□□□□ -0.26
OTOF-203ENST00000339598 HDAC6Q9UBN7 1215 aa13.42□□□□□ -0.26
OTOF-203ENST00000339598 TRPC5Q9UL62 973 aaPredicted RBP13.42□□□□□ -0.26
OTOF-203ENST00000339598 ASNSP08243 561 aa13.42□□□□□ -0.26
OTOF-203ENST00000339598 SRGAP2BP0DMP2 458 aa13.42□□□□□ -0.26
OTOF-203ENST00000339598 CCND2P30279 289 aa13.42□□□□□ -0.26
OTOF-203ENST00000339598 NFRKBQ6P4R8 1299 aa13.42□□□□□ -0.26
OTOF-203ENST00000339598 STOX1Q6ZVD7 989 aa13.42□□□□□ -0.26
OTOF-203ENST00000339598 ATP6V1E2Q96A05 226 aa13.42□□□□□ -0.26
OTOF-203ENST00000339598 THOC1Q96FV9 657 aaKnown RBP13.42□□□□□ -0.26
OTOF-203ENST00000339598 DDX47Q9H0S4 455 aaKnown RBP13.42□□□□□ -0.26
OTOF-203ENST00000339598 PALLDQ8WX93 1383 aa13.42□□□□□ -0.26
OTOF-203ENST00000339598 FAM196BA6NMK8 535 aa13.42□□□□□ -0.26
OTOF-203ENST00000339598 SPECC1L-ADORA2AF8WAN1 911 aa13.42□□□□□ -0.26
OTOF-203ENST00000339598 GGCXP38435 758 aa13.42□□□□□ -0.26
OTOF-203ENST00000339598 TSGA10IPQ3SY00 556 aa13.42□□□□□ -0.26
OTOF-203ENST00000339598 HEXIM2Q96MH2 286 aaKnown RBP13.42□□□□□ -0.26
OTOF-203ENST00000339598 ESYT2A0FGR8 921 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 MMEP08473 750 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 GUF1Q8N442 669 aaKnown RBP13.41□□□□□ -0.26
OTOF-203ENST00000339598 CD209Q9NNX6 404 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 ADGBQ8N7X0 1667 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 KIF28PB7ZC32 967 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 ZNF18P17022 549 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 COASYQ13057 564 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 HSP90AA5PQ58FG0 334 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 FAM47EQ6ZV65 393 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 OSBPL9Q96SU4 736 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 PPP1R16BQ96T49 567 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 TMEM260Q9NX78 707 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 EPS15L1Q9UBC2 864 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 SCINQ9Y6U3 715 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 SYNGAP1Q96PV0 1343 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 USP17L10C9JJH3 530 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 MTF1Q14872 753 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 CDO1Q16878 200 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 SLFN12LQ6IEE8 588 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 SPOPLQ6IQ16 392 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 LRRC43Q8N309 656 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 HVCN1Q96D96 273 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 ZNF341Q9BYN7 854 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 IRX2Q9BZI1 471 aaPredicted RBP13.41□□□□□ -0.26
OTOF-203ENST00000339598 ZWILCHQ9H900 591 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 SAYSD1Q9NPB0 183 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 FAF1Q9UNN5 650 aaPredicted RBP13.41□□□□□ -0.26
OTOF-203ENST00000339598 FNDC3AQ9Y2H6 1198 aaKnown RBP13.41□□□□□ -0.26
OTOF-203ENST00000339598 FIS1Q9Y3D6 152 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 GOLGA8QA0A0J9YX86 632 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 GOLGA8OA6NCC3 632 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 GOLGA8NF8WBI6 632 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 NCK2O43639 380 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 MGEA5O60502 916 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 GPC5P78333 572 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 MYO1EQ12965 1108 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 ZNF211Q13398 564 aaPredicted RBP13.41□□□□□ -0.26
OTOF-203ENST00000339598 TAF11Q15544 211 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 PPP6R3Q5H9R7 873 aaPredicted RBP13.41□□□□□ -0.26
OTOF-203ENST00000339598 PADI6Q6TGC4 694 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 DHX40Q8IX18 779 aaKnown RBP13.41□□□□□ -0.26
OTOF-203ENST00000339598 RAD54LQ92698 747 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 FAM20AQ96MK3 541 aa13.41□□□□□ -0.26
OTOF-203ENST00000339598 IPO5O00410 1097 aaKnown RBP13.4□□□□□ -0.26
OTOF-203ENST00000339598 RPS6KA4O75676 772 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 TSTA3Q13630 321 aaPredicted RBP13.4□□□□□ -0.26
OTOF-203ENST00000339598 SKIP12755 728 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 NKX1-1Q15270 411 aaPredicted RBP13.4□□□□□ -0.26
OTOF-203ENST00000339598 SURF1Q15526 300 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 KNOP1Q1ED39 458 aaKnown RBP13.4□□□□□ -0.26
OTOF-203ENST00000339598 TMTC4Q5T4D3 741 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 RNF207Q6ZRF8 634 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 TMEM35BQ8NCS4 154 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 MAML1Q92585 1016 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 DPF2Q92785 391 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 WDR24Q96S15 920 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 TRIM56Q9BRZ2 755 aaKnown RBP13.4□□□□□ -0.26
OTOF-203ENST00000339598 CACYBPQ9HB71 228 aaKnown RBP13.4□□□□□ -0.26
OTOF-203ENST00000339598 TJP3O95049 919 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 PLS3P13797 630 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 PSMA2P25787 234 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 CASP2P42575 452 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 ZNF667Q5HYK9 610 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 SRRM1Q8IYB3 904 aaKnown RBP13.4□□□□□ -0.26
OTOF-203ENST00000339598 RMDN3Q96TC7 470 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 RPF1Q9H9Y2 349 aaKnown RBP13.4□□□□□ -0.26
OTOF-203ENST00000339598 PRDM15P57071 1507 aaPredicted RBP13.4□□□□□ -0.26
OTOF-203ENST00000339598 POTEFA5A3E0 1075 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 MAPK13O15264 365 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 KRT37O76014 449 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 MMP10P09238 476 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 POTEIP0CG38 1075 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 MARK3P27448 753 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 MAGOHP61326 146 aaKnown RBP13.4□□□□□ -0.26
OTOF-203ENST00000339598 POTEGQ6S5H5 508 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 POTEEQ6S8J3 1075 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 RAB44Q7Z6P3 723 aaPredicted RBP13.4□□□□□ -0.26
OTOF-203ENST00000339598 ABI1Q8IZP0 508 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 CFAP36Q96G28 342 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 ISCA1Q9BUE6 129 aa13.4□□□□□ -0.26
OTOF-203ENST00000339598 TUBB6Q9BUF5 446 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms