RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 FBXO28Q9NVF7 368 aa17.93■□□□□ 0.46
LITAF-201ENST00000339430 FRMD3A2A2Y4 597 aa17.92■□□□□ 0.46
LITAF-201ENST00000339430 MSH4O15457 936 aa17.92■□□□□ 0.46
LITAF-201ENST00000339430 PRPF6O94906 941 aaKnown RBP17.92■□□□□ 0.46
LITAF-201ENST00000339430 MYBP10242 640 aa17.92■□□□□ 0.46
LITAF-201ENST00000339430 NF2P35240 595 aa17.92■□□□□ 0.46
LITAF-201ENST00000339430 ZNF76P36508 570 aa17.92■□□□□ 0.46
LITAF-201ENST00000339430 KCNH2Q12809 1159 aa17.92■□□□□ 0.46
LITAF-201ENST00000339430 MAPK8IP2Q13387 824 aaPredicted RBP17.92■□□□□ 0.46
LITAF-201ENST00000339430 Q4G0T1 1027 aa17.92■□□□□ 0.46
LITAF-201ENST00000339430 NOL9Q5SY16 702 aaKnown RBP17.92■□□□□ 0.46
LITAF-201ENST00000339430 MOXD1Q6UVY6 613 aa17.92■□□□□ 0.46
LITAF-201ENST00000339430 CHURC1Q8WUH1 139 aa17.92■□□□□ 0.46
LITAF-201ENST00000339430 LPAR1Q92633 364 aa17.92■□□□□ 0.46
LITAF-201ENST00000339430 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.92■□□□□ 0.46
LITAF-201ENST00000339430 EDEM3Q9BZQ6 932 aa17.92■□□□□ 0.46
LITAF-201ENST00000339430 RRAGCQ9HB90 399 aa17.92■□□□□ 0.46
LITAF-201ENST00000339430 SSU72P8A0A1W2PR75 194 aa17.91■□□□□ 0.46
LITAF-201ENST00000339430 CCDC66A2RUB6 948 aa17.91■□□□□ 0.46
LITAF-201ENST00000339430 CETN3O15182 167 aa17.91■□□□□ 0.46
LITAF-201ENST00000339430 RPA1P27694 616 aa17.91■□□□□ 0.46
LITAF-201ENST00000339430 SREBF1P36956 1147 aa17.91■□□□□ 0.46
LITAF-201ENST00000339430 LMAN1P49257 510 aa17.91■□□□□ 0.46
LITAF-201ENST00000339430 DNA2P51530 1060 aa17.91■□□□□ 0.46
LITAF-201ENST00000339430 BACE1P56817 501 aa17.91■□□□□ 0.46
LITAF-201ENST00000339430 MAP1SQ66K74 1059 aaPredicted RBP17.91■□□□□ 0.46
LITAF-201ENST00000339430 MOB2Q70IA6 237 aa17.91■□□□□ 0.46
LITAF-201ENST00000339430 FAM133AQ8N9E0 248 aa17.91■□□□□ 0.46
LITAF-201ENST00000339430 TBC1D5Q92609 795 aa17.91■□□□□ 0.46
LITAF-201ENST00000339430 TARSL2A2RTX5 802 aaKnown RBP17.91■□□□□ 0.46
LITAF-201ENST00000339430 PJA2O43164 708 aa17.91■□□□□ 0.46
LITAF-201ENST00000339430 SERPING1P05155 500 aa17.91■□□□□ 0.46
LITAF-201ENST00000339430 ACTN1P12814 892 aa17.91■□□□□ 0.46
LITAF-201ENST00000339430 MARSP56192 900 aaKnown RBP17.91■□□□□ 0.46
LITAF-201ENST00000339430 TTLL12Q14166 644 aaPredicted RBP17.91■□□□□ 0.46
LITAF-201ENST00000339430 SYT2Q8N9I0 419 aaPredicted RBP17.91■□□□□ 0.46
LITAF-201ENST00000339430 HDAC7Q8WUI4 952 aa17.91■□□□□ 0.46
LITAF-201ENST00000339430 BHMT2Q9H2M3 363 aa17.91■□□□□ 0.46
LITAF-201ENST00000339430 RGL1Q9NZL6 768 aa17.91■□□□□ 0.46
LITAF-201ENST00000339430 FEM1BQ9UK73 627 aa17.91■□□□□ 0.46
LITAF-201ENST00000339430 SNCAIPQ9Y6H5 919 aa17.91■□□□□ 0.46
LITAF-201ENST00000339430 WDR46O15213 610 aaKnown RBP17.9■□□□□ 0.46
LITAF-201ENST00000339430 HOXD13P35453 343 aa17.9■□□□□ 0.46
LITAF-201ENST00000339430 IREB2P48200 963 aaKnown RBP17.9■□□□□ 0.46
LITAF-201ENST00000339430 HSP90B2PQ58FF3 399 aa17.9■□□□□ 0.46
LITAF-201ENST00000339430 ZFP91Q96JP5 570 aaPredicted RBP17.9■□□□□ 0.46
LITAF-201ENST00000339430 LRRC1Q9BTT6 524 aa17.9■□□□□ 0.46
LITAF-201ENST00000339430 HYOU1Q9Y4L1 999 aa17.9■□□□□ 0.46
LITAF-201ENST00000339430 SFI1A8K8P3 1242 aa17.9■□□□□ 0.46
LITAF-201ENST00000339430 EML1O00423 815 aa17.9■□□□□ 0.46
LITAF-201ENST00000339430 VCAM1P19320 739 aa17.9■□□□□ 0.46
LITAF-201ENST00000339430 MCM3P25205 808 aa17.9■□□□□ 0.46
LITAF-201ENST00000339430 HMGCS2P54868 508 aa17.9■□□□□ 0.46
LITAF-201ENST00000339430 MAP9Q49MG5 647 aa17.9■□□□□ 0.46
LITAF-201ENST00000339430 IQCEQ6IPM2 695 aa17.9■□□□□ 0.46
LITAF-201ENST00000339430 NOX5Q96PH1 765 aa17.9■□□□□ 0.46
LITAF-201ENST00000339430 CSADQ9Y600 493 aa17.9■□□□□ 0.46
LITAF-201ENST00000339430 TBX3O15119 743 aa17.89■□□□□ 0.45
LITAF-201ENST00000339430 PLA2G6O60733 806 aa17.89■□□□□ 0.45
LITAF-201ENST00000339430 FOSP01100 380 aaPredicted RBP17.89■□□□□ 0.45
LITAF-201ENST00000339430 SLC9A1P19634 815 aa17.89■□□□□ 0.45
LITAF-201ENST00000339430 UBXN2AP68543 259 aa17.89■□□□□ 0.45
LITAF-201ENST00000339430 SLC7A5Q01650 507 aa17.89■□□□□ 0.45
LITAF-201ENST00000339430 EDRF1Q3B7T1 1238 aa17.89■□□□□ 0.45
LITAF-201ENST00000339430 DCAF17Q5H9S7 520 aaPredicted RBP17.89■□□□□ 0.45
LITAF-201ENST00000339430 CCDC181Q5TID7 509 aa17.89■□□□□ 0.45
LITAF-201ENST00000339430 KLHDC7AQ5VTJ3 777 aa17.89■□□□□ 0.45
LITAF-201ENST00000339430 FAM160B2Q86V87 743 aa17.89■□□□□ 0.45
LITAF-201ENST00000339430 SPATA4Q8NEY3 305 aa17.89■□□□□ 0.45
LITAF-201ENST00000339430 PIGOQ8TEQ8 1089 aa17.89■□□□□ 0.45
LITAF-201ENST00000339430 MS4A14Q96JA4 679 aa17.89■□□□□ 0.45
LITAF-201ENST00000339430 RUSC1Q9BVN2 902 aa17.89■□□□□ 0.45
LITAF-201ENST00000339430 VAV3Q9UKW4 847 aa17.89■□□□□ 0.45
LITAF-201ENST00000339430 FAM184BQ9ULE4 1060 aa17.89■□□□□ 0.45
LITAF-201ENST00000339430 PHIPQ8WWQ0 1821 aa17.89■□□□□ 0.45
LITAF-201ENST00000339430 CHMP2AO43633 222 aa17.89■□□□□ 0.45
LITAF-201ENST00000339430 CFBP00751 764 aa17.89■□□□□ 0.45
LITAF-201ENST00000339430 HNRNPH2P55795 449 aaKnown RBP17.89■□□□□ 0.45
LITAF-201ENST00000339430 KNOP1Q1ED39 458 aaKnown RBP17.89■□□□□ 0.45
LITAF-201ENST00000339430 CCDC174Q6PII3 467 aa17.89■□□□□ 0.45
LITAF-201ENST00000339430 MSL3Q8N5Y2 521 aaKnown RBP17.89■□□□□ 0.45
LITAF-201ENST00000339430 CNKSR2Q8WXI2 1034 aa17.89■□□□□ 0.45
LITAF-201ENST00000339430 EIF2AK1Q9BQI3 630 aaKnown RBP17.89■□□□□ 0.45
LITAF-201ENST00000339430 TLR10Q9BXR5 811 aa17.89■□□□□ 0.45
LITAF-201ENST00000339430 PACSIN1Q9BY11 444 aa17.89■□□□□ 0.45
LITAF-201ENST00000339430 NUCKS1Q9H1E3 243 aaKnown RBP17.89■□□□□ 0.45
LITAF-201ENST00000339430 GANQ9H2C0 597 aa17.89■□□□□ 0.45
LITAF-201ENST00000339430 ADAMTS1Q9UHI8 967 aa17.89■□□□□ 0.45
LITAF-201ENST00000339430 AFG3L2Q9Y4W6 797 aa17.89■□□□□ 0.45
LITAF-201ENST00000339430 A0A087X0T9 212 aa17.88■□□□□ 0.45
LITAF-201ENST00000339430 DCAF8L1A6NGE4 600 aa17.88■□□□□ 0.45
LITAF-201ENST00000339430 FAM228BP0C875 321 aa17.88■□□□□ 0.45
LITAF-201ENST00000339430 TCP1P17987 556 aaKnown RBP17.88■□□□□ 0.45
LITAF-201ENST00000339430 KCNA1Q09470 495 aa17.88■□□□□ 0.45
LITAF-201ENST00000339430 KLHL30Q0D2K2 578 aa17.88■□□□□ 0.45
LITAF-201ENST00000339430 CTTNQ14247 550 aaKnown RBP17.88■□□□□ 0.45
LITAF-201ENST00000339430 CCNI2Q6ZMN8 369 aaPredicted RBP17.88■□□□□ 0.45
LITAF-201ENST00000339430 PPP4R3CPQ6ZMV5 832 aa17.88■□□□□ 0.45
LITAF-201ENST00000339430 ZC3H3Q8IXZ2 948 aaKnown RBP17.88■□□□□ 0.45
LITAF-201ENST00000339430 TXLNBQ8N3L3 684 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms