RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 MICAL1Q8TDZ2 1067 aa22.14■■□□□ 1.14
RUNX3-202ENST00000338888 VAT1LQ9HCJ6 419 aa22.14■■□□□ 1.14
RUNX3-202ENST00000338888 KCNG1Q9UIX4 513 aa22.14■■□□□ 1.14
RUNX3-202ENST00000338888 NUP98P52948 1817 aa22.14■■□□□ 1.14
RUNX3-202ENST00000338888 RREB1Q92766 1687 aa22.14■■□□□ 1.13
RUNX3-202ENST00000338888 KLRF2D3W0D1 207 aa22.14■■□□□ 1.13
RUNX3-202ENST00000338888 RGS16O15492 202 aaPredicted RBP22.14■■□□□ 1.13
RUNX3-202ENST00000338888 PMS2P54278 862 aa22.14■■□□□ 1.13
RUNX3-202ENST00000338888 KCNH2Q12809 1159 aa22.14■■□□□ 1.13
RUNX3-202ENST00000338888 CAVIN4Q5BKX8 364 aa22.14■■□□□ 1.13
RUNX3-202ENST00000338888 RNF25Q96BH1 459 aaPredicted RBP22.14■■□□□ 1.13
RUNX3-202ENST00000338888 MTMR9Q96QG7 549 aa22.14■■□□□ 1.13
RUNX3-202ENST00000338888 USP21Q9UK80 565 aa22.14■■□□□ 1.13
RUNX3-202ENST00000338888 STXBP5LQ9Y2K9 1186 aa22.14■■□□□ 1.13
RUNX3-202ENST00000338888 PRPF4BQ13523 1007 aaKnown RBP22.13■■□□□ 1.13
RUNX3-202ENST00000338888 FAM26FQ5R3K3 315 aa22.13■■□□□ 1.13
RUNX3-202ENST00000338888 NT5DC3Q86UY8 548 aa22.13■■□□□ 1.13
RUNX3-202ENST00000338888 SPICE1Q8N0Z3 855 aa22.13■■□□□ 1.13
RUNX3-202ENST00000338888 SUCLA2Q9P2R7 463 aaPredicted RBP22.13■■□□□ 1.13
RUNX3-202ENST00000338888 A8MUI8 341 aa22.13■■□□□ 1.13
RUNX3-202ENST00000338888 SLC37A4O43826 429 aa22.13■■□□□ 1.13
RUNX3-202ENST00000338888 RARAP10276 462 aa22.13■■□□□ 1.13
RUNX3-202ENST00000338888 PLTPP55058 493 aa22.13■■□□□ 1.13
RUNX3-202ENST00000338888 NCALDP61601 193 aa22.13■■□□□ 1.13
RUNX3-202ENST00000338888 VPS72Q15906 364 aa22.13■■□□□ 1.13
RUNX3-202ENST00000338888 DENND2CQ68D51 928 aa22.13■■□□□ 1.13
RUNX3-202ENST00000338888 NEK9Q8TD19 979 aa22.13■■□□□ 1.13
RUNX3-202ENST00000338888 PGM2Q96G03 612 aa22.13■■□□□ 1.13
RUNX3-202ENST00000338888 CEP63Q96MT8 703 aa22.13■■□□□ 1.13
RUNX3-202ENST00000338888 PABPC3Q9H361 631 aaKnown RBP22.13■■□□□ 1.13
RUNX3-202ENST00000338888 PALM3A6NDB9 673 aaPredicted RBP22.12■■□□□ 1.13
RUNX3-202ENST00000338888 GNA11P29992 359 aa22.12■■□□□ 1.13
RUNX3-202ENST00000338888 SARNPP82979 210 aaKnown RBP22.12■■□□□ 1.13
RUNX3-202ENST00000338888 ECM1Q16610 540 aa22.12■■□□□ 1.13
RUNX3-202ENST00000338888 TMEM266Q2M3C6 531 aa22.12■■□□□ 1.13
RUNX3-202ENST00000338888 SBK1Q52WX2 424 aa22.12■■□□□ 1.13
RUNX3-202ENST00000338888 UBAP2Q5T6F2 1119 aaKnown RBP22.12■■□□□ 1.13
RUNX3-202ENST00000338888 SOGA3Q5TF21 947 aa22.12■■□□□ 1.13
RUNX3-202ENST00000338888 KRT79Q5XKE5 535 aa22.12■■□□□ 1.13
RUNX3-202ENST00000338888 CAPRIN2Q6IMN6 1127 aaKnown RBP22.12■■□□□ 1.13
RUNX3-202ENST00000338888 KIF2BQ8N4N8 673 aa22.12■■□□□ 1.13
RUNX3-202ENST00000338888 GLG1Q92896 1179 aa22.12■■□□□ 1.13
RUNX3-202ENST00000338888 DNAJC19Q96DA6 116 aa22.12■■□□□ 1.13
RUNX3-202ENST00000338888 CCDC113Q9H0I3 377 aa22.12■■□□□ 1.13
RUNX3-202ENST00000338888 RAB17Q9H0T7 212 aa22.12■■□□□ 1.13
RUNX3-202ENST00000338888 ECT2Q9H8V3 914 aa22.12■■□□□ 1.13
RUNX3-202ENST00000338888 MKNK2Q9HBH9 465 aa22.12■■□□□ 1.13
RUNX3-202ENST00000338888 A0A1B0GUL6 1792 aa22.12■■□□□ 1.13
RUNX3-202ENST00000338888 ANKRD36CQ5JPF3 1778 aa22.12■■□□□ 1.13
RUNX3-202ENST00000338888 FAM170AA1A519 330 aa22.12■■□□□ 1.13
RUNX3-202ENST00000338888 CCDC169A6NNP5 214 aa22.12■■□□□ 1.13
RUNX3-202ENST00000338888 IGF2BP3O00425 579 aaKnown RBP eCLIP22.12■■□□□ 1.13
RUNX3-202ENST00000338888 NUDT17P0C025 328 aa22.12■■□□□ 1.13
RUNX3-202ENST00000338888 PDE6BP35913 854 aa22.12■■□□□ 1.13
RUNX3-202ENST00000338888 CACNB1Q02641 598 aaPredicted RBP22.12■■□□□ 1.13
RUNX3-202ENST00000338888 BIRC2Q13490 618 aa22.12■■□□□ 1.13
RUNX3-202ENST00000338888 SLC29A2Q14542 456 aa22.12■■□□□ 1.13
RUNX3-202ENST00000338888 SLFN11Q7Z7L1 901 aa22.12■■□□□ 1.13
RUNX3-202ENST00000338888 FAM84BQ96KN1 310 aaPredicted RBP22.12■■□□□ 1.13
RUNX3-202ENST00000338888 ZDHHC18Q9NUE0 388 aa22.12■■□□□ 1.13
RUNX3-202ENST00000338888 TDP2O95551 362 aa22.11■■□□□ 1.13
RUNX3-202ENST00000338888 GNA14O95837 355 aa22.11■■□□□ 1.13
RUNX3-202ENST00000338888 ALADP13716 330 aa22.11■■□□□ 1.13
RUNX3-202ENST00000338888 SLCO1A2P46721 670 aa22.11■■□□□ 1.13
RUNX3-202ENST00000338888 ADAM9Q13443 819 aa22.11■■□□□ 1.13
RUNX3-202ENST00000338888 CDCA2Q69YH5 1023 aaPredicted RBP22.11■■□□□ 1.13
RUNX3-202ENST00000338888 STK38LQ9Y2H1 464 aa22.11■■□□□ 1.13
RUNX3-202ENST00000338888 SNX24Q9Y343 169 aa22.11■■□□□ 1.13
RUNX3-202ENST00000338888 H2AFZP0C0S5 128 aa22.11■■□□□ 1.13
RUNX3-202ENST00000338888 UCHL3P15374 230 aa22.11■■□□□ 1.13
RUNX3-202ENST00000338888 FXR2P51116 673 aaKnown RBP eCLIP22.11■■□□□ 1.13
RUNX3-202ENST00000338888 DR1Q01658 176 aa22.11■■□□□ 1.13
RUNX3-202ENST00000338888 H2AFVQ71UI9 128 aa22.11■■□□□ 1.13
RUNX3-202ENST00000338888 TMEM47Q9BQJ4 181 aa22.11■■□□□ 1.13
RUNX3-202ENST00000338888 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.11■■□□□ 1.13
RUNX3-202ENST00000338888 CCDC88AQ3V6T2 1871 aa22.11■■□□□ 1.13
RUNX3-202ENST00000338888 TSPY3P0CV98 308 aa22.1■■□□□ 1.13
RUNX3-202ENST00000338888 TSPY8P0CW00 308 aa22.1■■□□□ 1.13
RUNX3-202ENST00000338888 PRDX5P30044 214 aa22.1■■□□□ 1.13
RUNX3-202ENST00000338888 FOXR2Q6PJQ5 311 aa22.1■■□□□ 1.13
RUNX3-202ENST00000338888 ERICH1Q86X53 443 aa22.1■■□□□ 1.13
RUNX3-202ENST00000338888 RBM46Q8TBY0 533 aaKnown RBP22.1■■□□□ 1.13
RUNX3-202ENST00000338888 SAAL1Q96ER3 474 aa22.1■■□□□ 1.13
RUNX3-202ENST00000338888 HES6Q96HZ4 224 aa22.1■■□□□ 1.13
RUNX3-202ENST00000338888 ERP44Q9BS26 406 aa22.1■■□□□ 1.13
RUNX3-202ENST00000338888 DAAM1Q9Y4D1 1078 aa22.1■■□□□ 1.13
RUNX3-202ENST00000338888 ENO4A6NNW6 628 aa22.1■■□□□ 1.13
RUNX3-202ENST00000338888 SNX3O60493 162 aa22.1■■□□□ 1.13
RUNX3-202ENST00000338888 SMNDC1O75940 238 aaKnown RBP eCLIP22.1■■□□□ 1.13
RUNX3-202ENST00000338888 FLOT1O75955 427 aa22.1■■□□□ 1.13
RUNX3-202ENST00000338888 SPDYCQ5MJ68 293 aa22.1■■□□□ 1.13
RUNX3-202ENST00000338888 DUPD1Q68J44 220 aa22.1■■□□□ 1.13
RUNX3-202ENST00000338888 SMIM5Q71RC9 77 aa22.1■■□□□ 1.13
RUNX3-202ENST00000338888 REXO1Q8N1G1 1221 aaKnown RBP22.1■■□□□ 1.13
RUNX3-202ENST00000338888 FBXO25Q8TCJ0 367 aa22.1■■□□□ 1.13
RUNX3-202ENST00000338888 LRRC27Q9C0I9 530 aa22.1■■□□□ 1.13
RUNX3-202ENST00000338888 NSRP1Q9H0G5 558 aaKnown RBP22.1■■□□□ 1.13
RUNX3-202ENST00000338888 SPATS2LQ9NUQ6 558 aaKnown RBP22.1■■□□□ 1.13
RUNX3-202ENST00000338888 SLC5A4Q9NY91 659 aa22.1■■□□□ 1.13
RUNX3-202ENST00000338888 JAG2Q9Y219 1238 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms