RNA–Protein interactions for RNA: ENST00000337554.7

TSPO-202, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPO, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-202ENST00000337554 ZSCAN25Q6NSZ9 544 aa18.02■□□□□ 0.48
TSPO-202ENST00000337554 DCLRE1AQ6PJP8 1040 aa18.02■□□□□ 0.48
TSPO-202ENST00000337554 KCNT2Q6UVM3 1135 aa18.02■□□□□ 0.48
TSPO-202ENST00000337554 VSIG10LQ86VR7 867 aa18.02■□□□□ 0.48
TSPO-202ENST00000337554 ZBTB10Q96DT7 871 aa18.02■□□□□ 0.48
TSPO-202ENST00000337554 TMEM47Q9BQJ4 181 aa18.02■□□□□ 0.48
TSPO-202ENST00000337554 HELZ2Q9BYK8 2649 aaKnown RBP18.02■□□□□ 0.48
TSPO-202ENST00000337554 CPVLQ9H3G5 476 aa18.02■□□□□ 0.48
TSPO-202ENST00000337554 UNC79Q9P2D8 2635 aa18.02■□□□□ 0.48
TSPO-202ENST00000337554 MTF2Q9Y483 593 aaPredicted RBP18.02■□□□□ 0.48
TSPO-202ENST00000337554 BPTFQ12830 3046 aa18.02■□□□□ 0.48
TSPO-202ENST00000337554 IFIT2P09913 472 aaKnown RBP18.01■□□□□ 0.47
TSPO-202ENST00000337554 MYCLP12524 364 aaPredicted RBP18.01■□□□□ 0.47
TSPO-202ENST00000337554 LETM2Q2VYF4 491 aa18.01■□□□□ 0.47
TSPO-202ENST00000337554 CEP85Q6P2H3 762 aa18.01■□□□□ 0.47
TSPO-202ENST00000337554 TSSK4Q6SA08 328 aa18.01■□□□□ 0.47
TSPO-202ENST00000337554 PRR23CQ6ZRP0 262 aa18.01■□□□□ 0.47
TSPO-202ENST00000337554 CLASRPQ8N2M8 674 aaKnown RBP18.01■□□□□ 0.47
TSPO-202ENST00000337554 DDX1Q92499 740 aaKnown RBP18.01■□□□□ 0.47
TSPO-202ENST00000337554 SEMA4GQ9NTN9 838 aa18.01■□□□□ 0.47
TSPO-202ENST00000337554 C2orf16Q68DN1 1984 aa18■□□□□ 0.47
TSPO-202ENST00000337554 IGSF9BQ9UPX0 1349 aa18■□□□□ 0.47
TSPO-202ENST00000337554 PATL2C9JE40 543 aaKnown RBP18■□□□□ 0.47
TSPO-202ENST00000337554 M0R2C6 588 aa18■□□□□ 0.47
TSPO-202ENST00000337554 OPLAHO14841 1288 aa18■□□□□ 0.47
TSPO-202ENST00000337554 SNHG28P0DPA3 235 aa18■□□□□ 0.47
TSPO-202ENST00000337554 HSPD1P10809 573 aaKnown RBP18■□□□□ 0.47
TSPO-202ENST00000337554 FGFR1P11362 822 aa18■□□□□ 0.47
TSPO-202ENST00000337554 LPAL2Q16609 132 aa18■□□□□ 0.47
TSPO-202ENST00000337554 SOWAHCQ53LP3 525 aaPredicted RBP18■□□□□ 0.47
TSPO-202ENST00000337554 RSPH3Q86UC2 560 aa18■□□□□ 0.47
TSPO-202ENST00000337554 ABCB11O95342 1321 aa17.99■□□□□ 0.47
TSPO-202ENST00000337554 C9IYK1 514 aa17.99■□□□□ 0.47
TSPO-202ENST00000337554 LRP3O75074 770 aa17.99■□□□□ 0.47
TSPO-202ENST00000337554 APPP05067 770 aa17.99■□□□□ 0.47
TSPO-202ENST00000337554 PAK2Q13177 524 aa17.99■□□□□ 0.47
TSPO-202ENST00000337554 TMEM266Q2M3C6 531 aa17.99■□□□□ 0.47
TSPO-202ENST00000337554 DDX23Q9BUQ8 820 aaKnown RBP17.99■□□□□ 0.47
TSPO-202ENST00000337554 SLC2A4RGQ9NR83 387 aa17.99■□□□□ 0.47
TSPO-202ENST00000337554 EPS15L1Q9UBC2 864 aa17.99■□□□□ 0.47
TSPO-202ENST00000337554 TUBE1Q9UJT0 475 aa17.99■□□□□ 0.47
TSPO-202ENST00000337554 NOP56O00567 594 aaKnown RBP17.98■□□□□ 0.47
TSPO-202ENST00000337554 CXCL14O95715 111 aa17.98■□□□□ 0.47
TSPO-202ENST00000337554 KRT17Q04695 432 aa17.98■□□□□ 0.47
TSPO-202ENST00000337554 PTPN14Q15678 1187 aa17.98■□□□□ 0.47
TSPO-202ENST00000337554 UTP14CQ5TAP6 766 aaKnown RBP17.98■□□□□ 0.47
TSPO-202ENST00000337554 MCF2L2Q86YR7 1114 aa17.98■□□□□ 0.47
TSPO-202ENST00000337554 AUTS2Q8WXX7 1259 aa17.98■□□□□ 0.47
TSPO-202ENST00000337554 APPBP2Q92624 585 aa17.98■□□□□ 0.47
TSPO-202ENST00000337554 RNF19AQ9NV58 838 aa17.98■□□□□ 0.47
TSPO-202ENST00000337554 ZNF215Q9UL58 517 aaPredicted RBP17.98■□□□□ 0.47
TSPO-202ENST00000337554 WASF3Q9UPY6 502 aa17.98■□□□□ 0.47
TSPO-202ENST00000337554 MIA3Q5JRA6 1907 aa17.98■□□□□ 0.47
TSPO-202ENST00000337554 NAV2Q8IVL1 2488 aa17.97■□□□□ 0.47
TSPO-202ENST00000337554 IPO8O15397 1037 aaKnown RBP17.97■□□□□ 0.47
TSPO-202ENST00000337554 TOP1P11387 765 aaKnown RBP17.97■□□□□ 0.47
TSPO-202ENST00000337554 GNAT2P19087 354 aa17.97■□□□□ 0.47
TSPO-202ENST00000337554 NCLP19338 710 aaKnown RBP17.97■□□□□ 0.47
TSPO-202ENST00000337554 HSD17B4P51659 736 aa17.97■□□□□ 0.47
TSPO-202ENST00000337554 GHRHRQ02643 423 aa17.97■□□□□ 0.47
TSPO-202ENST00000337554 TMEM62Q0P6H9 643 aa17.97■□□□□ 0.47
TSPO-202ENST00000337554 SEMA3FQ13275 785 aa17.97■□□□□ 0.47
TSPO-202ENST00000337554 PGM5Q15124 567 aa17.97■□□□□ 0.47
TSPO-202ENST00000337554 GRIK4Q16099 956 aa17.97■□□□□ 0.47
TSPO-202ENST00000337554 CSRP2Q16527 193 aa17.97■□□□□ 0.47
TSPO-202ENST00000337554 LAIR1Q6GTX8 287 aa17.97■□□□□ 0.47
TSPO-202ENST00000337554 METTL7BQ6UX53 244 aa17.97■□□□□ 0.47
TSPO-202ENST00000337554 STOX1Q6ZVD7 989 aa17.97■□□□□ 0.47
TSPO-202ENST00000337554 CYFIP1Q7L576 1253 aa17.97■□□□□ 0.47
TSPO-202ENST00000337554 CABP7Q86V35 215 aa17.97■□□□□ 0.47
TSPO-202ENST00000337554 SLC39A11Q8N1S5 342 aa17.97■□□□□ 0.47
TSPO-202ENST00000337554 ZNF558Q96NG5 402 aa17.97■□□□□ 0.47
TSPO-202ENST00000337554 CASD1Q96PB1 797 aa17.97■□□□□ 0.47
TSPO-202ENST00000337554 MYADMQ96S97 322 aa17.97■□□□□ 0.47
TSPO-202ENST00000337554 BCO2Q9BYV7 579 aa17.97■□□□□ 0.47
TSPO-202ENST00000337554 SFXN1Q9H9B4 322 aa17.97■□□□□ 0.47
TSPO-202ENST00000337554 RGS18Q9NS28 235 aa17.97■□□□□ 0.47
TSPO-202ENST00000337554 SPG21Q9NZD8 308 aa17.97■□□□□ 0.47
TSPO-202ENST00000337554 TRPV2Q9Y5S1 764 aa17.97■□□□□ 0.47
TSPO-202ENST00000337554 AKAP13Q12802 2813 aa17.97■□□□□ 0.47
TSPO-202ENST00000337554 LAMA5O15230 3695 aa17.96■□□□□ 0.47
TSPO-202ENST00000337554 RETP07949 1114 aa17.96■□□□□ 0.47
TSPO-202ENST00000337554 SLC3A2P08195 630 aaKnown RBP17.96■□□□□ 0.47
TSPO-202ENST00000337554 PPM1AP35813 382 aa17.96■□□□□ 0.47
TSPO-202ENST00000337554 CTDSPL2Q05D32 466 aa17.96■□□□□ 0.47
TSPO-202ENST00000337554 PPFIA1Q13136 1202 aa17.96■□□□□ 0.47
TSPO-202ENST00000337554 WTAPQ15007 396 aa17.96■□□□□ 0.47
TSPO-202ENST00000337554 NONOQ15233 471 aaKnown RBP eCLIP17.96■□□□□ 0.47
TSPO-202ENST00000337554 CDC37Q16543 378 aaPredicted RBP17.96■□□□□ 0.47
TSPO-202ENST00000337554 UBA5Q9GZZ9 404 aa17.96■□□□□ 0.47
TSPO-202ENST00000337554 FAM49AQ9H0Q0 323 aaPredicted RBP17.96■□□□□ 0.47
TSPO-202ENST00000337554 PRMT8Q9NR22 394 aaPredicted RBP17.96■□□□□ 0.47
TSPO-202ENST00000337554 DOCK5Q9H7D0 1870 aa17.95■□□□□ 0.46
TSPO-202ENST00000337554 KAT6AQ92794 2004 aa17.95■□□□□ 0.46
TSPO-202ENST00000337554 KANSL1LA0AUZ9 987 aa17.95■□□□□ 0.46
TSPO-202ENST00000337554 TDGF1P13385 188 aa17.95■□□□□ 0.46
TSPO-202ENST00000337554 FAM189BP81408 668 aa17.95■□□□□ 0.46
TSPO-202ENST00000337554 IER5Q5VY09 327 aa17.95■□□□□ 0.46
TSPO-202ENST00000337554 SLC24A5Q71RS6 500 aa17.95■□□□□ 0.46
TSPO-202ENST00000337554 FRAT1Q92837 279 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms