RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 ZRANB2O95218 330 aaKnown RBP eCLIP25.39■■□□□ 1.66
CLPTM1-201ENST00000337392 EDRF1Q3B7T1 1238 aa25.39■■□□□ 1.66
CLPTM1-201ENST00000337392 TKFCQ3LXA3 575 aa25.39■■□□□ 1.66
CLPTM1-201ENST00000337392 IPO4Q8TEX9 1081 aaKnown RBP25.39■■□□□ 1.66
CLPTM1-201ENST00000337392 PARVGQ9HBI0 331 aa25.39■■□□□ 1.66
CLPTM1-201ENST00000337392 TUFT1Q9NNX1 390 aa25.39■■□□□ 1.66
CLPTM1-201ENST00000337392 TESPA1A2RU30 521 aaPredicted RBP25.39■■□□□ 1.65
CLPTM1-201ENST00000337392 HIP1RO75146 1068 aa25.39■■□□□ 1.65
CLPTM1-201ENST00000337392 TRIM49P0CI25 452 aa25.39■■□□□ 1.65
CLPTM1-201ENST00000337392 TRIM49CP0CI26 452 aa25.39■■□□□ 1.65
CLPTM1-201ENST00000337392 MAGEA1P43355 309 aa25.39■■□□□ 1.65
CLPTM1-201ENST00000337392 ASTE1Q2TB18 679 aaPredicted RBP25.39■■□□□ 1.65
CLPTM1-201ENST00000337392 MIER3Q7Z3K6 550 aa25.39■■□□□ 1.65
CLPTM1-201ENST00000337392 GANQ9H2C0 597 aa25.39■■□□□ 1.65
CLPTM1-201ENST00000337392 CEP72Q9P209 647 aa25.39■■□□□ 1.65
CLPTM1-201ENST00000337392 CTAGE15A4D2H0 777 aa25.38■■□□□ 1.65
CLPTM1-201ENST00000337392 WDR46O15213 610 aaKnown RBP25.38■■□□□ 1.65
CLPTM1-201ENST00000337392 CTAGE8P0CG41 777 aa25.38■■□□□ 1.65
CLPTM1-201ENST00000337392 SFMBT2Q5VUG0 894 aa25.38■■□□□ 1.65
CLPTM1-201ENST00000337392 CTAGE6Q86UF2 777 aa25.38■■□□□ 1.65
CLPTM1-201ENST00000337392 CTAGE4Q8IX94 777 aa25.38■■□□□ 1.65
CLPTM1-201ENST00000337392 MYO1AQ9UBC5 1043 aa25.38■■□□□ 1.65
CLPTM1-201ENST00000337392 SAR1BQ9Y6B6 198 aa25.38■■□□□ 1.65
CLPTM1-201ENST00000337392 ZHX2Q9Y6X8 837 aa25.38■■□□□ 1.65
CLPTM1-201ENST00000337392 A0A087X0T9 212 aa25.38■■□□□ 1.65
CLPTM1-201ENST00000337392 TBC1D8O95759 1140 aa25.38■■□□□ 1.65
CLPTM1-201ENST00000337392 FAM228BP0C875 321 aa25.38■■□□□ 1.65
CLPTM1-201ENST00000337392 XRCC5P13010 732 aaKnown RBP25.38■■□□□ 1.65
CLPTM1-201ENST00000337392 VSNL1P62760 191 aa25.38■■□□□ 1.65
CLPTM1-201ENST00000337392 B3GNT9Q6UX72 402 aa25.38■■□□□ 1.65
CLPTM1-201ENST00000337392 FAM178BQ8IXR5 827 aa25.38■■□□□ 1.65
CLPTM1-201ENST00000337392 ZC3H3Q8IXZ2 948 aaKnown RBP25.38■■□□□ 1.65
CLPTM1-201ENST00000337392 RBM46Q8TBY0 533 aaKnown RBP25.38■■□□□ 1.65
CLPTM1-201ENST00000337392 COG1Q8WTW3 980 aa25.38■■□□□ 1.65
CLPTM1-201ENST00000337392 TRERF1Q96PN7 1200 aa25.38■■□□□ 1.65
CLPTM1-201ENST00000337392 KIAA1683Q9H0B3 1180 aa25.38■■□□□ 1.65
CLPTM1-201ENST00000337392 PCIF1Q9H4Z3 704 aa25.38■■□□□ 1.65
CLPTM1-201ENST00000337392 TYW1Q9NV66 732 aaKnown RBP25.38■■□□□ 1.65
CLPTM1-201ENST00000337392 MARSP56192 900 aaKnown RBP25.37■■□□□ 1.65
CLPTM1-201ENST00000337392 SOX10P56693 466 aa25.37■■□□□ 1.65
CLPTM1-201ENST00000337392 MTMR1Q13613 665 aa25.37■■□□□ 1.65
CLPTM1-201ENST00000337392 PLA2G4FQ68DD2 849 aa25.37■■□□□ 1.65
CLPTM1-201ENST00000337392 DPY19L2P1Q6NXN4 242 aa25.37■■□□□ 1.65
CLPTM1-201ENST00000337392 NFRKBQ6P4R8 1299 aa25.37■■□□□ 1.65
CLPTM1-201ENST00000337392 CEP112Q8N8E3 955 aa25.37■■□□□ 1.65
CLPTM1-201ENST00000337392 SLC35C1Q96A29 364 aa25.37■■□□□ 1.65
CLPTM1-201ENST00000337392 GOLPH3Q9H4A6 298 aa25.37■■□□□ 1.65
CLPTM1-201ENST00000337392 PDXKO00764 312 aa25.37■■□□□ 1.65
CLPTM1-201ENST00000337392 PLA2G6O60733 806 aa25.37■■□□□ 1.65
CLPTM1-201ENST00000337392 USO1O60763 962 aaKnown RBP25.37■■□□□ 1.65
CLPTM1-201ENST00000337392 PON1P27169 355 aa25.37■■□□□ 1.65
CLPTM1-201ENST00000337392 PLA2G4AP47712 749 aa25.37■■□□□ 1.65
CLPTM1-201ENST00000337392 NAP1L1P55209 391 aaKnown RBP25.37■■□□□ 1.65
CLPTM1-201ENST00000337392 CDK17Q00537 523 aa25.37■■□□□ 1.65
CLPTM1-201ENST00000337392 PPP1R9AQ9ULJ8 1098 aa25.37■■□□□ 1.65
CLPTM1-201ENST00000337392 PACSIN2Q9UNF0 486 aaPredicted RBP25.37■■□□□ 1.65
CLPTM1-201ENST00000337392 MYH11P35749 1972 aa25.37■■□□□ 1.65
CLPTM1-201ENST00000337392 NPEPPSP55786 919 aa25.36■■□□□ 1.65
CLPTM1-201ENST00000337392 MAPK7Q13164 816 aa25.36■■□□□ 1.65
CLPTM1-201ENST00000337392 GDAP1L1Q96MZ0 367 aa25.36■■□□□ 1.65
CLPTM1-201ENST00000337392 RMDN3Q96TC7 470 aa25.36■■□□□ 1.65
CLPTM1-201ENST00000337392 ARHGEF35A5YM69 484 aa25.36■■□□□ 1.65
CLPTM1-201ENST00000337392 KIF20AO95235 890 aa25.36■■□□□ 1.65
CLPTM1-201ENST00000337392 AFPP02771 609 aaKnown RBP25.36■■□□□ 1.65
CLPTM1-201ENST00000337392 TNFAIP1Q13829 316 aa25.36■■□□□ 1.65
CLPTM1-201ENST00000337392 ZNF720Q7Z2F6 126 aa25.36■■□□□ 1.65
CLPTM1-201ENST00000337392 NACC1Q96RE7 527 aa25.36■■□□□ 1.65
CLPTM1-201ENST00000337392 ARGLU1Q9NWB6 273 aaPredicted RBP25.36■■□□□ 1.65
CLPTM1-201ENST00000337392 CALUO43852 315 aaPredicted RBP25.35■■□□□ 1.65
CLPTM1-201ENST00000337392 CTNND1O60716 968 aaKnown RBP25.35■■□□□ 1.65
CLPTM1-201ENST00000337392 GNA14O95837 355 aa25.35■■□□□ 1.65
CLPTM1-201ENST00000337392 BAATQ14032 418 aaPredicted RBP25.35■■□□□ 1.65
CLPTM1-201ENST00000337392 EPHA7Q15375 998 aa25.35■■□□□ 1.65
CLPTM1-201ENST00000337392 PADI6Q6TGC4 694 aa25.35■■□□□ 1.65
CLPTM1-201ENST00000337392 DNAH12Q6ZR08 3092 aa25.35■■□□□ 1.65
CLPTM1-201ENST00000337392 FRMPD4Q14CM0 1322 aa25.35■■□□□ 1.65
CLPTM1-201ENST00000337392 UCHL3P15374 230 aa25.35■■□□□ 1.65
CLPTM1-201ENST00000337392 C2orf54Q08AI8 447 aa25.35■■□□□ 1.65
CLPTM1-201ENST00000337392 PGM5Q15124 567 aa25.35■■□□□ 1.65
CLPTM1-201ENST00000337392 EXOC3L4Q17RC7 722 aa25.35■■□□□ 1.65
CLPTM1-201ENST00000337392 ELMO3Q96BJ8 720 aa25.35■■□□□ 1.65
CLPTM1-201ENST00000337392 KIFC3Q9BVG8 833 aa25.35■■□□□ 1.65
CLPTM1-201ENST00000337392 PLEKHA4Q9H4M7 779 aa25.35■■□□□ 1.65
CLPTM1-201ENST00000337392 AGO4Q9HCK5 861 aaKnown RBP25.35■■□□□ 1.65
CLPTM1-201ENST00000337392 ZCCHC17Q9NP64 241 aaKnown RBP25.35■■□□□ 1.65
CLPTM1-201ENST00000337392 OLFML3Q9NRN5 406 aa25.35■■□□□ 1.65
CLPTM1-201ENST00000337392 GCNT4Q9P109 453 aa25.35■■□□□ 1.65
CLPTM1-201ENST00000337392 CTDP1Q9Y5B0 961 aaPredicted RBP25.35■■□□□ 1.65
CLPTM1-201ENST00000337392 VWA5AO00534 786 aa25.34■■□□□ 1.65
CLPTM1-201ENST00000337392 MTFR1LQ9H019 292 aa25.34■■□□□ 1.65
CLPTM1-201ENST00000337392 VPS33BQ9H267 617 aa25.34■■□□□ 1.65
CLPTM1-201ENST00000337392 MATR3P43243 847 aaKnown RBP eCLIP25.34■■□□□ 1.65
CLPTM1-201ENST00000337392 SETQ01105 290 aaPredicted RBP25.34■■□□□ 1.65
CLPTM1-201ENST00000337392 PTK2Q05397 1052 aa25.34■■□□□ 1.65
CLPTM1-201ENST00000337392 KLHL30Q0D2K2 578 aa25.34■■□□□ 1.65
CLPTM1-201ENST00000337392 SLC9C1Q4G0N8 1177 aa25.34■■□□□ 1.65
CLPTM1-201ENST00000337392 PPP4R3CPQ6ZMV5 832 aa25.34■■□□□ 1.65
CLPTM1-201ENST00000337392 GSPT2Q8IYD1 628 aaKnown RBP25.34■■□□□ 1.65
CLPTM1-201ENST00000337392 KRT222Q8N1A0 295 aa25.34■■□□□ 1.65
CLPTM1-201ENST00000337392 EHMT1Q9H9B1 1298 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms