RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 CEP170P1Q96L14 293 aa17.17■□□□□ 0.34
SEC13-201ENST00000337354 JPH2Q9BR39 696 aaPredicted RBP17.17■□□□□ 0.34
SEC13-201ENST00000337354 TRPV6Q9H1D0 765 aa17.17■□□□□ 0.34
SEC13-201ENST00000337354 CYP26B1Q9NR63 512 aa17.17■□□□□ 0.34
SEC13-201ENST00000337354 TRMT13Q9NUP7 481 aaKnown RBP17.17■□□□□ 0.34
SEC13-201ENST00000337354 TUBE1Q9UJT0 475 aa17.17■□□□□ 0.34
SEC13-201ENST00000337354 ZBTB42B2RXF5 422 aa17.16■□□□□ 0.34
SEC13-201ENST00000337354 TREHO43280 583 aa17.16■□□□□ 0.34
SEC13-201ENST00000337354 CLTBP09497 229 aa17.16■□□□□ 0.34
SEC13-201ENST00000337354 KLRC1P26715 233 aa17.16■□□□□ 0.34
SEC13-201ENST00000337354 IGBP1P78318 339 aa17.16■□□□□ 0.34
SEC13-201ENST00000337354 HIC1Q14526 733 aa17.16■□□□□ 0.34
SEC13-201ENST00000337354 ECM1Q16610 540 aa17.16■□□□□ 0.34
SEC13-201ENST00000337354 MTHFD1LQ6UB35 978 aa17.16■□□□□ 0.34
SEC13-201ENST00000337354 SERINC5Q86VE9 423 aa17.16■□□□□ 0.34
SEC13-201ENST00000337354 RETREG2Q8NC44 543 aa17.16■□□□□ 0.34
SEC13-201ENST00000337354 PPP1R13LQ8WUF5 828 aa17.16■□□□□ 0.34
SEC13-201ENST00000337354 SYMPKQ92797 1274 aaKnown RBP17.16■□□□□ 0.34
SEC13-201ENST00000337354 EPSTI1Q96J88 318 aa17.16■□□□□ 0.34
SEC13-201ENST00000337354 CHAMP1Q96JM3 812 aa17.16■□□□□ 0.34
SEC13-201ENST00000337354 DDX19AQ9NUU7 478 aaKnown RBP17.16■□□□□ 0.34
SEC13-201ENST00000337354 ZMYND8Q9ULU4 1186 aaPredicted RBP17.16■□□□□ 0.34
SEC13-201ENST00000337354 PCDHA2Q9Y5H9 948 aa17.16■□□□□ 0.34
SEC13-201ENST00000337354 CEP290O15078 2479 aa17.16■□□□□ 0.34
SEC13-201ENST00000337354 SMIM35A0A1B0GVV1 85 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 RARRES1P49788 294 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 ZNF200P98182 395 aaPredicted RBP17.15■□□□□ 0.34
SEC13-201ENST00000337354 TBC1D8BQ0IIM8 1120 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 GRB10Q13322 594 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 MTERF2Q49AM1 385 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 XKR9Q5GH70 373 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 SPECC1Q5M775 1068 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 POTEGQ6S5H5 508 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 RPAINQ86UA6 219 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 NME8Q8N427 588 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 RASSF8Q8NHQ8 419 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 PIGOQ8TEQ8 1089 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 CCDC43Q96MW1 224 aaKnown RBP17.15■□□□□ 0.34
SEC13-201ENST00000337354 TMEM39AQ9NV64 488 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 FAM13BQ9NYF5 915 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 PRKAG2Q9UGJ0 569 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 DOCK5Q9H7D0 1870 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 ZBTB39O15060 712 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 GAS2O43903 313 aaKnown RBP17.15■□□□□ 0.34
SEC13-201ENST00000337354 CAND2O75155 1236 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 MAFO75444 373 aaPredicted RBP17.15■□□□□ 0.34
SEC13-201ENST00000337354 DGAT1O75907 488 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 EYA4O95677 639 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 CMA1P23946 247 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 TMOD1P28289 359 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 RFC5P40937 340 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 NPEPPSP55786 919 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 BFSP2Q13515 415 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 ZRSR1Q15695 479 aaKnown RBP17.15■□□□□ 0.34
SEC13-201ENST00000337354 TMEM119Q4V9L6 283 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 SHC4Q6S5L8 630 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 USP49Q70CQ1 688 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 RSPH3Q86UC2 560 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 ZNF710Q8N1W2 664 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 CCDC155Q8N6L0 562 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 CAGE1Q8TC20 777 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 SLC7A3Q8WY07 619 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 PNMA5Q96PV4 448 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 CTAGE1Q96RT6 745 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 CEP89Q96ST8 783 aa17.15■□□□□ 0.34
SEC13-201ENST00000337354 PYM1Q9BRP8 204 aaKnown RBP17.15■□□□□ 0.34
SEC13-201ENST00000337354 LTBP2Q14767 1821 aa17.14■□□□□ 0.33
SEC13-201ENST00000337354 IGKV6-21A0A0C4DH24 114 aa17.14■□□□□ 0.33
SEC13-201ENST00000337354 A0A1W2PQ27 194 aa17.14■□□□□ 0.33
SEC13-201ENST00000337354 A0A1W2PQ64 194 aa17.14■□□□□ 0.33
SEC13-201ENST00000337354 A0A1W2PQD8 194 aa17.14■□□□□ 0.33
SEC13-201ENST00000337354 KIAA0355O15063 1070 aa17.14■□□□□ 0.33
SEC13-201ENST00000337354 C22orf31O95567 290 aa17.14■□□□□ 0.33
SEC13-201ENST00000337354 CYP2C9P11712 490 aa17.14■□□□□ 0.33
SEC13-201ENST00000337354 SYN1P17600 705 aa17.14■□□□□ 0.33
SEC13-201ENST00000337354 DNM2P50570 870 aa17.14■□□□□ 0.33
SEC13-201ENST00000337354 RBL2Q08999 1139 aa17.14■□□□□ 0.33
SEC13-201ENST00000337354 PLA2G4FQ68DD2 849 aa17.14■□□□□ 0.33
SEC13-201ENST00000337354 CCDC73Q6ZRK6 1079 aa17.14■□□□□ 0.33
SEC13-201ENST00000337354 CLEC17AQ6ZS10 378 aa17.14■□□□□ 0.33
SEC13-201ENST00000337354 TRAPPC12Q8WVT3 735 aa17.14■□□□□ 0.33
SEC13-201ENST00000337354 DHX33Q9H6R0 707 aaKnown RBP17.14■□□□□ 0.33
SEC13-201ENST00000337354 TBX21Q9UL17 535 aa17.14■□□□□ 0.33
SEC13-201ENST00000337354 SCN10AQ9Y5Y9 1956 aa17.13■□□□□ 0.33
SEC13-201ENST00000337354 ARHGEF35A5YM69 484 aa17.13■□□□□ 0.33
SEC13-201ENST00000337354 TMEM150BA6NC51 233 aa17.13■□□□□ 0.33
SEC13-201ENST00000337354 GOLGA6L4A6NEF3 574 aa17.13■□□□□ 0.33
SEC13-201ENST00000337354 E9PMD0 336 aa17.13■□□□□ 0.33
SEC13-201ENST00000337354 PITPNM1O00562 1244 aa17.13■□□□□ 0.33
SEC13-201ENST00000337354 POLGP54098 1239 aaPredicted RBP17.13■□□□□ 0.33
SEC13-201ENST00000337354 CDC42EP1Q00587 391 aa17.13■□□□□ 0.33
SEC13-201ENST00000337354 KARSQ15046 597 aaKnown RBP17.13■□□□□ 0.33
SEC13-201ENST00000337354 RRAGBQ5VZM2 374 aa17.13■□□□□ 0.33
SEC13-201ENST00000337354 RESP18Q5W5W9 173 aa17.13■□□□□ 0.33
SEC13-201ENST00000337354 EFCAB12Q6NXP0 572 aa17.13■□□□□ 0.33
SEC13-201ENST00000337354 SYT2Q8N9I0 419 aaPredicted RBP17.13■□□□□ 0.33
SEC13-201ENST00000337354 BHMT2Q9H2M3 363 aa17.13■□□□□ 0.33
SEC13-201ENST00000337354 GDPD2Q9HCC8 539 aa17.13■□□□□ 0.33
SEC13-201ENST00000337354 PDLIM7Q9NR12 457 aa17.13■□□□□ 0.33
SEC13-201ENST00000337354 STK17AQ9UEE5 414 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms