RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 CEP170P1Q96L14 293 aa15.73■□□□□ 0.11
APOBEC3B-202ENST00000335760 CCDC43Q96MW1 224 aaKnown RBP15.73■□□□□ 0.11
APOBEC3B-202ENST00000335760 PANK2Q9BZ23 570 aa15.73■□□□□ 0.11
APOBEC3B-202ENST00000335760 ANKEF1Q9NU02 776 aa15.73■□□□□ 0.11
APOBEC3B-202ENST00000335760 DNM3Q9UQ16 869 aa15.73■□□□□ 0.11
APOBEC3B-202ENST00000335760 ATP11BQ9Y2G3 1177 aa15.73■□□□□ 0.11
APOBEC3B-202ENST00000335760 COL1A2P08123 1366 aa15.73■□□□□ 0.11
APOBEC3B-202ENST00000335760 KAT6AQ92794 2004 aa15.72■□□□□ 0.11
APOBEC3B-202ENST00000335760 MROH7Q68CQ1 1323 aa15.72■□□□□ 0.11
APOBEC3B-202ENST00000335760 E9PMD0 336 aa15.72■□□□□ 0.11
APOBEC3B-202ENST00000335760 PQBP1O60828 265 aaKnown RBP15.72■□□□□ 0.11
APOBEC3B-202ENST00000335760 PLCG1P19174 1290 aa15.72■□□□□ 0.11
APOBEC3B-202ENST00000335760 CMA1P23946 247 aa15.72■□□□□ 0.11
APOBEC3B-202ENST00000335760 HOXC8P31273 242 aa15.72■□□□□ 0.11
APOBEC3B-202ENST00000335760 TARBP2Q15633 366 aaKnown RBP15.72■□□□□ 0.11
APOBEC3B-202ENST00000335760 PTGISQ16647 500 aa15.72■□□□□ 0.11
APOBEC3B-202ENST00000335760 MARCH8Q5T0T0 291 aa15.72■□□□□ 0.11
APOBEC3B-202ENST00000335760 CLEC17AQ6ZS10 378 aa15.72■□□□□ 0.11
APOBEC3B-202ENST00000335760 KCNK18Q7Z418 384 aa15.72■□□□□ 0.11
APOBEC3B-202ENST00000335760 ZBTB10Q96DT7 871 aa15.72■□□□□ 0.11
APOBEC3B-202ENST00000335760 GBP4Q96PP9 640 aa15.72■□□□□ 0.11
APOBEC3B-202ENST00000335760 TRPV6Q9H1D0 765 aa15.72■□□□□ 0.11
APOBEC3B-202ENST00000335760 CYP26B1Q9NR63 512 aa15.72■□□□□ 0.11
APOBEC3B-202ENST00000335760 TRMT13Q9NUP7 481 aaKnown RBP15.72■□□□□ 0.11
APOBEC3B-202ENST00000335760 DBR1Q9UK59 544 aaKnown RBP15.72■□□□□ 0.11
APOBEC3B-202ENST00000335760 NOD1Q9Y239 953 aa15.72■□□□□ 0.11
APOBEC3B-202ENST00000335760 A0A1W2PQ27 194 aa15.71■□□□□ 0.11
APOBEC3B-202ENST00000335760 A0A1W2PQ64 194 aa15.71■□□□□ 0.11
APOBEC3B-202ENST00000335760 A0A1W2PQD8 194 aa15.71■□□□□ 0.11
APOBEC3B-202ENST00000335760 TLR3O15455 904 aaKnown RBP15.71■□□□□ 0.11
APOBEC3B-202ENST00000335760 TREHO43280 583 aa15.71■□□□□ 0.11
APOBEC3B-202ENST00000335760 B4GALT4O60513 344 aa15.71■□□□□ 0.11
APOBEC3B-202ENST00000335760 EYA4O95677 639 aa15.71■□□□□ 0.11
APOBEC3B-202ENST00000335760 KLRC1P26715 233 aa15.71■□□□□ 0.11
APOBEC3B-202ENST00000335760 RARRES1P49788 294 aa15.71■□□□□ 0.11
APOBEC3B-202ENST00000335760 ADAM17P78536 824 aa15.71■□□□□ 0.11
APOBEC3B-202ENST00000335760 TLE2Q04725 743 aa15.71■□□□□ 0.11
APOBEC3B-202ENST00000335760 RRAGBQ5VZM2 374 aa15.71■□□□□ 0.11
APOBEC3B-202ENST00000335760 MTHFD1LQ6UB35 978 aa15.71■□□□□ 0.11
APOBEC3B-202ENST00000335760 CCDC73Q6ZRK6 1079 aa15.71■□□□□ 0.11
APOBEC3B-202ENST00000335760 ANKRD33Q7Z3H0 272 aa15.71■□□□□ 0.11
APOBEC3B-202ENST00000335760 FAM126BQ8IXS8 530 aa15.71■□□□□ 0.11
APOBEC3B-202ENST00000335760 KCTD17Q8N5Z5 321 aa15.71■□□□□ 0.11
APOBEC3B-202ENST00000335760 PDILTQ8N807 584 aa15.71■□□□□ 0.11
APOBEC3B-202ENST00000335760 TMEM87AQ8NBN3 555 aa15.71■□□□□ 0.11
APOBEC3B-202ENST00000335760 BHMT2Q9H2M3 363 aa15.71■□□□□ 0.11
APOBEC3B-202ENST00000335760 TUBE1Q9UJT0 475 aa15.71■□□□□ 0.11
APOBEC3B-202ENST00000335760 A0A087X0B3 334 aa15.7■□□□□ 0.1
APOBEC3B-202ENST00000335760 A0A1B0GVL5 298 aa15.7■□□□□ 0.1
APOBEC3B-202ENST00000335760 ARHGEF35A5YM69 484 aa15.7■□□□□ 0.1
APOBEC3B-202ENST00000335760 DCDC2CA8MYV0 355 aa15.7■□□□□ 0.1
APOBEC3B-202ENST00000335760 CAPN15O75808 1086 aa15.7■□□□□ 0.1
APOBEC3B-202ENST00000335760 C22orf31O95567 290 aa15.7■□□□□ 0.1
APOBEC3B-202ENST00000335760 CD4P01730 458 aa15.7■□□□□ 0.1
APOBEC3B-202ENST00000335760 PFKFB1P16118 471 aa15.7■□□□□ 0.1
APOBEC3B-202ENST00000335760 STAT6P42226 847 aa15.7■□□□□ 0.1
APOBEC3B-202ENST00000335760 TBC1D8BQ0IIM8 1120 aa15.7■□□□□ 0.1
APOBEC3B-202ENST00000335760 FSIP1Q8NA03 581 aa15.7■□□□□ 0.1
APOBEC3B-202ENST00000335760 LRRC15Q8TF66 581 aa15.7■□□□□ 0.1
APOBEC3B-202ENST00000335760 MRPS27Q92552 414 aaKnown RBP15.7■□□□□ 0.1
APOBEC3B-202ENST00000335760 TOX2Q96NM4 488 aa15.7■□□□□ 0.1
APOBEC3B-202ENST00000335760 CEP89Q96ST8 783 aa15.7■□□□□ 0.1
APOBEC3B-202ENST00000335760 HTATIP2Q9BUP3 242 aa15.7■□□□□ 0.1
APOBEC3B-202ENST00000335760 KCNH3Q9ULD8 1083 aa15.7■□□□□ 0.1
APOBEC3B-202ENST00000335760 ARID2Q68CP9 1835 aa15.7■□□□□ 0.1
APOBEC3B-202ENST00000335760 TRIP12Q14669 1992 aaPredicted RBP15.7■□□□□ 0.1
APOBEC3B-202ENST00000335760 MBLAC1A4D2B0 266 aaPredicted RBP15.69■□□□□ 0.1
APOBEC3B-202ENST00000335760 MAGEB2O15479 319 aa15.69■□□□□ 0.1
APOBEC3B-202ENST00000335760 POLR2DO15514 142 aaKnown RBP15.69■□□□□ 0.1
APOBEC3B-202ENST00000335760 GADD45BO75293 160 aaPredicted RBP15.69■□□□□ 0.1
APOBEC3B-202ENST00000335760 PRPF40AO75400 957 aaKnown RBP15.69■□□□□ 0.1
APOBEC3B-202ENST00000335760 SSBP05455 408 aaKnown RBP eCLIP15.69■□□□□ 0.1
APOBEC3B-202ENST00000335760 PLA2G4BP0C869 781 aa15.69■□□□□ 0.1
APOBEC3B-202ENST00000335760 CYP2C9P11712 490 aa15.69■□□□□ 0.1
APOBEC3B-202ENST00000335760 POLGP54098 1239 aaPredicted RBP15.69■□□□□ 0.1
APOBEC3B-202ENST00000335760 RUFY4Q6ZNE9 571 aa15.69■□□□□ 0.1
APOBEC3B-202ENST00000335760 RAD54LQ92698 747 aa15.69■□□□□ 0.1
APOBEC3B-202ENST00000335760 DHX58Q96C10 678 aa15.69■□□□□ 0.1
APOBEC3B-202ENST00000335760 CTAGE1Q96RT6 745 aa15.69■□□□□ 0.1
APOBEC3B-202ENST00000335760 BMP2KQ9NSY1 1161 aaPredicted RBP15.69■□□□□ 0.1
APOBEC3B-202ENST00000335760 BLOC1S4Q9NUP1 217 aa15.69■□□□□ 0.1
APOBEC3B-202ENST00000335760 PPME1Q9Y570 386 aa15.69■□□□□ 0.1
APOBEC3B-202ENST00000335760 PCDHA2Q9Y5H9 948 aa15.69■□□□□ 0.1
APOBEC3B-202ENST00000335760 LOXHD1Q8IVV2 1947 aa15.69■□□□□ 0.1
APOBEC3B-202ENST00000335760 DNAH12Q6ZR08 3092 aa15.68■□□□□ 0.1
APOBEC3B-202ENST00000335760 MAFO75444 373 aaPredicted RBP15.68■□□□□ 0.1
APOBEC3B-202ENST00000335760 RFC5P40937 340 aa15.68■□□□□ 0.1
APOBEC3B-202ENST00000335760 NDUFA8P51970 172 aa15.68■□□□□ 0.1
APOBEC3B-202ENST00000335760 FAAP100Q0VG06 881 aa15.68■□□□□ 0.1
APOBEC3B-202ENST00000335760 PTK7Q13308 1070 aa15.68■□□□□ 0.1
APOBEC3B-202ENST00000335760 DHX8Q14562 1220 aaKnown RBP15.68■□□□□ 0.1
APOBEC3B-202ENST00000335760 MCM6Q14566 821 aa15.68■□□□□ 0.1
APOBEC3B-202ENST00000335760 NAALADL2Q58DX5 795 aa15.68■□□□□ 0.1
APOBEC3B-202ENST00000335760 PADI6Q6TGC4 694 aa15.68■□□□□ 0.1
APOBEC3B-202ENST00000335760 SERINC5Q86VE9 423 aa15.68■□□□□ 0.1
APOBEC3B-202ENST00000335760 METTL13Q8N6R0 699 aa15.68■□□□□ 0.1
APOBEC3B-202ENST00000335760 RETREG2Q8NC44 543 aa15.68■□□□□ 0.1
APOBEC3B-202ENST00000335760 SLC7A3Q8WY07 619 aa15.68■□□□□ 0.1
APOBEC3B-202ENST00000335760 GOLPH3LQ9H4A5 285 aa15.68■□□□□ 0.1
APOBEC3B-202ENST00000335760 DHX33Q9H6R0 707 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms