RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 CTTNQ14247 550 aaKnown RBP15.19■□□□□ 0.02
SF1-202ENST00000334944 FAM83BQ5T0W9 1011 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 SFR1Q86XK3 245 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 KSR1Q8IVT5 923 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 CCDC65Q8IXS2 484 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 ETNPPLQ8TBG4 499 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 MKL1Q969V6 931 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 LENG9Q96B70 501 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 TUBB2BQ9BVA1 445 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 VCPKMTQ9H867 229 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.19■□□□□ 0.02
SF1-202ENST00000334944 MYO1AQ9UBC5 1043 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 PRR12Q9ULL5 1215 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 NRXN2Q9P2S2 1712 aa15.19■□□□□ 0.02
SF1-202ENST00000334944 MSH4O15457 936 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 MYBP10242 640 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 HPDP32754 393 aaPredicted RBP15.18■□□□□ 0.02
SF1-202ENST00000334944 SPIRE1Q08AE8 756 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 NNTQ13423 1086 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 ADAM9Q13443 819 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 SNCBQ16143 134 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 ZCWPW2Q504Y3 356 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 PARD3BQ8TEW8 1205 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 BAP1Q92560 729 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 ZBTB10Q96DT7 871 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 REEP2Q9BRK0 252 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 GLIS2Q9BZE0 524 aaPredicted RBP15.18■□□□□ 0.02
SF1-202ENST00000334944 NT5C3AQ9H0P0 336 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 E7EVH7 732 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 SPATA31C1P0DKV0 1188 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 VAV2P52735 878 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 SNX1Q13596 522 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 PARP9Q8IXQ6 854 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 THOC1Q96FV9 657 aaKnown RBP15.18■□□□□ 0.02
SF1-202ENST00000334944 FBXO28Q9NVF7 368 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 PCDHA2Q9Y5H9 948 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 ARFGEF1Q9Y6D6 1849 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 CLIC2O15247 247 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 PPP1R2P41236 205 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 SMTNP53814 917 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 SLC12A3P55017 1021 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 TUBB4BP68371 445 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 CYB5D1Q6P9G0 228 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 FMNL3Q8IVF7 1028 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 CEP120Q8N960 986 aa15.18■□□□□ 0.02
SF1-202ENST00000334944 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.18■□□□□ 0.02
SF1-202ENST00000334944 SIPA1L1O43166 1804 aa15.17■□□□□ 0.02
SF1-202ENST00000334944 RTN2O75298 545 aa15.17■□□□□ 0.02
SF1-202ENST00000334944 MYBL1P10243 752 aa15.17■□□□□ 0.02
SF1-202ENST00000334944 NR2F2P24468 414 aa15.17■□□□□ 0.02
SF1-202ENST00000334944 USP11P51784 963 aa15.17■□□□□ 0.02
SF1-202ENST00000334944 RAPGEF1Q13905 1077 aa15.17■□□□□ 0.02
SF1-202ENST00000334944 WLSQ5T9L3 541 aa15.17■□□□□ 0.02
SF1-202ENST00000334944 NFRKBQ6P4R8 1299 aa15.17■□□□□ 0.02
SF1-202ENST00000334944 CCDC170Q8IYT3 715 aa15.17■□□□□ 0.02
SF1-202ENST00000334944 SPDL1Q96EA4 605 aa15.17■□□□□ 0.02
SF1-202ENST00000334944 CCT8L2Q96SF2 557 aa15.17■□□□□ 0.02
SF1-202ENST00000334944 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.17■□□□□ 0.026e-6■■□□□ 11.9
SF1-202ENST00000334944 RUSC1Q9BVN2 902 aa15.17■□□□□ 0.02
SF1-202ENST00000334944 ZNF277Q9NRM2 450 aaPredicted RBP15.17■□□□□ 0.02
SF1-202ENST00000334944 FAM184BQ9ULE4 1060 aa15.17■□□□□ 0.02
SF1-202ENST00000334944 A0A1B0GUA9 196 aa15.17■□□□□ 0.02
SF1-202ENST00000334944 TLR2O60603 784 aa15.17■□□□□ 0.02
SF1-202ENST00000334944 NOL4O94818 638 aa15.17■□□□□ 0.02
SF1-202ENST00000334944 FGFR1OPO95684 399 aaKnown RBP15.17■□□□□ 0.02
SF1-202ENST00000334944 CRYMQ14894 314 aa15.17■□□□□ 0.02
SF1-202ENST00000334944 DCAF17Q5H9S7 520 aaPredicted RBP15.17■□□□□ 0.02
SF1-202ENST00000334944 ZNF483Q8TF39 744 aaPredicted RBP15.17■□□□□ 0.02
SF1-202ENST00000334944 AENQ8WTP8 325 aaKnown RBP15.17■□□□□ 0.02
SF1-202ENST00000334944 ZIM3Q96PE6 472 aa15.17■□□□□ 0.02
SF1-202ENST00000334944 SERPINA10Q9UK55 444 aa15.17■□□□□ 0.02
SF1-202ENST00000334944 KDM3AQ9Y4C1 1321 aa15.17■□□□□ 0.02
SF1-202ENST00000334944 ESYT3A0FGR9 886 aa15.16■□□□□ 0.02
SF1-202ENST00000334944 DNM1LO00429 736 aa15.16■□□□□ 0.02
SF1-202ENST00000334944 PLSCR1O15162 318 aa15.16■□□□□ 0.02
SF1-202ENST00000334944 EZRP15311 586 aaKnown RBP15.16■□□□□ 0.02
SF1-202ENST00000334944 EPS15P42566 896 aa15.16■□□□□ 0.02
SF1-202ENST00000334944 MAGEA1P43355 309 aa15.16■□□□□ 0.02
SF1-202ENST00000334944 PSMD2Q13200 908 aa15.16■□□□□ 0.02
SF1-202ENST00000334944 COBLL1Q53SF7 1204 aa15.16■□□□□ 0.02
SF1-202ENST00000334944 TCERG1LQ5VWI1 586 aa15.16■□□□□ 0.02
SF1-202ENST00000334944 TPH2Q8IWU9 490 aa15.16■□□□□ 0.02
SF1-202ENST00000334944 TMEM39BQ9GZU3 492 aa15.16■□□□□ 0.02
SF1-202ENST00000334944 DNM3Q9UQ16 869 aa15.16■□□□□ 0.02
SF1-202ENST00000334944 A0A1W2PQJ5 194 aa15.16■□□□□ 0.02
SF1-202ENST00000334944 RNASE9P60153 205 aaKnown RBP15.16■□□□□ 0.02
SF1-202ENST00000334944 GIT2Q14161 759 aa15.16■□□□□ 0.02
SF1-202ENST00000334944 PDXDC1Q6P996 788 aa15.16■□□□□ 0.02
SF1-202ENST00000334944 FAM133AQ8N9E0 248 aa15.16■□□□□ 0.02
SF1-202ENST00000334944 LRRC27Q9C0I9 530 aa15.16■□□□□ 0.02
SF1-202ENST00000334944 KCTD10Q9H3F6 313 aa15.16■□□□□ 0.02
SF1-202ENST00000334944 GOLGA8KD6RF30 607 aa15.15■□□□□ 0.02
SF1-202ENST00000334944 DDX39AO00148 427 aaKnown RBP15.15■□□□□ 0.02
SF1-202ENST00000334944 HOXD13P35453 343 aa15.15■□□□□ 0.02
SF1-202ENST00000334944 EN1Q05925 392 aaPredicted RBP15.15■□□□□ 0.02
SF1-202ENST00000334944 DGKZQ13574 1117 aa15.15■□□□□ 0.02
SF1-202ENST00000334944 CC2D2BQ6DHV5 1058 aa15.15■□□□□ 0.02
SF1-202ENST00000334944 FUKQ8N0W3 1084 aa15.15■□□□□ 0.02
SF1-202ENST00000334944 BCS1LQ9Y276 419 aa15.15■□□□□ 0.02
SF1-202ENST00000334944 GOLGA6L7A0A1B0GV03 622 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms