RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 SLC35C1Q96A29 364 aa19.4■□□□□ 0.7
LRCH3-201ENST00000334859 IKZF4Q9H2S9 585 aa19.4■□□□□ 0.7
LRCH3-201ENST00000334859 TUFT1Q9NNX1 390 aa19.4■□□□□ 0.7
LRCH3-201ENST00000334859 ZBTB39O15060 712 aa19.39■□□□□ 0.69
LRCH3-201ENST00000334859 PSMD10O75832 226 aa19.39■□□□□ 0.69
LRCH3-201ENST00000334859 POLD1P28340 1107 aa19.39■□□□□ 0.69
LRCH3-201ENST00000334859 GGCXP38435 758 aa19.39■□□□□ 0.69
LRCH3-201ENST00000334859 IRF2BP2Q7Z5L9 587 aa19.39■□□□□ 0.69
LRCH3-201ENST00000334859 ZC3H4Q9UPT8 1303 aaKnown RBP19.39■□□□□ 0.69
LRCH3-201ENST00000334859 GOLGA6BA6NDN3 693 aa19.39■□□□□ 0.69
LRCH3-201ENST00000334859 SLITRK3O94933 977 aa19.39■□□□□ 0.69
LRCH3-201ENST00000334859 ZC2HC1CQ53FD0 456 aaPredicted RBP19.39■□□□□ 0.69
LRCH3-201ENST00000334859 PARVGQ9HBI0 331 aa19.39■□□□□ 0.69
LRCH3-201ENST00000334859 VEZTQ9HBM0 779 aa19.39■□□□□ 0.69
LRCH3-201ENST00000334859 ZMYM2Q9UBW7 1377 aa19.38■□□□□ 0.69
LRCH3-201ENST00000334859 GRID2IPA4D2P6 1211 aa19.38■□□□□ 0.69
LRCH3-201ENST00000334859 RAD17O75943 681 aa19.38■□□□□ 0.69
LRCH3-201ENST00000334859 PRELPP51888 382 aa19.38■□□□□ 0.69
LRCH3-201ENST00000334859 PPP2R5CQ13362 524 aa19.38■□□□□ 0.69
LRCH3-201ENST00000334859 DLGAP5Q15398 846 aa19.38■□□□□ 0.69
LRCH3-201ENST00000334859 DPY19L2P1Q6NXN4 242 aa19.38■□□□□ 0.69
LRCH3-201ENST00000334859 LEKR1Q6ZMV7 388 aa19.38■□□□□ 0.69
LRCH3-201ENST00000334859 RBM46Q8TBY0 533 aaKnown RBP19.38■□□□□ 0.69
LRCH3-201ENST00000334859 SLC5A5Q92911 643 aa19.38■□□□□ 0.69
LRCH3-201ENST00000334859 EHMT1Q9H9B1 1298 aa19.38■□□□□ 0.69
LRCH3-201ENST00000334859 BZW2Q9Y6E2 419 aaKnown RBP19.38■□□□□ 0.69
LRCH3-201ENST00000334859 EIF3DO15371 548 aaKnown RBP eCLIP19.37■□□□□ 0.69
LRCH3-201ENST00000334859 TGFB1I1O43294 461 aa19.37■□□□□ 0.69
LRCH3-201ENST00000334859 PPP1R12BO60237 982 aaPredicted RBP19.37■□□□□ 0.69
LRCH3-201ENST00000334859 CEP55Q53EZ4 464 aa19.37■□□□□ 0.69
LRCH3-201ENST00000334859 MEI1Q5TIA1 1274 aa19.37■□□□□ 0.69
LRCH3-201ENST00000334859 C1orf186Q6ZWK4 172 aa19.37■□□□□ 0.69
LRCH3-201ENST00000334859 FAM186BQ8IYM0 893 aa19.37■□□□□ 0.69
LRCH3-201ENST00000334859 CHURC1Q8WUH1 139 aa19.37■□□□□ 0.69
LRCH3-201ENST00000334859 RNF14Q9UBS8 474 aa19.37■□□□□ 0.69
LRCH3-201ENST00000334859 ZNF70Q9UC06 446 aaPredicted RBP19.37■□□□□ 0.69
LRCH3-201ENST00000334859 GJB7Q6PEY0 223 aa19.37■□□□□ 0.69
LRCH3-201ENST00000334859 KSR1Q8IVT5 923 aa19.37■□□□□ 0.69
LRCH3-201ENST00000334859 KCTD17Q8N5Z5 321 aa19.37■□□□□ 0.69
LRCH3-201ENST00000334859 ZNF577Q9BSK1 485 aa19.37■□□□□ 0.69
LRCH3-201ENST00000334859 RANBP17Q9H2T7 1088 aaKnown RBP19.37■□□□□ 0.69
LRCH3-201ENST00000334859 AJAP1Q9UKB5 411 aaPredicted RBP19.37■□□□□ 0.69
LRCH3-201ENST00000334859 MRPL11Q9Y3B7 192 aaKnown RBP19.37■□□□□ 0.69
LRCH3-201ENST00000334859 SHTN1A0MZ66 631 aa19.36■□□□□ 0.69
LRCH3-201ENST00000334859 ACTN2P35609 894 aa19.36■□□□□ 0.69
LRCH3-201ENST00000334859 NOP2P46087 812 aaKnown RBP19.36■□□□□ 0.69
LRCH3-201ENST00000334859 C10orf76Q5T2E6 689 aa19.36■□□□□ 0.69
LRCH3-201ENST00000334859 RSBN1LQ6PCB5 846 aaPredicted RBP19.36■□□□□ 0.69
LRCH3-201ENST00000334859 DNAAF5Q86Y56 855 aa19.36■□□□□ 0.69
LRCH3-201ENST00000334859 AFAP1L1Q8TED9 768 aa19.36■□□□□ 0.69
LRCH3-201ENST00000334859 FAM151AQ8WW52 585 aa19.36■□□□□ 0.69
LRCH3-201ENST00000334859 NAGPAQ9UK23 515 aa19.36■□□□□ 0.69
LRCH3-201ENST00000334859 FRMPD4Q14CM0 1322 aa19.36■□□□□ 0.69
LRCH3-201ENST00000334859 FLOT1O75955 427 aa19.36■□□□□ 0.69
LRCH3-201ENST00000334859 PSMC2P35998 433 aaKnown RBP19.36■□□□□ 0.69
LRCH3-201ENST00000334859 EPHB4P54760 987 aa19.36■□□□□ 0.69
LRCH3-201ENST00000334859 RNASE9P60153 205 aaKnown RBP19.36■□□□□ 0.69
LRCH3-201ENST00000334859 ALKBH5Q6P6C2 394 aaKnown RBP19.36■□□□□ 0.69
LRCH3-201ENST00000334859 VPS36Q86VN1 386 aa19.36■□□□□ 0.69
LRCH3-201ENST00000334859 CDAN1Q8IWY9 1227 aa19.36■□□□□ 0.69
LRCH3-201ENST00000334859 FAM178BQ8IXR5 827 aa19.36■□□□□ 0.69
LRCH3-201ENST00000334859 OGFOD1Q8N543 542 aa19.36■□□□□ 0.69
LRCH3-201ENST00000334859 GOLGA5Q8TBA6 731 aa19.36■□□□□ 0.69
LRCH3-201ENST00000334859 TAF4BQ92750 862 aa19.36■□□□□ 0.69
LRCH3-201ENST00000334859 VCPKMTQ9H867 229 aa19.36■□□□□ 0.69
LRCH3-201ENST00000334859 SIX2Q9NPC8 291 aa19.36■□□□□ 0.69
LRCH3-201ENST00000334859 FBXO28Q9NVF7 368 aa19.36■□□□□ 0.69
LRCH3-201ENST00000334859 COG2Q14746 738 aa19.35■□□□□ 0.69
LRCH3-201ENST00000334859 MIGA2Q7L4E1 593 aa19.35■□□□□ 0.69
LRCH3-201ENST00000334859 HS2ST1Q7LGA3 356 aa19.35■□□□□ 0.69
LRCH3-201ENST00000334859 WDR11Q9BZH6 1224 aa19.35■□□□□ 0.69
LRCH3-201ENST00000334859 UNC45AQ9H3U1 944 aa19.35■□□□□ 0.69
LRCH3-201ENST00000334859 GOLPH3Q9H4A6 298 aa19.35■□□□□ 0.69
LRCH3-201ENST00000334859 PLEKHA4Q9H4M7 779 aa19.35■□□□□ 0.69
LRCH3-201ENST00000334859 RBBP6Q7Z6E9 1792 aaKnown RBP19.35■□□□□ 0.69
LRCH3-201ENST00000334859 VIL1P09327 827 aaKnown RBP19.35■□□□□ 0.69
LRCH3-201ENST00000334859 ARP10275 920 aa19.35■□□□□ 0.69
LRCH3-201ENST00000334859 CYP2J2P51589 502 aa19.35■□□□□ 0.69
LRCH3-201ENST00000334859 SLC15A2Q16348 729 aa19.35■□□□□ 0.69
LRCH3-201ENST00000334859 GLE1Q53GS7 698 aaKnown RBP19.35■□□□□ 0.69
LRCH3-201ENST00000334859 MUM1L1Q5H9M0 696 aa19.35■□□□□ 0.69
LRCH3-201ENST00000334859 INPP4AQ96PE3 977 aaPredicted RBP19.35■□□□□ 0.69
LRCH3-201ENST00000334859 NACC1Q96RE7 527 aa19.35■□□□□ 0.69
LRCH3-201ENST00000334859 TMEM39BQ9GZU3 492 aa19.35■□□□□ 0.69
LRCH3-201ENST00000334859 WRAP73Q9P2S5 460 aaPredicted RBP19.35■□□□□ 0.69
LRCH3-201ENST00000334859 CNTNAP1P78357 1384 aa19.34■□□□□ 0.69
LRCH3-201ENST00000334859 AGPSO00116 658 aa19.34■□□□□ 0.69
LRCH3-201ENST00000334859 DDX39AO00148 427 aaKnown RBP19.34■□□□□ 0.69
LRCH3-201ENST00000334859 PRKCIP41743 596 aa19.34■□□□□ 0.69
LRCH3-201ENST00000334859 JAM2P57087 298 aa19.34■□□□□ 0.69
LRCH3-201ENST00000334859 PTPROQ16827 1216 aa19.34■□□□□ 0.69
LRCH3-201ENST00000334859 ODR4Q5SWX8 454 aa19.34■□□□□ 0.69
LRCH3-201ENST00000334859 EMBQ6PCB8 327 aa19.34■□□□□ 0.69
LRCH3-201ENST00000334859 TEX2Q8IWB9 1127 aa19.34■□□□□ 0.69
LRCH3-201ENST00000334859 LXNQ9BS40 222 aa19.34■□□□□ 0.69
LRCH3-201ENST00000334859 PKD2L1Q9P0L9 805 aa19.34■□□□□ 0.69
LRCH3-201ENST00000334859 ZBTB12Q9Y330 459 aaPredicted RBP19.34■□□□□ 0.69
LRCH3-201ENST00000334859 BTNL10A8MVZ5 291 aa19.34■□□□□ 0.69
LRCH3-201ENST00000334859 KCNK3O14649 394 aa19.34■□□□□ 0.69
LRCH3-201ENST00000334859 GFPT2O94808 682 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms