RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 KIRREL3Q8IZU9 778 aa15.72■□□□□ 0.11
SNX20-202ENST00000330943 ANKS4BQ8N8V4 417 aa15.72■□□□□ 0.11
SNX20-202ENST00000330943 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.72■□□□□ 0.11
SNX20-202ENST00000330943 NR2E1Q9Y466 385 aa15.72■□□□□ 0.11
SNX20-202ENST00000330943 FAM170AA1A519 330 aa15.71■□□□□ 0.11
SNX20-202ENST00000330943 UBAP1LF5GYI3 381 aa15.71■□□□□ 0.11
SNX20-202ENST00000330943 COPB2P35606 906 aa15.71■□□□□ 0.11
SNX20-202ENST00000330943 EXOC3L4Q17RC7 722 aa15.71■□□□□ 0.11
SNX20-202ENST00000330943 NBPF9Q3BBW0 867 aa15.71■□□□□ 0.11
SNX20-202ENST00000330943 NT5DC3Q86UY8 548 aa15.71■□□□□ 0.11
SNX20-202ENST00000330943 TAX1BP1Q86VP1 789 aa15.71■□□□□ 0.11
SNX20-202ENST00000330943 ATP8B4Q8TF62 1192 aa15.71■□□□□ 0.11
SNX20-202ENST00000330943 TCP11Q8WWU5 503 aa15.71■□□□□ 0.11
SNX20-202ENST00000330943 SEC14L1Q92503 715 aa15.71■□□□□ 0.11
SNX20-202ENST00000330943 KIAA1024Q9UPX6 916 aa15.71■□□□□ 0.11
SNX20-202ENST00000330943 STXBP5LQ9Y2K9 1186 aa15.71■□□□□ 0.11
SNX20-202ENST00000330943 PCDHA2Q9Y5H9 948 aa15.71■□□□□ 0.11
SNX20-202ENST00000330943 PPFIA2O75334 1257 aa15.71■□□□□ 0.11
SNX20-202ENST00000330943 KRT18P05783 430 aaKnown RBP15.71■□□□□ 0.11
SNX20-202ENST00000330943 RPS8P62241 208 aaKnown RBP15.71■□□□□ 0.11
SNX20-202ENST00000330943 ACCSLQ4AC99 568 aa15.71■□□□□ 0.11
SNX20-202ENST00000330943 DCAF17Q5H9S7 520 aaPredicted RBP15.71■□□□□ 0.11
SNX20-202ENST00000330943 SLFN11Q7Z7L1 901 aa15.71■□□□□ 0.11
SNX20-202ENST00000330943 SNED1Q8TER0 1413 aa15.71■□□□□ 0.11
SNX20-202ENST00000330943 U2AF1L4Q8WU68 220 aaKnown RBP15.71■□□□□ 0.11
SNX20-202ENST00000330943 CEP95Q96GE4 821 aa15.71■□□□□ 0.11
SNX20-202ENST00000330943 DDX25Q9UHL0 483 aaKnown RBP15.71■□□□□ 0.11
SNX20-202ENST00000330943 PON1P27169 355 aa15.71■□□□□ 0.1
SNX20-202ENST00000330943 CDK8P49336 464 aa15.71■□□□□ 0.1
SNX20-202ENST00000330943 SYCE1Q8N0S2 351 aa15.71■□□□□ 0.1
SNX20-202ENST00000330943 CCDC63Q8NA47 563 aa15.71■□□□□ 0.1
SNX20-202ENST00000330943 HAS1Q92839 578 aa15.71■□□□□ 0.1
SNX20-202ENST00000330943 ZNF317Q96PQ6 595 aaPredicted RBP15.71■□□□□ 0.1
SNX20-202ENST00000330943 ARMCX3Q9UH62 379 aaPredicted RBP15.71■□□□□ 0.1
SNX20-202ENST00000330943 ATAD5Q96QE3 1844 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 A0A1B0GUA9 196 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 SPDYE3A6NKU9 549 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 GNPATO15228 680 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 AFPP02771 609 aaKnown RBP15.7■□□□□ 0.1
SNX20-202ENST00000330943 CLTAP09496 248 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 PLA2G4BP0C869 781 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 TCERG1LQ5VWI1 586 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 PNMA8AQ86V59 439 aaPredicted RBP15.7■□□□□ 0.1
SNX20-202ENST00000330943 VPS36Q86VN1 386 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 DHX37Q8IY37 1157 aaKnown RBP15.7■□□□□ 0.1
SNX20-202ENST00000330943 TEX11Q8IYF3 940 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 CUL5Q93034 780 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 CENPTQ96BT3 561 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 RAB17Q9H0T7 212 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 AJAP1Q9UKB5 411 aaPredicted RBP15.7■□□□□ 0.1
SNX20-202ENST00000330943 PCDHA12Q9UN75 941 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 POTEB3A0JP26 581 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 POTECB2RU33 542 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 BUB1BO60566 1050 aaPredicted RBP15.7■□□□□ 0.1
SNX20-202ENST00000330943 BAG3O95817 575 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 PAX7P23759 505 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 NAA25Q14CX7 972 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 GRIK5Q16478 980 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 DPY19L2P1Q6NXN4 242 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 TLDC1Q6P9B6 456 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 POTEBQ6S5H4 581 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 LRRC34Q8IZ02 419 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 HES6Q96HZ4 224 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 ZNF287Q9HBT7 754 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 AMFRQ9UKV5 643 aa15.7■□□□□ 0.1
SNX20-202ENST00000330943 CASP5P51878 434 aa15.69■□□□□ 0.1
SNX20-202ENST00000330943 POU5F1Q01860 360 aaKnown RBP15.69■□□□□ 0.1
SNX20-202ENST00000330943 CRYMQ14894 314 aa15.69■□□□□ 0.1
SNX20-202ENST00000330943 FAM133BQ5BKY9 247 aaKnown RBP15.69■□□□□ 0.1
SNX20-202ENST00000330943 GJB7Q6PEY0 223 aa15.69■□□□□ 0.1
SNX20-202ENST00000330943 TXLNGYQ9BZA5 131 aa15.69■□□□□ 0.1
SNX20-202ENST00000330943 NT5C3AQ9H0P0 336 aa15.69■□□□□ 0.1
SNX20-202ENST00000330943 OSGEPQ9NPF4 335 aa15.69■□□□□ 0.1
SNX20-202ENST00000330943 NAV1Q8NEY1 1877 aa15.69■□□□□ 0.1
SNX20-202ENST00000330943 DDX3XO00571 662 aaKnown RBP eCLIP15.69■□□□□ 0.1
SNX20-202ENST00000330943 PRKCIP41743 596 aa15.69■□□□□ 0.1
SNX20-202ENST00000330943 DR1Q01658 176 aa15.69■□□□□ 0.1
SNX20-202ENST00000330943 EDRF1Q3B7T1 1238 aa15.69■□□□□ 0.1
SNX20-202ENST00000330943 DENND2CQ68D51 928 aa15.69■□□□□ 0.1
SNX20-202ENST00000330943 TBC1D1Q86TI0 1168 aaPredicted RBP15.69■□□□□ 0.1
SNX20-202ENST00000330943 NEDD1Q8NHV4 660 aa15.69■□□□□ 0.1
SNX20-202ENST00000330943 NEK9Q8TD19 979 aa15.69■□□□□ 0.1
SNX20-202ENST00000330943 ATXN2LQ8WWM7 1075 aaKnown RBP15.69■□□□□ 0.1
SNX20-202ENST00000330943 STAMBPL1Q96FJ0 436 aa15.69■□□□□ 0.1
SNX20-202ENST00000330943 ELAC2Q9BQ52 826 aaKnown RBP15.69■□□□□ 0.1
SNX20-202ENST00000330943 EPB41L4BQ9H329 900 aa15.69■□□□□ 0.1
SNX20-202ENST00000330943 RIOX1Q9H6W3 641 aa15.69■□□□□ 0.1
SNX20-202ENST00000330943 DOT1LQ8TEK3 1739 aa15.69■□□□□ 0.1
SNX20-202ENST00000330943 XRCC5P13010 732 aaKnown RBP15.68■□□□□ 0.1
SNX20-202ENST00000330943 CYP11B2P19099 503 aa15.68■□□□□ 0.1
SNX20-202ENST00000330943 PMS2P54278 862 aa15.68■□□□□ 0.1
SNX20-202ENST00000330943 PLTPP55058 493 aa15.68■□□□□ 0.1
SNX20-202ENST00000330943 ZC3H3Q8IXZ2 948 aaKnown RBP15.68■□□□□ 0.1
SNX20-202ENST00000330943 GLG1Q92896 1179 aa15.68■□□□□ 0.1
SNX20-202ENST00000330943 MTFR1LQ9H019 292 aa15.68■□□□□ 0.1
SNX20-202ENST00000330943 AZI2Q9H6S1 392 aa15.68■□□□□ 0.1
SNX20-202ENST00000330943 SAMD15Q9P1V8 674 aa15.68■□□□□ 0.1
SNX20-202ENST00000330943 SLC12A4Q9UP95 1085 aa15.68■□□□□ 0.1
SNX20-202ENST00000330943 SPATA31A5Q5VU36 1347 aa15.68■□□□□ 0.1
SNX20-202ENST00000330943 SPATA31A7Q8IWB4 1347 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms