RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 PCDHA6Q9UN73 950 aa22.3■■□□□ 1.16
CMTM4-201ENST00000330687 PCDHA8Q9Y5H6 950 aa22.3■■□□□ 1.16
CMTM4-201ENST00000330687 H2AFZP0C0S5 128 aa22.3■■□□□ 1.16
CMTM4-201ENST00000330687 CWF19L1Q69YN2 538 aaKnown RBP22.3■■□□□ 1.16
CMTM4-201ENST00000330687 H2AFVQ71UI9 128 aa22.3■■□□□ 1.16
CMTM4-201ENST00000330687 DNAJC10Q8IXB1 793 aa22.3■■□□□ 1.16
CMTM4-201ENST00000330687 MYOCDQ8IZQ8 938 aa22.3■■□□□ 1.16
CMTM4-201ENST00000330687 SNX29Q8TEQ0 813 aa22.3■■□□□ 1.16
CMTM4-201ENST00000330687 CCDC188H7C350 402 aa22.29■■□□□ 1.16
CMTM4-201ENST00000330687 RFX8Q6ZV50 586 aa22.29■■□□□ 1.16
CMTM4-201ENST00000330687 KRT28Q7Z3Y7 464 aa22.29■■□□□ 1.16
CMTM4-201ENST00000330687 LARP4BQ92615 738 aaKnown RBP22.29■■□□□ 1.16
CMTM4-201ENST00000330687 ASAP1Q9ULH1 1129 aa22.29■■□□□ 1.16
CMTM4-201ENST00000330687 AHCYL1O43865 530 aa22.29■■□□□ 1.16
CMTM4-201ENST00000330687 TAOK1Q7L7X3 1001 aa22.29■■□□□ 1.16
CMTM4-201ENST00000330687 C18orf8Q96DM3 657 aa22.29■■□□□ 1.16
CMTM4-201ENST00000330687 IQCDQ96DY2 449 aa22.29■■□□□ 1.16
CMTM4-201ENST00000330687 ISCA1Q9BUE6 129 aa22.29■■□□□ 1.16
CMTM4-201ENST00000330687 ADAM7Q9H2U9 754 aa22.29■■□□□ 1.16
CMTM4-201ENST00000330687 ENTPD5O75356 428 aa22.29■■□□□ 1.16
CMTM4-201ENST00000330687 MMP13P45452 471 aa22.29■■□□□ 1.16
CMTM4-201ENST00000330687 ZC3H18Q86VM9 953 aaKnown RBP22.29■■□□□ 1.16
CMTM4-201ENST00000330687 ERP27Q96DN0 273 aa22.29■■□□□ 1.16
CMTM4-201ENST00000330687 TGS1Q96RS0 853 aaKnown RBP22.29■■□□□ 1.16
CMTM4-201ENST00000330687 ERVK-5Q9HDB9 667 aa22.29■■□□□ 1.16
CMTM4-201ENST00000330687 BCL9LQ86UU0 1499 aa22.28■■□□□ 1.16
CMTM4-201ENST00000330687 FKBP3Q00688 224 aaKnown RBP22.28■■□□□ 1.16
CMTM4-201ENST00000330687 TSNAXIP1Q2TAA8 658 aa22.28■■□□□ 1.16
CMTM4-201ENST00000330687 TPCN2Q8NHX9 752 aa22.28■■□□□ 1.16
CMTM4-201ENST00000330687 TTC8Q8TAM2 541 aa22.28■■□□□ 1.16
CMTM4-201ENST00000330687 UCMAQ8WVF2 138 aa22.28■■□□□ 1.16
CMTM4-201ENST00000330687 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.28■■□□□ 1.16
CMTM4-201ENST00000330687 KCNJ1P48048 391 aa22.28■■□□□ 1.16
CMTM4-201ENST00000330687 DTX3LQ8TDB6 740 aa22.28■■□□□ 1.16
CMTM4-201ENST00000330687 ACTRT1Q8TDG2 376 aa22.28■■□□□ 1.16
CMTM4-201ENST00000330687 EZH1Q92800 747 aaPredicted RBP22.28■■□□□ 1.16
CMTM4-201ENST00000330687 GFPT2O94808 682 aa22.28■■□□□ 1.16
CMTM4-201ENST00000330687 MYBP10242 640 aa22.28■■□□□ 1.16
CMTM4-201ENST00000330687 PRPHP41219 470 aa22.28■■□□□ 1.16
CMTM4-201ENST00000330687 KLC1Q07866 573 aa22.28■■□□□ 1.16
CMTM4-201ENST00000330687 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.28■■□□□ 1.16
CMTM4-201ENST00000330687 MTRF1LQ9UGC7 380 aaKnown RBP22.28■■□□□ 1.16
CMTM4-201ENST00000330687 TMEM59LQ9UK28 342 aa22.28■■□□□ 1.16
CMTM4-201ENST00000330687 USH1CQ9Y6N9 552 aa22.28■■□□□ 1.16
CMTM4-201ENST00000330687 RIC1Q4ADV7 1423 aa22.27■■□□□ 1.16
CMTM4-201ENST00000330687 FESP07332 822 aa22.27■■□□□ 1.16
CMTM4-201ENST00000330687 CNGA2Q16280 664 aa22.27■■□□□ 1.16
CMTM4-201ENST00000330687 HERC4Q5GLZ8 1057 aaPredicted RBP22.27■■□□□ 1.16
CMTM4-201ENST00000330687 CCDC105Q8IYK2 499 aa22.27■■□□□ 1.16
CMTM4-201ENST00000330687 EPAS1Q99814 870 aa22.27■■□□□ 1.16
CMTM4-201ENST00000330687 TSPOAP1O95153 1857 aa22.27■■□□□ 1.16
CMTM4-201ENST00000330687 RCN2Q14257 317 aa22.27■■□□□ 1.16
CMTM4-201ENST00000330687 C6orf118Q5T5N4 469 aa22.27■■□□□ 1.16
CMTM4-201ENST00000330687 CNKSR1Q969H4 720 aa22.27■■□□□ 1.16
CMTM4-201ENST00000330687 C7orf25Q9BPX7 421 aa22.27■■□□□ 1.16
CMTM4-201ENST00000330687 NAGPAQ9UK23 515 aa22.27■■□□□ 1.16
CMTM4-201ENST00000330687 ADAM9Q13443 819 aa22.27■■□□□ 1.15
CMTM4-201ENST00000330687 SEPT2Q15019 361 aa22.27■■□□□ 1.15
CMTM4-201ENST00000330687 TRIP13Q15645 432 aaPredicted RBP22.27■■□□□ 1.15
CMTM4-201ENST00000330687 VPS36Q86VN1 386 aa22.27■■□□□ 1.15
CMTM4-201ENST00000330687 PNMA1Q8ND90 353 aa22.27■■□□□ 1.15
CMTM4-201ENST00000330687 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.27■■□□□ 1.15
CMTM4-201ENST00000330687 ERP44Q9BS26 406 aa22.27■■□□□ 1.15
CMTM4-201ENST00000330687 FGFBP2Q9BYJ0 223 aa22.27■■□□□ 1.15
CMTM4-201ENST00000330687 ARL2BPQ9Y2Y0 163 aa22.27■■□□□ 1.15
CMTM4-201ENST00000330687 NPHP3-ACAD11A0A0J9YXS1 232 aa22.26■■□□□ 1.15
CMTM4-201ENST00000330687 FLOT1O75955 427 aa22.26■■□□□ 1.15
CMTM4-201ENST00000330687 RTN3O95197 1032 aaPredicted RBP22.26■■□□□ 1.15
CMTM4-201ENST00000330687 MYL1P05976 194 aa22.26■■□□□ 1.15
CMTM4-201ENST00000330687 TFAP4Q01664 338 aa22.26■■□□□ 1.15
CMTM4-201ENST00000330687 SETDB1Q15047 1291 aa22.26■■□□□ 1.15
CMTM4-201ENST00000330687 GRIPAP1Q4V328 841 aa22.26■■□□□ 1.15
CMTM4-201ENST00000330687 LRRC23Q53EV4 343 aaPredicted RBP22.26■■□□□ 1.15
CMTM4-201ENST00000330687 APBB1IPQ7Z5R6 666 aaPredicted RBP22.26■■□□□ 1.15
CMTM4-201ENST00000330687 SRRM1Q8IYB3 904 aaKnown RBP22.26■■□□□ 1.15
CMTM4-201ENST00000330687 SUPT20HQ8NEM7 779 aa22.26■■□□□ 1.15
CMTM4-201ENST00000330687 DDX50Q9BQ39 737 aaKnown RBP22.26■■□□□ 1.15
CMTM4-201ENST00000330687 NUDT12Q9BQG2 462 aa22.26■■□□□ 1.15
CMTM4-201ENST00000330687 SLITRK6Q9H5Y7 841 aa22.26■■□□□ 1.15
CMTM4-201ENST00000330687 FBXO3Q9UK99 471 aa22.26■■□□□ 1.15
CMTM4-201ENST00000330687 DDAH1O94760 285 aa22.26■■□□□ 1.15
CMTM4-201ENST00000330687 CSF1RP07333 972 aa22.26■■□□□ 1.15
CMTM4-201ENST00000330687 ZNF131P52739 623 aa22.26■■□□□ 1.15
CMTM4-201ENST00000330687 ROR2Q01974 943 aaKnown RBP22.26■■□□□ 1.15
CMTM4-201ENST00000330687 KCNH2Q12809 1159 aa22.26■■□□□ 1.15
CMTM4-201ENST00000330687 RASIP1Q5U651 963 aa22.26■■□□□ 1.15
CMTM4-201ENST00000330687 LRRC55Q6ZSA7 311 aa22.26■■□□□ 1.15
CMTM4-201ENST00000330687 JAMLQ86YT9 394 aa22.26■■□□□ 1.15
CMTM4-201ENST00000330687 PICK1Q9NRD5 415 aa22.25■■□□□ 1.15
CMTM4-201ENST00000330687 TMEM260Q9NX78 707 aa22.25■■□□□ 1.15
CMTM4-201ENST00000330687 BCS1LQ9Y276 419 aa22.25■■□□□ 1.15
CMTM4-201ENST00000330687 BNIP1Q12981 228 aa22.25■■□□□ 1.15
CMTM4-201ENST00000330687 KIAA1755Q5JYT7 1200 aa22.25■■□□□ 1.15
CMTM4-201ENST00000330687 TBCKQ8TEA7 893 aa22.25■■□□□ 1.15
CMTM4-201ENST00000330687 DNAJC9Q8WXX5 260 aa22.25■■□□□ 1.15
CMTM4-201ENST00000330687 EPHB2P29323 1055 aa22.25■■□□□ 1.15
CMTM4-201ENST00000330687 PPP1R9AQ9ULJ8 1098 aa22.25■■□□□ 1.15
CMTM4-201ENST00000330687 USP17L3A6NCW0 530 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 USP17L4A6NCW7 530 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 BRAFP15056 766 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms