RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 TMEM179Q6ZVK1 233 aa15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 FRMD5Q7Z6J6 570 aa15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 LENG9Q96B70 501 aa15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 ZDHHC15Q96MV8 337 aa15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 TMEM51Q9NW97 253 aa15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 NAGPAQ9UK23 515 aa15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 MYO3BQ8WXR4 1341 aa15.35■□□□□ 0.05
ATP2C1-201ENST00000328560 NHSQ6T4R5 1651 aa15.35■□□□□ 0.05
ATP2C1-201ENST00000328560 VGLL3A8MV65 326 aa15.35■□□□□ 0.05
ATP2C1-201ENST00000328560 MARSP56192 900 aaKnown RBP15.35■□□□□ 0.05
ATP2C1-201ENST00000328560 NNTQ13423 1086 aa15.35■□□□□ 0.05
ATP2C1-201ENST00000328560 SAMM50Q9Y512 469 aa15.35■□□□□ 0.05
ATP2C1-201ENST00000328560 PCDHGC5Q9Y5F6 944 aa15.35■□□□□ 0.05
ATP2C1-201ENST00000328560 ECE2O60344 883 aa15.35■□□□□ 0.05
ATP2C1-201ENST00000328560 HOXA7P31268 230 aaPredicted RBP15.35■□□□□ 0.05
ATP2C1-201ENST00000328560 PRPF4BQ13523 1007 aaKnown RBP15.35■□□□□ 0.05
ATP2C1-201ENST00000328560 COG2Q14746 738 aa15.35■□□□□ 0.05
ATP2C1-201ENST00000328560 STRIP1Q5VSL9 837 aa15.35■□□□□ 0.05
ATP2C1-201ENST00000328560 NAA35Q5VZE5 725 aa15.35■□□□□ 0.05
ATP2C1-201ENST00000328560 PEX26Q7Z412 305 aa15.35■□□□□ 0.05
ATP2C1-201ENST00000328560 VPS36Q86VN1 386 aa15.35■□□□□ 0.05
ATP2C1-201ENST00000328560 DYDC2Q96IM9 177 aa15.35■□□□□ 0.05
ATP2C1-201ENST00000328560 INPP4AQ96PE3 977 aaPredicted RBP15.35■□□□□ 0.05
ATP2C1-201ENST00000328560 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.35■□□□□ 0.056e-6■■■■■ 93.2
ATP2C1-201ENST00000328560 RNF14Q9UBS8 474 aa15.35■□□□□ 0.05
ATP2C1-201ENST00000328560 DDX39AO00148 427 aaKnown RBP15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 FLOT1O75955 427 aa15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 ECE1P42892 770 aa15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 GLE1Q53GS7 698 aaKnown RBP15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 FOXR2Q6PJQ5 311 aa15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 ADAT2Q7Z6V5 191 aaKnown RBP15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 DAAM2Q86T65 1068 aa15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 DDX47Q9H0S4 455 aaKnown RBP15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 TYW1Q9NV66 732 aaKnown RBP15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 TRAF3IP3Q9Y228 551 aa15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 FRMD3A2A2Y4 597 aa15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 PDXKO00764 312 aa15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 RPS6KA5O75582 802 aa15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 KIF4AO95239 1232 aa15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 ALS2CLQ60I27 953 aa15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 USP38Q8NB14 1042 aa15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 MKL1Q969V6 931 aa15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 FAM20AQ96MK3 541 aa15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 CSRNP1Q96S65 589 aa15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 ASTN1O14525 1302 aa15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 A0A1W2PRG0 241 aa15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 FOSP01100 380 aaPredicted RBP15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 H2AFZP0C0S5 128 aa15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 SREBF1P36956 1147 aa15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 ARHGAP44Q17R89 818 aa15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 LRCH2Q5VUJ6 765 aa15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 H2AFVQ71UI9 128 aa15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 FAM186BQ8IYM0 893 aa15.34■□□□□ 0.05
ATP2C1-201ENST00000328560 TCP10L2B9ZVM9 353 aa15.33■□□□□ 0.05
ATP2C1-201ENST00000328560 TRIM49P0CI25 452 aa15.33■□□□□ 0.05
ATP2C1-201ENST00000328560 TRIM49CP0CI26 452 aa15.33■□□□□ 0.05
ATP2C1-201ENST00000328560 RINT1Q6NUQ1 792 aa15.33■□□□□ 0.05
ATP2C1-201ENST00000328560 ARHGAP27Q6ZUM4 889 aa15.33■□□□□ 0.05
ATP2C1-201ENST00000328560 SLC35C1Q96A29 364 aa15.33■□□□□ 0.05
ATP2C1-201ENST00000328560 TRIM31Q9BZY9 425 aa15.33■□□□□ 0.05
ATP2C1-201ENST00000328560 PRR12Q9ULL5 1215 aa15.33■□□□□ 0.05
ATP2C1-201ENST00000328560 HPDP32754 393 aaPredicted RBP15.33■□□□□ 0.04
ATP2C1-201ENST00000328560 EPHA7Q15375 998 aa15.33■□□□□ 0.04
ATP2C1-201ENST00000328560 CNKSR1Q969H4 720 aa15.33■□□□□ 0.04
ATP2C1-201ENST00000328560 FAM107BQ9H098 131 aa15.33■□□□□ 0.04
ATP2C1-201ENST00000328560 TSPYL1Q9H0U9 437 aa15.33■□□□□ 0.04
ATP2C1-201ENST00000328560 BCCIPQ9P287 314 aaKnown RBP eCLIP15.33■□□□□ 0.04
ATP2C1-201ENST00000328560 CLRN2A0PK11 232 aa15.33■□□□□ 0.04
ATP2C1-201ENST00000328560 KRIT1O00522 736 aa15.33■□□□□ 0.04
ATP2C1-201ENST00000328560 Q4G0T1 1027 aa15.33■□□□□ 0.04
ATP2C1-201ENST00000328560 CEP85LQ5SZL2 805 aa15.33■□□□□ 0.04
ATP2C1-201ENST00000328560 GLYCTKQ8IVS8 523 aa15.33■□□□□ 0.04
ATP2C1-201ENST00000328560 CAVIN3Q969G5 261 aa15.33■□□□□ 0.04
ATP2C1-201ENST00000328560 MBOAT7Q96N66 472 aa15.33■□□□□ 0.04
ATP2C1-201ENST00000328560 METTL14Q9HCE5 456 aaKnown RBP15.33■□□□□ 0.04
ATP2C1-201ENST00000328560 GDF3Q9NR23 364 aa15.33■□□□□ 0.04
ATP2C1-201ENST00000328560 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.33■□□□□ 0.04
ATP2C1-201ENST00000328560 SHTN1A0MZ66 631 aa15.32■□□□□ 0.04
ATP2C1-201ENST00000328560 PPIP5K2O43314 1243 aa15.32■□□□□ 0.04
ATP2C1-201ENST00000328560 PPP1R12BO60237 982 aaPredicted RBP15.32■□□□□ 0.04
ATP2C1-201ENST00000328560 EYA4O95677 639 aa15.32■□□□□ 0.04
ATP2C1-201ENST00000328560 RRP1BQ14684 758 aaKnown RBP15.32■□□□□ 0.04
ATP2C1-201ENST00000328560 IFI16Q16666 785 aaKnown RBP15.32■□□□□ 0.04
ATP2C1-201ENST00000328560 SYCP3Q8IZU3 236 aa15.32■□□□□ 0.04
ATP2C1-201ENST00000328560 METTL13Q8N6R0 699 aa15.32■□□□□ 0.04
ATP2C1-201ENST00000328560 ACER1Q8TDN7 264 aa15.32■□□□□ 0.04
ATP2C1-201ENST00000328560 EBAG9O00559 213 aa15.32■□□□□ 0.04
ATP2C1-201ENST00000328560 OPLAHO14841 1288 aa15.32■□□□□ 0.04
ATP2C1-201ENST00000328560 STAT1P42224 750 aa15.32■□□□□ 0.04
ATP2C1-201ENST00000328560 AOC3Q16853 763 aa15.32■□□□□ 0.04
ATP2C1-201ENST00000328560 TBC1D10BQ4KMP7 808 aaPredicted RBP15.32■□□□□ 0.04
ATP2C1-201ENST00000328560 OR2W6PQ8NHA6 318 aa15.32■□□□□ 0.04
ATP2C1-201ENST00000328560 PLCB1Q9NQ66 1216 aa15.32■□□□□ 0.04
ATP2C1-201ENST00000328560 VAV3Q9UKW4 847 aa15.32■□□□□ 0.04
ATP2C1-201ENST00000328560 BZW2Q9Y6E2 419 aaKnown RBP15.32■□□□□ 0.04
ATP2C1-201ENST00000328560 ZNF233A6NK53 670 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 TBX3O15119 743 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 GAS7O60861 476 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 LRRN2O75325 713 aa15.31■□□□□ 0.04
ATP2C1-201ENST00000328560 ITGA4P13612 1032 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms