RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 GIT2Q14161 759 aa14.04□□□□□ -0.16
HMGCS1-201ENST00000325110 ZNF746Q6NUN9 644 aaPredicted RBP14.04□□□□□ -0.16
HMGCS1-201ENST00000325110 CCDC26Q8TAB7 109 aa14.04□□□□□ -0.16
HMGCS1-201ENST00000325110 LRRC4BQ9NT99 713 aa14.04□□□□□ -0.16
HMGCS1-201ENST00000325110 LSP1P33241 339 aa14.04□□□□□ -0.16
HMGCS1-201ENST00000325110 ABCB5Q2M3G0 1257 aa14.04□□□□□ -0.16
HMGCS1-201ENST00000325110 ASTE1Q2TB18 679 aaPredicted RBP14.04□□□□□ -0.16
HMGCS1-201ENST00000325110 LRCH2Q5VUJ6 765 aa14.04□□□□□ -0.16
HMGCS1-201ENST00000325110 B4GALNT4Q76KP1 1039 aa14.04□□□□□ -0.16
HMGCS1-201ENST00000325110 WHAMMQ8TF30 809 aa14.04□□□□□ -0.16
HMGCS1-201ENST00000325110 ABCB11O95342 1321 aa14.04□□□□□ -0.16
HMGCS1-201ENST00000325110 DDTLA6NHG4 134 aaPredicted RBP14.04□□□□□ -0.16
HMGCS1-201ENST00000325110 FAM86B1E9PN63 330 aa14.04□□□□□ -0.16
HMGCS1-201ENST00000325110 TOM1O60784 492 aa14.04□□□□□ -0.16
HMGCS1-201ENST00000325110 GAS7O60861 476 aa14.04□□□□□ -0.16
HMGCS1-201ENST00000325110 FAM86B2P0C5J1 330 aa14.04□□□□□ -0.16
HMGCS1-201ENST00000325110 COG2Q14746 738 aa14.04□□□□□ -0.16
HMGCS1-201ENST00000325110 MICALCLQ6ZW33 695 aa14.04□□□□□ -0.16
HMGCS1-201ENST00000325110 CPLX4Q7Z7G2 160 aa14.04□□□□□ -0.16
HMGCS1-201ENST00000325110 GPATCH11Q8N954 259 aa14.04□□□□□ -0.16
HMGCS1-201ENST00000325110 COA1Q9GZY4 146 aa14.04□□□□□ -0.16
HMGCS1-201ENST00000325110 TMOD4Q9NZQ9 345 aa14.04□□□□□ -0.16
HMGCS1-201ENST00000325110 COL14A1Q05707 1796 aaKnown RBP14.04□□□□□ -0.16
HMGCS1-201ENST00000325110 GALCP54803 685 aa14.03□□□□□ -0.16
HMGCS1-201ENST00000325110 PPP1R18Q6NYC8 613 aa14.03□□□□□ -0.16
HMGCS1-201ENST00000325110 DYDC2Q96IM9 177 aa14.03□□□□□ -0.16
HMGCS1-201ENST00000325110 ATP6V1G3Q96LB4 118 aa14.03□□□□□ -0.16
HMGCS1-201ENST00000325110 EIF2AK1Q9BQI3 630 aaKnown RBP14.03□□□□□ -0.16
HMGCS1-201ENST00000325110 TDRD3Q9H7E2 651 aaKnown RBP14.03□□□□□ -0.16
HMGCS1-201ENST00000325110 DNAJC12Q9UKB3 198 aa14.03□□□□□ -0.16
HMGCS1-201ENST00000325110 GOLGA6L10A0A0M3HER8 536 aa14.03□□□□□ -0.16
HMGCS1-201ENST00000325110 EVI5O60447 810 aa14.03□□□□□ -0.16
HMGCS1-201ENST00000325110 CDR1P51861 262 aa14.03□□□□□ -0.16
HMGCS1-201ENST00000325110 PLTPP55058 493 aa14.03□□□□□ -0.16
HMGCS1-201ENST00000325110 ZFYVE27Q5T4F4 411 aa14.03□□□□□ -0.16
HMGCS1-201ENST00000325110 ARFGAP2Q8N6H7 521 aa14.03□□□□□ -0.16
HMGCS1-201ENST00000325110 HOOK2Q96ED9 719 aa14.03□□□□□ -0.16
HMGCS1-201ENST00000325110 INPP4AQ96PE3 977 aaPredicted RBP14.03□□□□□ -0.16
HMGCS1-201ENST00000325110 KCTD10Q9H3F6 313 aa14.03□□□□□ -0.16
HMGCS1-201ENST00000325110 RPS6KA5O75582 802 aa14.03□□□□□ -0.16
HMGCS1-201ENST00000325110 DRAP1Q14919 205 aaPredicted RBP14.03□□□□□ -0.16
HMGCS1-201ENST00000325110 CCDC17Q96LX7 622 aa14.03□□□□□ -0.16
HMGCS1-201ENST00000325110 GLT8D2Q9H1C3 349 aa14.03□□□□□ -0.16
HMGCS1-201ENST00000325110 GANQ9H2C0 597 aa14.03□□□□□ -0.16
HMGCS1-201ENST00000325110 METTL14Q9HCE5 456 aaKnown RBP14.03□□□□□ -0.16
HMGCS1-201ENST00000325110 CLRN2A0PK11 232 aa14.02□□□□□ -0.16
HMGCS1-201ENST00000325110 HGSO14964 777 aaPredicted RBP14.02□□□□□ -0.16
HMGCS1-201ENST00000325110 PPP1R37O75864 691 aa14.02□□□□□ -0.16
HMGCS1-201ENST00000325110 TRIM37O94972 964 aa14.02□□□□□ -0.16
HMGCS1-201ENST00000325110 LCA5LO95447 670 aa14.02□□□□□ -0.16
HMGCS1-201ENST00000325110 NDUFB10O96000 172 aa14.02□□□□□ -0.16
HMGCS1-201ENST00000325110 HSD17B3P37058 310 aa14.02□□□□□ -0.16
HMGCS1-201ENST00000325110 USP11P51784 963 aa14.02□□□□□ -0.16
HMGCS1-201ENST00000325110 HDLBPQ00341 1268 aaKnown RBP14.02□□□□□ -0.16
HMGCS1-201ENST00000325110 SYDE2Q5VT97 1194 aa14.02□□□□□ -0.16
HMGCS1-201ENST00000325110 PPP4R3CPQ6ZMV5 832 aa14.02□□□□□ -0.16
HMGCS1-201ENST00000325110 TYW1Q9NV66 732 aaKnown RBP14.02□□□□□ -0.16
HMGCS1-201ENST00000325110 GAKO14976 1311 aa14.02□□□□□ -0.16
HMGCS1-201ENST00000325110 TCP10L2B9ZVM9 353 aa14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 BMP3P12645 472 aa14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 SLCO1A2P46721 670 aa14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 ITIH3Q06033 890 aa14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 EDRF1Q3B7T1 1238 aa14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 RBM26Q5T8P6 1007 aaKnown RBP14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 CCDC121Q6ZUS5 278 aa14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 XIRP1Q702N8 1843 aaKnown RBP14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 RBM46Q8TBY0 533 aaKnown RBP14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 CAVIN3Q969G5 261 aa14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 CABS1Q96KC9 395 aa14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 CCDC114Q96M63 670 aa14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.02□□□□□ -0.178e-27■□□□□ 10.1
HMGCS1-201ENST00000325110 PTPN22Q9Y2R2 807 aa14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 SNX24Q9Y343 169 aa14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 PCDHGC5Q9Y5F6 944 aa14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 BZW2Q9Y6E2 419 aaKnown RBP14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 ARHGEF35A5YM69 484 aa14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 EML1O00423 815 aa14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 MSH4O15457 936 aa14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 SLC12A3P55017 1021 aa14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 GABPAQ06546 454 aa14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 COBLL1Q53SF7 1204 aa14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 TPCN2Q8NHX9 752 aa14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 PBKQ96KB5 322 aa14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 VEZTQ9HBM0 779 aa14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 HOMER2Q9NSB8 354 aa14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 AJAP1Q9UKB5 411 aaPredicted RBP14.02□□□□□ -0.17
HMGCS1-201ENST00000325110 ABCA3Q99758 1704 aa14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 MYO1FO00160 1098 aa14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 PSMC2P35998 433 aaKnown RBP14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 MAGOHP61326 146 aaKnown RBP14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 MESDQ14696 234 aa14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 FRMD5Q7Z6J6 570 aa14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 SYN2Q92777 582 aaPredicted RBP14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 GLG1Q92896 1179 aa14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 MAGOHBQ96A72 148 aaKnown RBP14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 CSRNP1Q96S65 589 aa14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 AIPL1Q9NZN9 384 aa14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 PI4KBQ9UBF8 816 aa14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 BUB1BO60566 1050 aaPredicted RBP14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 RPA1P27694 616 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms