RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 KDF1Q8NAX2 398 aaPredicted RBP3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 PCSK9Q8NBP7 692 aaKnown RBP3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 GALNT6Q8NCL4 622 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 PPTC7Q8NI37 304 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 GPKOWQ92917 476 aaPredicted RBP eCLIP3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 PHKBQ93100 1093 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 FGD4Q96M96 766 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 MTMR9Q96QG7 549 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 TXNRD2Q9NNW7 524 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 HOOK1Q9UJC3 728 aaKnown RBP3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 DBR1Q9UK59 544 aaKnown RBP3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 SRPRBQ9Y5M8 271 aaKnown RBP3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 SQORQ9Y6N5 450 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 UBE4BO95155 1302 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 MCM3APO60318 1980 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 IGSF9BQ9UPX0 1349 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 WDR64B1ANS9 1081 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 H0YCG3 227 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 MAPTP10636 758 aaKnown RBP3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 SLC16A2P36021 539 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 PSMC4P43686 418 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 SNRPFP62306 86 aaKnown RBP3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 POU5F1BQ06416 359 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 RBL2Q08999 1139 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 STK3Q13188 491 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 ALCAMQ13740 583 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 BAATQ14032 418 aaPredicted RBP3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 EPHA7Q15375 998 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 ZYXQ15942 572 aaKnown RBP3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 MUM1L1Q5H9M0 696 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 ODR4Q5SWX8 454 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 ANO1Q5XXA6 986 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 CCDC62Q6P9F0 684 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 ARMCX2Q7L311 632 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 HOMER1Q86YM7 354 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 NECAB1Q8N987 351 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 IGSF22Q8N9C0 903 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 ETNPPLQ8TBG4 499 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 TCEANC2Q96MN5 208 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 C17orf75Q9HAS0 396 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 AGO4Q9HCK5 861 aaKnown RBP3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 TIMMDC1Q9NPL8 285 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 ANKEF1Q9NU02 776 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 VPS54Q9P1Q0 977 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 DDX25Q9UHL0 483 aaKnown RBP3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 SERTAD1Q9UHV2 236 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 SMCHD1A6NHR9 2005 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 SLC35F4A4IF30 521 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 NFIBO00712 420 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 JAK2O60674 1132 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 AOC2O75106 756 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 PSAPP07602 524 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 CYP2C8P10632 490 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 RTP1P59025 263 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 POU5F1Q01860 360 aaKnown RBP3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 COBLL1Q53SF7 1204 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 ADALQ6DHV7 355 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 MIS18BP1Q6P0N0 1132 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 LYPD4Q6UWN0 246 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 SLC30A10Q6XR72 485 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 TMEM151AQ8N4L1 468 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 ARRDC4Q8NCT1 418 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 TBCKQ8TEA7 893 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 TMEM174Q8WUU8 243 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 ATP6V0A1Q93050 837 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 HVCN1Q96D96 273 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 PAGR1Q9BTK6 254 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 CCDC39Q9UFE4 941 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 ZNF215Q9UL58 517 aaPredicted RBP3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 MYH11P35749 1972 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 DOCK5Q9H7D0 1870 aa3.7□□□□□ -1.82
SCAMP1-201ENST00000320280 DCDC2BA2VCK2 349 aa3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 RRN3P2A6NIE6 340 aa3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 CTAGE5O15320 804 aa3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 PSMD10O75832 226 aa3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 LETM1O95202 739 aaPredicted RBP3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 CFBP00751 764 aa3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 HOXC8P31273 242 aa3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 MTMR1Q13613 665 aa3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 ACVR2BQ13705 512 aa3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 CALCRLQ16602 461 aa3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 CELF3Q5SZQ8 465 aaKnown RBP3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 OTOP1Q7RTM1 612 aa3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 NPAS3Q8IXF0 933 aa3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 C4orf19Q8IY42 314 aa3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 STK11IPQ8N1F8 1099 aa3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 C4orf32Q8N8J7 132 aa3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 ZNF296Q8WUU4 475 aaPredicted RBP3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 ZNF837Q96EG3 531 aaPredicted RBP3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 TSPAN18Q96SJ8 248 aa3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 PAK6Q9NQU5 681 aaPredicted RBP3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 FAM13BQ9NYF5 915 aa3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 TBC1D7Q9P0N9 293 aa3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 ISY1Q9ULR0 285 aaKnown RBP3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 LTBP2Q14767 1821 aa3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 A6NJR5 290 aa3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 PPFIA4O75335 1185 aa3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 ZNF865P0CJ78 1059 aaPredicted RBP3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 GNAT1P11488 350 aa3.69□□□□□ -1.82
SCAMP1-201ENST00000320280 KCNA2P16389 499 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms