RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 PGM5Q15124 567 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 TKFCQ3LXA3 575 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 HSP90B2PQ58FF3 399 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 TREML2Q5T2D2 321 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 SNRNP48Q6IEG0 339 aaKnown RBP14.36□□□□□ -0.11
CPNE1-201ENST00000317677 CSGALNACT2Q8N6G5 542 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 KAT2BQ92831 832 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 RUSC1Q9BVN2 902 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 VIPAS39Q9H9C1 493 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 KCNH7Q9NS40 1196 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 KIAA1217Q5T5P2 1943 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 IPO5O00410 1097 aaKnown RBP14.36□□□□□ -0.11
CPNE1-201ENST00000317677 ARHGAP6O43182 974 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 ADKP55263 362 aaKnown RBP14.36□□□□□ -0.11
CPNE1-201ENST00000317677 PSMD2Q13200 908 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 BAATQ14032 418 aaPredicted RBP14.36□□□□□ -0.11
CPNE1-201ENST00000317677 FAM26FQ5R3K3 315 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 NSMFQ6X4W1 530 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 RNF207Q6ZRF8 634 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 NIPA1Q7RTP0 329 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 ZNF507Q8TCN5 953 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 CLMNQ96JQ2 1002 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 PDCD2LQ9BRP1 358 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 PXMP2Q9NR77 195 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 MAP3K20Q9NYL2 800 aaKnown RBP14.36□□□□□ -0.11
CPNE1-201ENST00000317677 PKD2L1Q9P0L9 805 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 TBC1D7Q9P0N9 293 aa14.36□□□□□ -0.11
CPNE1-201ENST00000317677 RNF225M0QZC1 329 aaPredicted RBP14.35□□□□□ -0.11
CPNE1-201ENST00000317677 ATP2A1O14983 1001 aa14.35□□□□□ -0.11
CPNE1-201ENST00000317677 N4BP3O15049 544 aa14.35□□□□□ -0.11
CPNE1-201ENST00000317677 PPP1R2P41236 205 aa14.35□□□□□ -0.11
CPNE1-201ENST00000317677 AARSP49588 968 aaKnown RBP eCLIP14.35□□□□□ -0.11
CPNE1-201ENST00000317677 ZCWPW2Q504Y3 356 aa14.35□□□□□ -0.11
CPNE1-201ENST00000317677 KCNV1Q6PIU1 500 aa14.35□□□□□ -0.11
CPNE1-201ENST00000317677 SRGAP1Q7Z6B7 1085 aa14.35□□□□□ -0.11
CPNE1-201ENST00000317677 SAMD3Q8N6K7 520 aa14.35□□□□□ -0.11
CPNE1-201ENST00000317677 PIGOQ8TEQ8 1089 aa14.35□□□□□ -0.11
CPNE1-201ENST00000317677 CDCA5Q96FF9 252 aa14.35□□□□□ -0.11
CPNE1-201ENST00000317677 HHIPL1Q96JK4 782 aa14.35□□□□□ -0.11
CPNE1-201ENST00000317677 REEP2Q9BRK0 252 aa14.35□□□□□ -0.11
CPNE1-201ENST00000317677 BHMT2Q9H2M3 363 aa14.35□□□□□ -0.11
CPNE1-201ENST00000317677 AGO4Q9HCK5 861 aaKnown RBP14.35□□□□□ -0.11
CPNE1-201ENST00000317677 TUFT1Q9NNX1 390 aa14.35□□□□□ -0.11
CPNE1-201ENST00000317677 JADE2Q9NQC1 790 aa14.35□□□□□ -0.11
CPNE1-201ENST00000317677 TMOD4Q9NZQ9 345 aa14.35□□□□□ -0.11
CPNE1-201ENST00000317677 DNM3Q9UQ16 869 aa14.35□□□□□ -0.11
CPNE1-201ENST00000317677 RABGAP1Q9Y3P9 1069 aa14.35□□□□□ -0.11
CPNE1-201ENST00000317677 CTDP1Q9Y5B0 961 aaPredicted RBP14.35□□□□□ -0.11
CPNE1-201ENST00000317677 DOCK5Q9H7D0 1870 aa14.35□□□□□ -0.11
CPNE1-201ENST00000317677 WDR81Q562E7 1941 aa14.35□□□□□ -0.11
CPNE1-201ENST00000317677 BICDL2A1A5D9 508 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 RSPH10B2B2RC85 870 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 DDX39AO00148 427 aaKnown RBP14.34□□□□□ -0.11
CPNE1-201ENST00000317677 SHOX2O60902 331 aaPredicted RBP14.34□□□□□ -0.11
CPNE1-201ENST00000317677 EYA4O95677 639 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 RSPH10BP0C881 870 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 EEF1GP26641 437 aaKnown RBP14.34□□□□□ -0.11
CPNE1-201ENST00000317677 OAZ1P54368 228 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 RBL2Q08999 1139 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 LRRC55Q6ZSA7 311 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 SAPCD2Q86UD0 394 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 MIEF2Q96C03 454 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 CAPNS2Q96L46 248 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 CNOT6LQ96LI5 555 aaKnown RBP14.34□□□□□ -0.11
CPNE1-201ENST00000317677 RMDN3Q96TC7 470 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 RIT2Q99578 217 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 TEKT3Q9BXF9 490 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 ANKZF1Q9H8Y5 726 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 POLD4Q9HCU8 107 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 PPP2R2CQ9Y2T4 447 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 STK24Q9Y6E0 443 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 ITIH6Q6UXX5 1313 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 LGALS16A8MUM7 142 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 TMCO5BA8MYB1 307 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 GYPCP04921 128 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 CASP5P51878 434 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 EPHA7Q15375 998 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 FILIP1LQ4L180 1135 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 TPH2Q8IWU9 490 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 CEP112Q8N8E3 955 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 C2orf69Q8N8R5 385 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 NOC3LQ8WTT2 800 aaKnown RBP14.34□□□□□ -0.11
CPNE1-201ENST00000317677 SCFD1Q8WVM8 642 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 SGSM3Q96HU1 749 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 ELP3Q9H9T3 547 aa14.34□□□□□ -0.11
CPNE1-201ENST00000317677 ATXN2Q99700 1313 aaKnown RBP14.34□□□□□ -0.11
CPNE1-201ENST00000317677 LOXHD1Q8IVV2 1947 aa14.33□□□□□ -0.12
CPNE1-201ENST00000317677 ATP9AO75110 1047 aa14.33□□□□□ -0.12
CPNE1-201ENST00000317677 N4BP1O75113 896 aaKnown RBP14.33□□□□□ -0.12
CPNE1-201ENST00000317677 FXR1P51114 621 aaKnown RBP eCLIP14.33□□□□□ -0.12
CPNE1-201ENST00000317677 GRM1Q13255 1194 aa14.33□□□□□ -0.12
CPNE1-201ENST00000317677 NEDD9Q14511 834 aa14.33□□□□□ -0.12
CPNE1-201ENST00000317677 MAP9Q49MG5 647 aa14.33□□□□□ -0.12
CPNE1-201ENST00000317677 MIIPQ5JXC2 388 aa14.33□□□□□ -0.12
CPNE1-201ENST00000317677 RINT1Q6NUQ1 792 aa14.33□□□□□ -0.12
CPNE1-201ENST00000317677 CCDC65Q8IXS2 484 aa14.33□□□□□ -0.12
CPNE1-201ENST00000317677 MYOCDQ8IZQ8 938 aa14.33□□□□□ -0.12
CPNE1-201ENST00000317677 BMP2KQ9NSY1 1161 aaPredicted RBP14.33□□□□□ -0.12
CPNE1-201ENST00000317677 PNMA2Q9UL42 364 aa14.33□□□□□ -0.12
CPNE1-201ENST00000317677 MYPNQ86TC9 1320 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms