RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 GGA1Q9UJY5 639 aa15.08■□□□□ 0.01
MKS1-201ENST00000313863 NPHP3-ACAD11A0A0J9YXS1 232 aa15.08■□□□□ 0
MKS1-201ENST00000313863 GOLGA6L10A0A0M3HER8 536 aa15.08■□□□□ 0
MKS1-201ENST00000313863 MYO1FO00160 1098 aa15.08■□□□□ 0
MKS1-201ENST00000313863 CHUKO15111 745 aa15.08■□□□□ 0
MKS1-201ENST00000313863 ACTN1P12814 892 aa15.08■□□□□ 0
MKS1-201ENST00000313863 STAT1P42224 750 aa15.08■□□□□ 0
MKS1-201ENST00000313863 MMP14P50281 582 aa15.08■□□□□ 0
MKS1-201ENST00000313863 JAM2P57087 298 aa15.08■□□□□ 0
MKS1-201ENST00000313863 TMC3Q7Z5M5 1100 aa15.08■□□□□ 0
MKS1-201ENST00000313863 CROCCP2Q86T23 111 aa15.08■□□□□ 0
MKS1-201ENST00000313863 CCDC13Q8IYE1 715 aa15.08■□□□□ 0
MKS1-201ENST00000313863 CACNA2D3Q8IZS8 1091 aa15.08■□□□□ 0
MKS1-201ENST00000313863 CCDC24Q8N4L8 307 aa15.08■□□□□ 0
MKS1-201ENST00000313863 HES6Q96HZ4 224 aa15.08■□□□□ 0
MKS1-201ENST00000313863 DDX47Q9H0S4 455 aaKnown RBP15.08■□□□□ 0
MKS1-201ENST00000313863 BCCIPQ9P287 314 aaKnown RBP eCLIP15.08■□□□□ 0
MKS1-201ENST00000313863 C5orf60A6NFR6 353 aa15.07■□□□□ 0
MKS1-201ENST00000313863 PPP1R11O60927 126 aaPredicted RBP15.07■□□□□ 0
MKS1-201ENST00000313863 ZBTB48P10074 688 aaPredicted RBP15.07■□□□□ 0
MKS1-201ENST00000313863 AKR1B1P15121 316 aa15.07■□□□□ 0
MKS1-201ENST00000313863 GSCP56915 257 aaPredicted RBP15.07■□□□□ 0
MKS1-201ENST00000313863 IFFO1Q0D2I5 559 aa15.07■□□□□ 0
MKS1-201ENST00000313863 GIT2Q14161 759 aa15.07■□□□□ 0
MKS1-201ENST00000313863 NFIXQ14938 502 aa15.07■□□□□ 0
MKS1-201ENST00000313863 ARSHQ5FYA8 562 aa15.07■□□□□ 0
MKS1-201ENST00000313863 DCAF17Q5H9S7 520 aaPredicted RBP15.07■□□□□ 0
MKS1-201ENST00000313863 NT5DC3Q86UY8 548 aa15.07■□□□□ 0
MKS1-201ENST00000313863 SYT2Q8N9I0 419 aaPredicted RBP15.07■□□□□ 0
MKS1-201ENST00000313863 RPGRQ92834 1020 aaKnown RBP15.07■□□□□ 0
MKS1-201ENST00000313863 CENPTQ96BT3 561 aa15.07■□□□□ 0
MKS1-201ENST00000313863 KANSL2Q9H9L4 492 aa15.07■□□□□ 0
MKS1-201ENST00000313863 NCANO14594 1321 aa15.07■□□□□ 0
MKS1-201ENST00000313863 GREB1LQ9C091 1923 aaPredicted RBP15.07■□□□□ 0
MKS1-201ENST00000313863 TRIM37O94972 964 aa15.07■□□□□ 0
MKS1-201ENST00000313863 NR3C1P04150 777 aa15.07■□□□□ 0
MKS1-201ENST00000313863 GAP43P17677 238 aa15.07■□□□□ 0
MKS1-201ENST00000313863 GBP1P32455 592 aa15.07■□□□□ 0
MKS1-201ENST00000313863 GPSM2P81274 684 aa15.07■□□□□ 0
MKS1-201ENST00000313863 CACNB1Q02641 598 aaPredicted RBP15.07■□□□□ 0
MKS1-201ENST00000313863 KRT71Q3SY84 523 aa15.07■□□□□ 0
MKS1-201ENST00000313863 GKAP1Q5VSY0 366 aaPredicted RBP15.07■□□□□ 0
MKS1-201ENST00000313863 CCDC114Q96M63 670 aa15.07■□□□□ 0
MKS1-201ENST00000313863 PSMD1Q99460 953 aa15.07■□□□□ 0
MKS1-201ENST00000313863 ANO3Q9BYT9 981 aa15.07■□□□□ 0
MKS1-201ENST00000313863 KLC4Q9NSK0 619 aa15.07■□□□□ 0
MKS1-201ENST00000313863 GCNT4Q9P109 453 aa15.07■□□□□ 0
MKS1-201ENST00000313863 FAM187AA6NFU0 413 aa15.06■□□□□ 0
MKS1-201ENST00000313863 DAPK3O43293 454 aa15.06■□□□□ 0
MKS1-201ENST00000313863 PPFIA2O75334 1257 aa15.06■□□□□ 0
MKS1-201ENST00000313863 TBCAO75347 108 aaKnown RBP15.06■□□□□ 0
MKS1-201ENST00000313863 MED24O75448 989 aa15.06■□□□□ 0
MKS1-201ENST00000313863 RPA1P27694 616 aa15.06■□□□□ 0
MKS1-201ENST00000313863 DHX9Q08211 1270 aaKnown RBP15.06■□□□□ 0
MKS1-201ENST00000313863 TCERG1LQ5VWI1 586 aa15.06■□□□□ 0
MKS1-201ENST00000313863 DDX42Q86XP3 938 aaKnown RBP eCLIP15.06■□□□□ 0
MKS1-201ENST00000313863 CNBD1Q8NA66 436 aa15.06■□□□□ 0
MKS1-201ENST00000313863 U2AF1L4Q8WU68 220 aaKnown RBP15.06■□□□□ 0
MKS1-201ENST00000313863 DDX20Q9UHI6 824 aaKnown RBP15.06■□□□□ 0
MKS1-201ENST00000313863 AMACRQ9UHK6 382 aa15.06■□□□□ 0
MKS1-201ENST00000313863 SERPINB13Q9UIV8 391 aa15.06■□□□□ 0
MKS1-201ENST00000313863 NOVA2Q9UNW9 492 aaKnown RBP15.06■□□□□ 0
MKS1-201ENST00000313863 SUGT1Q9Y2Z0 365 aa15.06■□□□□ 0
MKS1-201ENST00000313863 F8VZ95 297 aa15.05■□□□□ 0
MKS1-201ENST00000313863 TMEM253P0C7T8 217 aa15.05■□□□□ 0
MKS1-201ENST00000313863 MAP2K2P36507 400 aa15.05■□□□□ 0
MKS1-201ENST00000313863 SFR1Q86XK3 245 aa15.05■□□□□ 0
MKS1-201ENST00000313863 RBM46Q8TBY0 533 aaKnown RBP15.05■□□□□ 0
MKS1-201ENST00000313863 RFFLQ8WZ73 363 aa15.05■□□□□ 0
MKS1-201ENST00000313863 FMO2Q99518 471 aa15.05■□□□□ 0
MKS1-201ENST00000313863 RASAL2Q9UJF2 1139 aa15.05■□□□□ 0
MKS1-201ENST00000313863 DAGLAQ9Y4D2 1042 aa15.05■□□□□ 0
MKS1-201ENST00000313863 POTEFA5A3E0 1075 aa15.05■□□□□ -0
MKS1-201ENST00000313863 USP17L10C9JJH3 530 aa15.05■□□□□ -0
MKS1-201ENST00000313863 RASSF9O75901 435 aa15.05■□□□□ -0
MKS1-201ENST00000313863 POTEIP0CG38 1075 aa15.05■□□□□ -0
MKS1-201ENST00000313863 HSPA6P17066 643 aa15.05■□□□□ -0
MKS1-201ENST00000313863 EIF6P56537 245 aaKnown RBP15.05■□□□□ -0
MKS1-201ENST00000313863 DHX34Q14147 1143 aaKnown RBP15.05■□□□□ -0
MKS1-201ENST00000313863 LACTB2Q53H82 288 aaPredicted RBP15.05■□□□□ -0
MKS1-201ENST00000313863 POTEGQ6S5H5 508 aa15.05■□□□□ -0
MKS1-201ENST00000313863 POTEEQ6S8J3 1075 aa15.05■□□□□ -0
MKS1-201ENST00000313863 CPLX4Q7Z7G2 160 aa15.05■□□□□ -0
MKS1-201ENST00000313863 OR2W6PQ8NHA6 318 aa15.05■□□□□ -0
MKS1-201ENST00000313863 CTNNBL1Q8WYA6 563 aaPredicted RBP15.05■□□□□ -0
MKS1-201ENST00000313863 SEC16BQ96JE7 1060 aa15.05■□□□□ -0
MKS1-201ENST00000313863 FAM20AQ96MK3 541 aa15.05■□□□□ -0
MKS1-201ENST00000313863 REEP2Q9BRK0 252 aa15.05■□□□□ -0
MKS1-201ENST00000313863 CARD9Q9H257 536 aa15.05■□□□□ -0
MKS1-201ENST00000313863 NEUROG2Q9H2A3 272 aa15.05■□□□□ -0
MKS1-201ENST00000313863 SIX2Q9NPC8 291 aa15.05■□□□□ -0
MKS1-201ENST00000313863 DDX3XO00571 662 aaKnown RBP eCLIP15.04■□□□□ -06e-6■□□□□ 8.9
MKS1-201ENST00000313863 BTAF1O14981 1849 aa15.04■□□□□ -0
MKS1-201ENST00000313863 TTI1O43156 1089 aa15.04■□□□□ -0
MKS1-201ENST00000313863 AKAP3O75969 853 aa15.04■□□□□ -0
MKS1-201ENST00000313863 FOSP01100 380 aaPredicted RBP15.04■□□□□ -0
MKS1-201ENST00000313863 HLA-DOAP06340 250 aa15.04■□□□□ -0
MKS1-201ENST00000313863 GHRP10912 638 aa15.04■□□□□ -0
MKS1-201ENST00000313863 PTENP60484 403 aa15.04■□□□□ -0
MKS1-201ENST00000313863 NFIL3Q16649 462 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms