RNA–Protein interactions for RNA: ENST00000310483.10

SLC39A1-201, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-201ENST00000310483 EPHA7Q15375 998 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 IFI16Q16666 785 aaKnown RBP17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 C10orf76Q5T2E6 689 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 DCAF12L1Q5VU92 463 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 KCTD1Q719H9 257 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 H2AFVQ71UI9 128 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 CPLX4Q7Z7G2 160 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 SLFN11Q7Z7L1 901 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 SFR1Q86XK3 245 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 SCLT1Q96NL6 688 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 PSMD1Q99460 953 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 NYXQ9GZU5 481 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 NT5C3AQ9H0P0 336 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 TPX2Q9ULW0 747 aaKnown RBP17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 GPR75-ASB3A0A0A6YYF3 556 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 PNMA6FA0A0J9YX94 578 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 C5orf60A6NFR6 353 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 RSPH10B2B2RC85 870 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 FLOT1O75955 427 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 CCDC172P0C7W6 258 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 RSPH10BP0C881 870 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 NOVP48745 357 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 IFFO1Q0D2I5 559 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 PABPC4Q13310 644 aaKnown RBP eCLIP17.15■□□□□ 0.343e-8■■■■□ 20.9
SLC39A1-201ENST00000310483 DRP2Q13474 957 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 MTMR3Q13615 1198 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 LNX1Q8TBB1 728 aaPredicted RBP17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 CUL5Q93034 780 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 DHX36Q9H2U1 1008 aaKnown RBP17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 ACTR5Q9H9F9 607 aaPredicted RBP17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 ERVK-5Q9HDB9 667 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 PPP1R9AQ9ULJ8 1098 aa17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 RTCBQ9Y3I0 505 aaKnown RBP17.15■□□□□ 0.34
SLC39A1-201ENST00000310483 SPATA31A1Q5TZJ5 1347 aa17.14■□□□□ 0.33
SLC39A1-201ENST00000310483 KDM3AQ9Y4C1 1321 aa17.14■□□□□ 0.33
SLC39A1-201ENST00000310483 SMIM23A6NLE4 172 aa17.14■□□□□ 0.33
SLC39A1-201ENST00000310483 CCDC188H7C350 402 aa17.14■□□□□ 0.33
SLC39A1-201ENST00000310483 hCG_1984214I3L0E3 225 aa17.14■□□□□ 0.33
SLC39A1-201ENST00000310483 BUB1BO60566 1050 aaPredicted RBP17.14■□□□□ 0.33
SLC39A1-201ENST00000310483 PAEPP09466 180 aa17.14■□□□□ 0.33
SLC39A1-201ENST00000310483 GALCP54803 685 aa17.14■□□□□ 0.33
SLC39A1-201ENST00000310483 POU5F1Q01860 360 aaKnown RBP17.14■□□□□ 0.33
SLC39A1-201ENST00000310483 ZNF211Q13398 564 aaPredicted RBP17.14■□□□□ 0.33
SLC39A1-201ENST00000310483 EDRF1Q3B7T1 1238 aa17.14■□□□□ 0.33
SLC39A1-201ENST00000310483 PREPLQ4J6C6 727 aaPredicted RBP17.14■□□□□ 0.33
SLC39A1-201ENST00000310483 ZNF713Q8N859 430 aaPredicted RBP17.14■□□□□ 0.33
SLC39A1-201ENST00000310483 GLG1Q92896 1179 aa17.14■□□□□ 0.33
SLC39A1-201ENST00000310483 SUCLA2Q9P2R7 463 aaPredicted RBP17.14■□□□□ 0.33
SLC39A1-201ENST00000310483 XRCC5P13010 732 aaKnown RBP17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 ABCB4P21439 1286 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 GIT2Q14161 759 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 E2F5Q15329 346 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 SNCBQ16143 134 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 ASPRV1Q53RT3 343 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 CCDC26Q8TAB7 109 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 HES6Q96HZ4 224 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 REEP2Q9BRK0 252 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 EPB41L4BQ9H329 900 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 SLITRK6Q9H5Y7 841 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 PSTPIP2Q9H939 334 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 GOPCQ9HD26 462 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 GCNT4Q9P109 453 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 MCM8Q9UJA3 840 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 UTP11Q9Y3A2 253 aaKnown RBP17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 NHSQ6T4R5 1651 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 COL16A1Q07092 1604 aaPredicted RBP17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 FRMD3A2A2Y4 597 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 PRKCIP41743 596 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 JAM2P57087 298 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 ZNF543Q08ER8 600 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 KNOP1Q1ED39 458 aaKnown RBP17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 AADACL2Q6P093 401 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 TPTE2Q6XPS3 522 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 ZNF804AQ7Z570 1209 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 FRMD5Q7Z6J6 570 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 GLYCTKQ8IVS8 523 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 OLIG1Q8TAK6 271 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 CCT6BQ92526 530 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 HVCN1Q96D96 273 aa17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 BZW2Q9Y6E2 419 aaKnown RBP17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 TNRC6CQ9HCJ0 1690 aaKnown RBP17.13■□□□□ 0.33
SLC39A1-201ENST00000310483 SNHG28P0DPA3 235 aa17.12■□□□□ 0.33
SLC39A1-201ENST00000310483 HOXA7P31268 230 aaPredicted RBP17.12■□□□□ 0.33
SLC39A1-201ENST00000310483 GKAP1Q5VSY0 366 aaPredicted RBP17.12■□□□□ 0.33
SLC39A1-201ENST00000310483 CATSPER3Q86XQ3 398 aa17.12■□□□□ 0.33
SLC39A1-201ENST00000310483 UHMK1Q8TAS1 419 aaKnown RBP17.12■□□□□ 0.33
SLC39A1-201ENST00000310483 SEC14L1Q92503 715 aa17.12■□□□□ 0.33
SLC39A1-201ENST00000310483 FMO2Q99518 471 aa17.12■□□□□ 0.33
SLC39A1-201ENST00000310483 MTFR1LQ9H019 292 aa17.12■□□□□ 0.33
SLC39A1-201ENST00000310483 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.12■□□□□ 0.33
SLC39A1-201ENST00000310483 PCDHB13Q9Y5F0 798 aa17.12■□□□□ 0.33
SLC39A1-201ENST00000310483 CTNND1O60716 968 aaKnown RBP17.12■□□□□ 0.33
SLC39A1-201ENST00000310483 C3orf20Q8ND61 904 aa17.12■□□□□ 0.33
SLC39A1-201ENST00000310483 SLC35G2Q8TBE7 412 aa17.12■□□□□ 0.33
SLC39A1-201ENST00000310483 TLCD1Q96CP7 247 aa17.12■□□□□ 0.33
SLC39A1-201ENST00000310483 XPO6Q96QU8 1125 aaKnown RBP17.12■□□□□ 0.33
SLC39A1-201ENST00000310483 SELENOSQ9BQE4 189 aa17.12■□□□□ 0.33
SLC39A1-201ENST00000310483 NARFQ9UHQ1 456 aa17.12■□□□□ 0.33
SLC39A1-201ENST00000310483 TLDC2A0PJX2 215 aa17.11■□□□□ 0.33
SLC39A1-201ENST00000310483 SPDYE3A6NKU9 549 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms