RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 KLHL23Q8NBE8 558 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 EIF2AK1Q9BQI3 630 aaKnown RBP6.55□□□□□ -1.36
SEC22A-201ENST00000309934 XPO4Q9C0E2 1151 aaKnown RBP6.55□□□□□ -1.36
SEC22A-201ENST00000309934 HOMER2Q9NSB8 354 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 RGS17Q9UGC6 210 aaPredicted RBP6.55□□□□□ -1.36
SEC22A-201ENST00000309934 NFASCO94856 1347 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 MYH2Q9UKX2 1941 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 ARHGEF37A1IGU5 675 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 M0QZ92 97 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 P4HA2O15460 535 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 CEP104O60308 925 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 EXOC3O60645 756 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 DGAT1O75907 488 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 STK10O94804 968 aaKnown RBP6.55□□□□□ -1.36
SEC22A-201ENST00000309934 GFPT2O94808 682 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 CAPN2P17655 700 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 PTPRAP18433 802 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 PAX7P23759 505 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 POLGP54098 1239 aaPredicted RBP6.55□□□□□ -1.36
SEC22A-201ENST00000309934 HMGCS2P54868 508 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 TNFAIP2Q03169 654 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 GRIK5Q16478 980 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 MAP7D1Q3KQU3 841 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 USP17L6PQ6QN14 398 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 SYT10Q6XYQ8 523 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 INTS8Q75QN2 995 aaKnown RBP6.55□□□□□ -1.36
SEC22A-201ENST00000309934 DPP9Q86TI2 863 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 RIOX2Q8IUF8 465 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 GPRC5AQ8NFJ5 357 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 SLC5A5Q92911 643 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 PAGR1Q9BTK6 254 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 AP5M1Q9H0R1 490 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 CACNA1SQ13698 1873 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 ANKRD62A6NC57 917 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 MAGEB2O15479 319 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 KPNA6O60684 536 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 RASSF7Q02833 373 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 FOXD4Q12950 439 aaPredicted RBP6.55□□□□□ -1.36
SEC22A-201ENST00000309934 ASIC2Q16515 512 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 CEP135Q66GS9 1140 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 CATSPERGQ6ZRH7 1159 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 DYMQ7RTS9 669 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 SAMD7Q7Z3H4 446 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 ADSSL1Q8N142 457 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 SYT2Q8N9I0 419 aaPredicted RBP6.55□□□□□ -1.36
SEC22A-201ENST00000309934 ZBED3Q96IU2 234 aaPredicted RBP6.55□□□□□ -1.36
SEC22A-201ENST00000309934 RSRC1Q96IZ7 334 aaKnown RBP6.55□□□□□ -1.36
SEC22A-201ENST00000309934 FHDC1Q9C0D6 1143 aaPredicted RBP6.55□□□□□ -1.36
SEC22A-201ENST00000309934 BLZF1Q9H2G9 400 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 MMRN2Q9H8L6 949 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 SLC9A2Q9UBY0 812 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 GLTPD2A6NH11 291 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 CCDC169A6NNP5 214 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 K7ENM7 598 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 NFKBIEO00221 500 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 AFPP02771 609 aaKnown RBP6.54□□□□□ -1.36
SEC22A-201ENST00000309934 FERP16591 822 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 PTGER2P43116 358 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 STX17P56962 302 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 ADAM9Q13443 819 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 SEPT7Q16181 437 aaKnown RBP6.54□□□□□ -1.36
SEC22A-201ENST00000309934 PPP2R5EQ16537 467 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 TMEM119Q4V9L6 283 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 TCP11X2Q5H9J9 407 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 ISM2Q6H9L7 571 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 MYLK4Q86YV6 388 aaPredicted RBP6.54□□□□□ -1.36
SEC22A-201ENST00000309934 SYCE1Q8N0S2 351 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 GLG1Q92896 1179 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 CCDC102AQ96A19 550 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 L3MBTL3Q96JM7 780 aaPredicted RBP6.54□□□□□ -1.36
SEC22A-201ENST00000309934 CNOT6LQ96LI5 555 aaKnown RBP6.54□□□□□ -1.36
SEC22A-201ENST00000309934 CCDC114Q96M63 670 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 MTMR9Q96QG7 549 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 TUBGCP2Q9BSJ2 902 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 SELENOOQ9BVL4 669 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 FTOQ9C0B1 505 aaKnown RBP eCLIP6.54□□□□□ -1.36
SEC22A-201ENST00000309934 FANCLQ9NW38 375 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 TMEM260Q9NX78 707 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 AGTPBP1Q9UPW5 1226 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 RRP15Q9Y3B9 282 aaKnown RBP6.54□□□□□ -1.36
SEC22A-201ENST00000309934 LGALS16A8MUM7 142 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 VWA5AO00534 786 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 PHACTR2O75167 634 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 TDP2O95551 362 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 NR3C2P08235 984 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 ZBED6P86452 979 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 ENPEPQ07075 957 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 COASYQ13057 564 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 CCDC92Q53HC0 331 aaPredicted RBP6.54□□□□□ -1.36
SEC22A-201ENST00000309934 SFMBT2Q5VUG0 894 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 ENOSF1Q7L5Y1 443 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 SH3RF1Q7Z6J0 888 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 MBOAT7Q96N66 472 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 NAP1L3Q99457 506 aaPredicted RBP6.54□□□□□ -1.36
SEC22A-201ENST00000309934 FUCA2Q9BTY2 467 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 MOV10L1Q9BXT6 1211 aaKnown RBP6.54□□□□□ -1.36
SEC22A-201ENST00000309934 HAUS4Q9H6D7 363 aa6.54□□□□□ -1.36
SEC22A-201ENST00000309934 JPH1Q9HDC5 661 aaPredicted RBP6.54□□□□□ -1.36
SEC22A-201ENST00000309934 TNS1Q9HBL0 1735 aaKnown RBP6.54□□□□□ -1.36
SEC22A-201ENST00000309934 FAM196BA6NMK8 535 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms