RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 CROCCP2Q86T23 111 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 OSBPL1AQ9BXW6 950 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 PKD1L3Q7Z443 1732 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 ARHGAP42A6NI28 874 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 TM4SF1P30408 202 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 CCDC92Q53HC0 331 aaPredicted RBP10.03□□□□□ -0.8
XCR1-201ENST00000309285 RRAGAQ7L523 313 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 CCHCR1Q8TD31 782 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 PANK4Q9NVE7 773 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 MYCP01106 439 aaPredicted RBP10.03□□□□□ -0.8
XCR1-201ENST00000309285 BMP3P12645 472 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 PDCD2Q16342 344 aaPredicted RBP10.03□□□□□ -0.8
XCR1-201ENST00000309285 BSPRYQ5W0U4 402 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 SLC51AQ86UW1 340 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 AMIGO3Q86WK7 504 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 ZMYND12Q9H0C1 365 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 PFDN4Q9NQP4 134 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 SUGT1Q9Y2Z0 365 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 GAS7O60861 476 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 TADA3O75528 432 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 ABL1P00519 1130 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 TCP1P17987 556 aaKnown RBP10.03□□□□□ -0.8
XCR1-201ENST00000309285 KRT15P19012 456 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 PLA2G4AP47712 749 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 NFIAQ12857 509 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 DYNC1I2Q13409 638 aaKnown RBP10.03□□□□□ -0.8
XCR1-201ENST00000309285 DPY19L2Q6NUT2 758 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 SCYL3Q8IZE3 742 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 STK17AQ9UEE5 414 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 KDM3AQ9Y4C1 1321 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 A0A087X0B3 334 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 MFAP3LO75121 409 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 PABPC4Q13310 644 aaKnown RBP eCLIP10.03□□□□□ -0.8
XCR1-201ENST00000309285 MTF1Q14872 753 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 CCDC14Q49A88 953 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 HSP90AA5PQ58FG0 334 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 MLXIPQ9HAP2 919 aa10.03□□□□□ -0.8
XCR1-201ENST00000309285 HEXIM1O94992 359 aaKnown RBP10.02□□□□□ -0.8
XCR1-201ENST00000309285 HOXA13P31271 388 aaPredicted RBP10.02□□□□□ -0.8
XCR1-201ENST00000309285 UBXN2AP68543 259 aa10.02□□□□□ -0.8
XCR1-201ENST00000309285 SLC20A2Q08357 652 aa10.02□□□□□ -0.8
XCR1-201ENST00000309285 ZNF543Q08ER8 600 aa10.02□□□□□ -0.8
XCR1-201ENST00000309285 ZC3H18Q86VM9 953 aaKnown RBP10.02□□□□□ -0.8
XCR1-201ENST00000309285 COL23A1Q86Y22 540 aaPredicted RBP10.02□□□□□ -0.8
XCR1-201ENST00000309285 CXorf38Q8TB03 319 aa10.02□□□□□ -0.8
XCR1-201ENST00000309285 PANX2Q96RD6 677 aa10.02□□□□□ -0.8
XCR1-201ENST00000309285 KRT12Q99456 494 aa10.02□□□□□ -0.8
XCR1-201ENST00000309285 CCSER1Q9C0I3 900 aa10.02□□□□□ -0.8
XCR1-201ENST00000309285 MYO1AQ9UBC5 1043 aa10.02□□□□□ -0.8
XCR1-201ENST00000309285 STRCP1A6NGW2 1772 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 F5H6K3 240 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 KCNK3O14649 394 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 MEFVO15553 781 aaPredicted RBP10.02□□□□□ -0.81
XCR1-201ENST00000309285 DKC1O60832 514 aaKnown RBP eCLIP10.02□□□□□ -0.81
XCR1-201ENST00000309285 CSPG5O95196 566 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 IL1R1P14778 569 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 CXCR5P32302 372 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 KLRC3Q07444 240 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 QRICH1Q2TAL8 776 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 MIGA2Q7L4E1 593 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 CHURC1Q8WUH1 139 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 HPS3Q969F9 1004 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 HVCN1Q96D96 273 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 NOVA2Q9UNW9 492 aaKnown RBP10.02□□□□□ -0.81
XCR1-201ENST00000309285 EXOC7Q9UPT5 735 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 CYTH3O43739 400 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 SKAP2O75563 359 aaPredicted RBP10.02□□□□□ -0.81
XCR1-201ENST00000309285 SRGNP10124 158 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 CD44P16070 742 aaKnown RBP10.02□□□□□ -0.81
XCR1-201ENST00000309285 INPP1P49441 399 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 FUT2Q10981 343 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 TMEM179Q6ZVK1 233 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 DYDC2Q96IM9 177 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 ASIC3Q9UHC3 531 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 TSKSQ9UJT2 592 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 ROBO1Q9Y6N7 1651 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.02□□□□□ -0.81
XCR1-201ENST00000309285 MEIS1O00470 390 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 GFAPP14136 432 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 BMP6P22004 513 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 IFRD2Q12894 506 aaPredicted RBP10.02□□□□□ -0.81
XCR1-201ENST00000309285 ANKRD35Q8N283 1001 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 GIMAP4Q9NUV9 329 aa10.02□□□□□ -0.81
XCR1-201ENST00000309285 A0A1B0GTH6 734 aa10.01□□□□□ -0.81
XCR1-201ENST00000309285 RASSF10A6NK89 507 aa10.01□□□□□ -0.81
XCR1-201ENST00000309285 M0QZ92 97 aa10.01□□□□□ -0.81
XCR1-201ENST00000309285 POLRMTO00411 1230 aaKnown RBP10.01□□□□□ -0.81
XCR1-201ENST00000309285 WNT7AO00755 349 aa10.01□□□□□ -0.81
XCR1-201ENST00000309285 SYF2O95926 243 aaKnown RBP10.01□□□□□ -0.81
XCR1-201ENST00000309285 FCER1AP12319 257 aa10.01□□□□□ -0.81
XCR1-201ENST00000309285 CYP2J2P51589 502 aa10.01□□□□□ -0.81
XCR1-201ENST00000309285 GABPAQ06546 454 aa10.01□□□□□ -0.81
XCR1-201ENST00000309285 ASIC2Q16515 512 aa10.01□□□□□ -0.81
XCR1-201ENST00000309285 GADL1Q6ZQY3 521 aa10.01□□□□□ -0.81
XCR1-201ENST00000309285 PACS2Q86VP3 889 aa10.01□□□□□ -0.81
XCR1-201ENST00000309285 ELOA2Q8IYF1 753 aaPredicted RBP10.01□□□□□ -0.81
XCR1-201ENST00000309285 SLFN12Q8IYM2 578 aa10.01□□□□□ -0.81
XCR1-201ENST00000309285 HOOK2Q96ED9 719 aa10.01□□□□□ -0.81
XCR1-201ENST00000309285 TRIM9Q9C026 710 aa10.01□□□□□ -0.81
XCR1-201ENST00000309285 POLD4Q9HCU8 107 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms