RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 ACRBPQ8NEB7 543 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 FRS2Q8WU20 508 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 COPS5Q92905 334 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 LENG1Q96BZ8 264 aaPredicted RBP9.23□□□□□ -0.93
CHD6-201ENST00000309279 FAM210AQ96ND0 272 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 MFRPQ9BY79 579 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 TGIF2Q9GZN2 237 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 AGO4Q9HCK5 861 aaKnown RBP9.23□□□□□ -0.93
CHD6-201ENST00000309279 CLIC5Q9NZA1 410 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 MTMR6Q9Y217 621 aa9.23□□□□□ -0.93
CHD6-201ENST00000309279 DHX15O43143 795 aaKnown RBP9.22□□□□□ -0.93
CHD6-201ENST00000309279 DYNC1LI2O43237 492 aaPredicted RBP9.22□□□□□ -0.93
CHD6-201ENST00000309279 CCNT1O60563 726 aaKnown RBP9.22□□□□□ -0.93
CHD6-201ENST00000309279 FARP2O94887 1054 aaPredicted RBP9.22□□□□□ -0.93
CHD6-201ENST00000309279 TDP2O95551 362 aa9.22□□□□□ -0.93
CHD6-201ENST00000309279 BPNT1O95861 308 aa9.22□□□□□ -0.93
CHD6-201ENST00000309279 PGK1P00558 417 aa9.22□□□□□ -0.93
CHD6-201ENST00000309279 GH1P01241 217 aa9.22□□□□□ -0.93
CHD6-201ENST00000309279 NAT2P11245 290 aa9.22□□□□□ -0.93
CHD6-201ENST00000309279 HOXD8P13378 290 aaPredicted RBP9.22□□□□□ -0.93
CHD6-201ENST00000309279 PTGS1P23219 599 aa9.22□□□□□ -0.93
CHD6-201ENST00000309279 CASQ1P31415 396 aa9.22□□□□□ -0.93
CHD6-201ENST00000309279 TOB1P50616 345 aaPredicted RBP9.22□□□□□ -0.93
CHD6-201ENST00000309279 FAM160A1Q05DH4 1040 aa9.22□□□□□ -0.93
CHD6-201ENST00000309279 ORC2Q13416 577 aaPredicted RBP9.22□□□□□ -0.93
CHD6-201ENST00000309279 LAMC2Q13753 1193 aa9.22□□□□□ -0.93
CHD6-201ENST00000309279 GNL2Q13823 731 aaKnown RBP9.22□□□□□ -0.93
CHD6-201ENST00000309279 LRRC41Q15345 812 aa9.22□□□□□ -0.93
CHD6-201ENST00000309279 LETM2Q2VYF4 491 aa9.22□□□□□ -0.93
CHD6-201ENST00000309279 PRR16Q569H4 304 aa9.22□□□□□ -0.93
CHD6-201ENST00000309279 MCTP1Q6DN14 999 aa9.22□□□□□ -0.93
CHD6-201ENST00000309279 METTL7BQ6UX53 244 aa9.22□□□□□ -0.93
CHD6-201ENST00000309279 TAS1R3Q7RTX0 852 aa9.22□□□□□ -0.93
CHD6-201ENST00000309279 BRAPQ7Z569 592 aa9.22□□□□□ -0.93
CHD6-201ENST00000309279 SUGP1Q8IWZ8 645 aaKnown RBP9.22□□□□□ -0.93
CHD6-201ENST00000309279 ACBD3Q9H3P7 528 aa9.22□□□□□ -0.93
CHD6-201ENST00000309279 BCAS3Q9H6U6 928 aa9.22□□□□□ -0.93
CHD6-201ENST00000309279 CCSER2Q9H7U1 834 aa9.22□□□□□ -0.93
CHD6-201ENST00000309279 ARNT2Q9HBZ2 717 aa9.22□□□□□ -0.93
CHD6-201ENST00000309279 TFIP11Q9UBB9 837 aaKnown RBP9.22□□□□□ -0.93
CHD6-201ENST00000309279 SSUH2Q9Y2M2 353 aa9.22□□□□□ -0.93
CHD6-201ENST00000309279 NFASCO94856 1347 aa9.22□□□□□ -0.93
CHD6-201ENST00000309279 VPS37CA5D8V6 355 aaPredicted RBP9.21□□□□□ -0.93
CHD6-201ENST00000309279 IPO5O00410 1097 aaKnown RBP9.21□□□□□ -0.93
CHD6-201ENST00000309279 DNM1LO00429 736 aa9.21□□□□□ -0.93
CHD6-201ENST00000309279 WNT7AO00755 349 aa9.21□□□□□ -0.93
CHD6-201ENST00000309279 MSH4O15457 936 aa9.21□□□□□ -0.93
CHD6-201ENST00000309279 SLC37A4O43826 429 aa9.21□□□□□ -0.93
CHD6-201ENST00000309279 GGPS1O95749 300 aa9.21□□□□□ -0.93
CHD6-201ENST00000309279 TFRCP02786 760 aaKnown RBP9.21□□□□□ -0.93
CHD6-201ENST00000309279 ITGB3BPQ13352 177 aaPredicted RBP9.21□□□□□ -0.93
CHD6-201ENST00000309279 COL19A1Q14993 1142 aa9.21□□□□□ -0.93
CHD6-201ENST00000309279 BRD3Q15059 726 aa9.21□□□□□ -0.93
CHD6-201ENST00000309279 FSCN1Q16658 493 aaKnown RBP9.21□□□□□ -0.93
CHD6-201ENST00000309279 HSDL1Q3SXM5 330 aa9.21□□□□□ -0.93
CHD6-201ENST00000309279 RILPL1Q5EBL4 403 aa9.21□□□□□ -0.93
CHD6-201ENST00000309279 GNASQ5JWF2 1037 aa9.21□□□□□ -0.93
CHD6-201ENST00000309279 CYFIP1Q7L576 1253 aa9.21□□□□□ -0.93
CHD6-201ENST00000309279 RNF180Q86T96 592 aa9.21□□□□□ -0.93
CHD6-201ENST00000309279 RELL1Q8IUW5 271 aa9.21□□□□□ -0.93
CHD6-201ENST00000309279 PPTC7Q8NI37 304 aa9.21□□□□□ -0.93
CHD6-201ENST00000309279 ETNPPLQ8TBG4 499 aa9.21□□□□□ -0.93
CHD6-201ENST00000309279 SLC5A5Q92911 643 aa9.21□□□□□ -0.93
CHD6-201ENST00000309279 UCN2Q96RP3 112 aa9.21□□□□□ -0.93
CHD6-201ENST00000309279 TSEN34Q9BSV6 310 aaKnown RBP9.21□□□□□ -0.93
CHD6-201ENST00000309279 AP5M1Q9H0R1 490 aa9.21□□□□□ -0.93
CHD6-201ENST00000309279 KCNMB3Q9NPA1 279 aa9.21□□□□□ -0.93
CHD6-201ENST00000309279 TBC1D22BQ9NU19 505 aa9.21□□□□□ -0.93
CHD6-201ENST00000309279 DDX25Q9UHL0 483 aaKnown RBP9.21□□□□□ -0.93
CHD6-201ENST00000309279 ZMIZ1Q9ULJ6 1067 aa9.21□□□□□ -0.93
CHD6-201ENST00000309279 MYADML2A6NDP7 307 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 PABPN1LA6NDY0 278 aaKnown RBP9.2□□□□□ -0.94
CHD6-201ENST00000309279 CCDC85CA6NKD9 419 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 PES1O00541 588 aaKnown RBP9.2□□□□□ -0.94
CHD6-201ENST00000309279 CAND2O75155 1236 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 C6orf222P0C671 652 aaPredicted RBP9.2□□□□□ -0.94
CHD6-201ENST00000309279 EN2P19622 333 aaPredicted RBP9.2□□□□□ -0.94
CHD6-201ENST00000309279 DDIT3P35638 169 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 CPT1AP50416 773 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 IRX5P78411 483 aaPredicted RBP9.2□□□□□ -0.94
CHD6-201ENST00000309279 IFT88Q13099 833 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 RESTQ13127 1097 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 KCNA10Q16322 511 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 TMEM259Q4ZIN3 620 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 INO80DQ53TQ3 878 aaPredicted RBP9.2□□□□□ -0.94
CHD6-201ENST00000309279 WDR81Q562E7 1941 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 UBE2Q1Q7Z7E8 422 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 FERMT3Q86UX7 667 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 NDUFAF2Q8N183 169 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 TEX19Q8NA77 164 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 PCSK9Q8NBP7 692 aaKnown RBP9.2□□□□□ -0.94
CHD6-201ENST00000309279 OR6J1Q8NGC5 347 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 STK32AQ8WU08 396 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 AFG1LQ8WV93 481 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 HAS1Q92839 578 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 FAM20AQ96MK3 541 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 RIT2Q99578 217 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 ZNF577Q9BSK1 485 aa9.2□□□□□ -0.94
CHD6-201ENST00000309279 ZSCAN16Q9H4T2 348 aaPredicted RBP9.2□□□□□ -0.94
CHD6-201ENST00000309279 MLXIPQ9HAP2 919 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms