RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 MYO3BQ8WXR4 1341 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 CTDNEP1O95476 244 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 FMR1Q06787 632 aaKnown RBP eCLIP10.68□□□□□ -0.7
TMOD3-201ENST00000308580 CCDC197Q8NCU1 140 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 HPS3Q969F9 1004 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 TRIM9Q9C026 710 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 PIM2Q9P1W9 311 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 ARHGAP42A6NI28 874 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 PPP1R2P3Q6NXS1 205 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 MARCH10Q8NA82 808 aaPredicted RBP10.68□□□□□ -0.7
TMOD3-201ENST00000308580 VCX3BQ9H321 246 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 ZNF277Q9NRM2 450 aaPredicted RBP10.68□□□□□ -0.7
TMOD3-201ENST00000308580 RNF146Q9NTX7 359 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 TBC1D22BQ9NU19 505 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 SUN1O94901 812 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 SNRNP48Q6IEG0 339 aaKnown RBP10.68□□□□□ -0.7
TMOD3-201ENST00000308580 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.68□□□□□ -0.7
TMOD3-201ENST00000308580 RNF10Q8N5U6 811 aaKnown RBP10.68□□□□□ -0.7
TMOD3-201ENST00000308580 MCPH1Q8NEM0 835 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 CDKL2Q92772 493 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 FEM1BQ9UK73 627 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 CCDC188H7C350 402 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 MCF2LO15068 1137 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 EXOC8Q8IYI6 725 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 HDAC6Q9UBN7 1215 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 RASGRF2O14827 1237 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 TMED2Q15363 201 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 CCDC38Q502W7 563 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 SLFN12LQ6IEE8 588 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 CC2D1AQ6P1N0 951 aaPredicted RBP10.68□□□□□ -0.7
TMOD3-201ENST00000308580 CCNYQ8ND76 341 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 KAZALD1Q96I82 304 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 WRNIP1Q96S55 665 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 TXNDC9O14530 226 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 SLMAPQ14BN4 828 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 ALS2CLQ60I27 953 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 ANKRD40Q6AI12 368 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 FAM193BQ96PV7 902 aaPredicted RBP10.68□□□□□ -0.7
TMOD3-201ENST00000308580 SNX25Q9H3E2 840 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 MTMR4Q9NYA4 1195 aa10.68□□□□□ -0.7
TMOD3-201ENST00000308580 IPO5O00410 1097 aaKnown RBP10.67□□□□□ -0.7
TMOD3-201ENST00000308580 NCK2O43639 380 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 NTSR2O95665 410 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 NR1D1P20393 614 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 IRX2Q9BZI1 471 aaPredicted RBP10.67□□□□□ -0.7
TMOD3-201ENST00000308580 CNOT8Q9UFF9 292 aaKnown RBP10.67□□□□□ -0.7
TMOD3-201ENST00000308580 SNX24Q9Y343 169 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 HIP1RO75146 1068 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 RSRC2Q7L4I2 434 aaKnown RBP10.67□□□□□ -0.7
TMOD3-201ENST00000308580 CCSER1Q9C0I3 900 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 HAUS2Q9NVX0 235 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 CAMSAP1Q5T5Y3 1602 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 IREB2P48200 963 aaKnown RBP10.67□□□□□ -0.7
TMOD3-201ENST00000308580 MKRN3Q13064 507 aaKnown RBP10.67□□□□□ -0.7
TMOD3-201ENST00000308580 SBK1Q52WX2 424 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 NFRKBQ6P4R8 1299 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 GJD4Q96KN9 370 aaPredicted RBP10.67□□□□□ -0.7
TMOD3-201ENST00000308580 KCNF1Q9H3M0 494 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 EFCC1Q9HA90 598 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 MED7O43513 233 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 ACTN1P12814 892 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 KRT76Q01546 638 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 DMTNQ08495 405 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 KCNB1Q14721 858 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 PRR5LQ6MZQ0 368 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 SCYL1Q96KG9 808 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 WDR24Q96S15 920 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 ADAM22Q9P0K1 906 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 TRIM49P0CI25 452 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 TRIM49CP0CI26 452 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 QARSP47897 775 aaKnown RBP10.67□□□□□ -0.7
TMOD3-201ENST00000308580 NXNQ6DKJ4 435 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 AP5M1Q9H0R1 490 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 RPF1Q9H9Y2 349 aaKnown RBP10.67□□□□□ -0.7
TMOD3-201ENST00000308580 ATP6V0A4Q9HBG4 840 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 ANAPC7Q9UJX3 599 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 TACC3Q9Y6A5 838 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 FLT1P17948 1338 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 DIP2CQ9Y2E4 1556 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 A0A1W2PQC6 194 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 EIF3CLB5ME19 914 aaKnown RBP10.67□□□□□ -0.7
TMOD3-201ENST00000308580 P4HBP07237 508 aaKnown RBP10.67□□□□□ -0.7
TMOD3-201ENST00000308580 USP11P51784 963 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 ITPK1Q13572 414 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 BBS9Q3SYG4 887 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 PRPF38AQ8NAV1 312 aaKnown RBP10.67□□□□□ -0.7
TMOD3-201ENST00000308580 EIF3CQ99613 913 aaKnown RBP10.67□□□□□ -0.7
TMOD3-201ENST00000308580 DDX23Q9BUQ8 820 aaKnown RBP10.67□□□□□ -0.7
TMOD3-201ENST00000308580 IFT122Q9HBG6 1241 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 RRP15Q9Y3B9 282 aaKnown RBP10.67□□□□□ -0.7
TMOD3-201ENST00000308580 DENND3A2RUS2 1198 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 DARS2Q6PI48 645 aaKnown RBP10.67□□□□□ -0.7
TMOD3-201ENST00000308580 KCTD6Q8NC69 237 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 NSUN6Q8TEA1 469 aaKnown RBP10.67□□□□□ -0.7
TMOD3-201ENST00000308580 HEXIM2Q96MH2 286 aaKnown RBP10.67□□□□□ -0.7
TMOD3-201ENST00000308580 LXNQ9BS40 222 aa10.67□□□□□ -0.7
TMOD3-201ENST00000308580 NOL3O60936 208 aaKnown RBP10.66□□□□□ -0.7
TMOD3-201ENST00000308580 CUL1Q13616 776 aa10.66□□□□□ -0.7
TMOD3-201ENST00000308580 NAALADL2Q58DX5 795 aa10.66□□□□□ -0.7
TMOD3-201ENST00000308580 SLC27A3Q5K4L6 730 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms