RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 KCNK9Q9NPC2 374 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 LEMD3Q9Y2U8 911 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 PHLPP1O60346 1717 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 CFAP73A6NFT4 308 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 DNAJC8O75937 253 aaPredicted RBP11.34□□□□□ -0.59
MSRB3-201ENST00000308259 TMCC1O94876 653 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 ZFXP17010 805 aaPredicted RBP11.34□□□□□ -0.59
MSRB3-201ENST00000308259 TNNI2P48788 182 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 SLC35G1Q2M3R5 365 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 LETM2Q2VYF4 491 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 P3H1Q32P28 736 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 DTHD1Q6ZMT9 781 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 IL17RBQ9NRM6 502 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 TARSL2A2RTX5 802 aaKnown RBP11.33□□□□□ -0.6
MSRB3-201ENST00000308259 RGL2O15211 777 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 SKIP12755 728 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 RFC1P35251 1148 aaPredicted RBP11.33□□□□□ -0.6
MSRB3-201ENST00000308259 MAGOHP61326 146 aaKnown RBP11.33□□□□□ -0.6
MSRB3-201ENST00000308259 HERVK_113P62684 666 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 BLMHQ13867 455 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 MB21D1Q8N884 522 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 TBC1D5Q92609 795 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 MAGOHBQ96A72 148 aaKnown RBP11.33□□□□□ -0.6
MSRB3-201ENST00000308259 CLMNQ96JQ2 1002 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 NDNQ99608 321 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 OSBPL7Q9BZF2 842 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 MKNK2Q9HBH9 465 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 DISC1Q9NRI5 854 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 CHD4Q14839 1912 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.33□□□□□ -0.6
MSRB3-201ENST00000308259 PLSCR1O15162 318 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 LDHBP07195 334 aaKnown RBP11.33□□□□□ -0.6
MSRB3-201ENST00000308259 KCNA3P22001 575 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 KDM7AQ6ZMT4 941 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 LCA5Q86VQ0 697 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 STMN2Q93045 179 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 LRRC45Q96CN5 670 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 BRIP1Q9BX63 1249 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 MYH3P11055 1940 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 AGPSO00116 658 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 DDAH1O94760 285 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 DPY19L2Q6NUT2 758 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 WDR59Q6PJI9 974 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 CSGALNACT2Q8N6G5 542 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 MASTLQ96GX5 879 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 SERPINA10Q9UK55 444 aa11.33□□□□□ -0.6
MSRB3-201ENST00000308259 CICQ96RK0 1608 aaPredicted RBP11.32□□□□□ -0.6
MSRB3-201ENST00000308259 CALM1P0DP23 149 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 CALM2P0DP24 149 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 CALM3P0DP25 149 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 SETDB1Q15047 1291 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 TBC1D9BQ66K14 1250 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 C4orf32Q8N8J7 132 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 TSEN2Q8NCE0 465 aaKnown RBP11.32□□□□□ -0.6
MSRB3-201ENST00000308259 HDAC7Q8WUI4 952 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 KRT12Q99456 494 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 MOV10L1Q9BXT6 1211 aaKnown RBP11.32□□□□□ -0.6
MSRB3-201ENST00000308259 CARD9Q9H257 536 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 FAF1Q9UNN5 650 aaPredicted RBP11.32□□□□□ -0.6
MSRB3-201ENST00000308259 ATF5Q9Y2D1 282 aaPredicted RBP11.32□□□□□ -0.6
MSRB3-201ENST00000308259 SLC4A7Q9Y6M7 1214 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 FAM170AA1A519 330 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 CYTH3O43739 400 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 BMP15O95972 392 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 MSH2P43246 934 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 NUGGCQ68CJ6 796 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 MAPKAPK5Q8IW41 473 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 FAM81BQ96LP2 452 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.32□□□□□ -0.6
MSRB3-201ENST00000308259 TSC22D4Q9Y3Q8 395 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 ZNF804BA4D1E1 1349 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 MYH6P13533 1939 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 ZSCAN9O15535 394 aaPredicted RBP11.32□□□□□ -0.6
MSRB3-201ENST00000308259 CCNT1O60563 726 aaKnown RBP11.32□□□□□ -0.6
MSRB3-201ENST00000308259 E2F6O75461 281 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 PLCG1P19174 1290 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 VCAM1P19320 739 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 TECP42680 631 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 STK4Q13043 487 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 SLC15A2Q16348 729 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 DALRD3Q5D0E6 543 aaKnown RBP11.32□□□□□ -0.6
MSRB3-201ENST00000308259 FAM228AQ86W67 206 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 RTKN2Q8IZC4 609 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 ZNF444Q8N0Y2 327 aaPredicted RBP11.32□□□□□ -0.6
MSRB3-201ENST00000308259 ADSSL1Q8N142 457 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 TTLL6Q8N841 843 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 PHC3Q8NDX5 983 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 SH3RF3Q8TEJ3 882 aaPredicted RBP11.32□□□□□ -0.6
MSRB3-201ENST00000308259 TGFBRAP1Q8WUH2 860 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 P3H4Q92791 437 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 GJA10Q969M2 543 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 ZNF570Q96NI8 536 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 NR1H4Q96RI1 486 aaPredicted RBP11.32□□□□□ -0.6
MSRB3-201ENST00000308259 PFDN4Q9NQP4 134 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 INTS9Q9NV88 658 aaKnown RBP11.32□□□□□ -0.6
MSRB3-201ENST00000308259 EHD2Q9NZN4 543 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 RIMBP2O15034 1052 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 PPIP5K2O43314 1243 aa11.32□□□□□ -0.6
MSRB3-201ENST00000308259 VIL1P09327 827 aaKnown RBP11.32□□□□□ -0.6
MSRB3-201ENST00000308259 MTIF2P46199 727 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms