RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 POTEBQ6S5H4 581 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 POTEGQ6S5H5 508 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 POTEEQ6S8J3 1075 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 CPLX4Q7Z7G2 160 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 GDAP1Q8TB36 358 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 TRPC7Q9HCX4 862 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 MAN1B1Q9UKM7 699 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 PRPSAP2O60256 369 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 CSF1RP07333 972 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 KRT15P19012 456 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 YWHABP31946 246 aaKnown RBP11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 HPDP32754 393 aaPredicted RBP11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 DYNLT1P63172 113 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 TTC1Q99614 292 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 RAB17Q9H0T7 212 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 ALX1Q15699 326 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 C16orf86Q6ZW13 317 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 CCDC51Q96ER9 411 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 CPA4Q9UI42 421 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 TNS2Q63HR2 1409 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 ARHGAP6O43182 974 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 SRGNP10124 158 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 TPD52P55327 224 aaPredicted RBP11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 NBPF9Q3BBW0 867 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 HS1BP3Q53T59 392 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 FBXO33Q7Z6M2 555 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 S100BP04271 92 aaPredicted RBP11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 PHBP35232 272 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 CAPN12Q6ZSI9 719 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 RNF149Q8NC42 400 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 NEK9Q8TD19 979 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 PRMT6Q96LA8 375 aaPredicted RBP11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 HPCAL4Q9UM19 191 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 TICAM2Q86XR7 235 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 ERO1BQ86YB8 467 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 HSPH1Q92598 858 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 GLT1D1Q96MS3 346 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 MAN2A1Q16706 1144 aa11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 RABL6Q3YEC7 729 aaPredicted RBP11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 CC2D1AQ6P1N0 951 aaPredicted RBP11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 CALN1Q9BXU9 219 aa11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 PTPN22Q9Y2R2 807 aa11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 RPS6KA5O75582 802 aa11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 VIMP08670 466 aaKnown RBP11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 H2AFZP0C0S5 128 aa11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 KLRK1P26718 216 aa11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 H2AFVQ71UI9 128 aa11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 PGBD4Q96DM1 585 aa11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 PAGE5Q96GU1 130 aa11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 FYB2Q5VWT5 728 aa11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 TDRD7Q8NHU6 1098 aaKnown RBP11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 ACAP3Q96P50 834 aa11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 KIAA1586Q9HCI6 787 aa11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 PRR12Q9ULL5 1215 aa11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 NEMP1O14524 444 aa11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 NNMTP40261 264 aa11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 PAK2Q13177 524 aa11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 PKP1Q13835 747 aa11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 DENND2CQ68D51 928 aa11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 TRIM58Q8NG06 486 aa11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 GJB4Q9NTQ9 266 aa11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 PCDHA5Q9Y5H7 936 aa11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 PLEKHH3Q7Z736 793 aa11.56□□□□□ -0.56
SYNPO2-201ENST00000307142 GRIK1P39086 918 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 ATN1P54259 1190 aaPredicted RBP11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 EVCP57679 992 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 PPARDQ03181 441 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 ACCSLQ4AC99 568 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 FAM133AQ8N9E0 248 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 MRPL47Q9HD33 250 aaKnown RBP11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 ABCF3Q9NUQ8 709 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 ZKSCAN5Q9Y2L8 839 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 CHST13Q8NET6 341 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 ARHGEF28Q8N1W1 1705 aaKnown RBP11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 SPDYE2BA6NHP3 402 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 E9PMD0 336 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 SLFN14P0C7P3 912 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 SPDYE6P0CI01 402 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 HHATQ5VTY9 493 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 ERICH1Q86X53 443 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 EFCAB13Q8IY85 973 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 NDUFAF2Q8N183 169 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 I3L4J1 428 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 NFKBIAP25963 317 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 USP11P51784 963 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 ZNF543Q08ER8 600 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 SFR1Q86XK3 245 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 RAD54LQ92698 747 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 FAM217BQ9NTX9 383 aaPredicted RBP11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 GSTA1P08263 222 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 GSTA2P09210 222 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 GTF2F1P35269 517 aaKnown RBP eCLIP11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 TUBB2AQ13885 445 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 PPP4R3CPQ6ZMV5 832 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 DNAAF3Q8N9W5 541 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 TUBB2BQ9BVA1 445 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 COL5A2P05997 1499 aaPredicted RBP11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 A0A1W2PQ27 194 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 A0A1W2PQ64 194 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms