RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 GJB5O95377 273 aa18.05■□□□□ 0.48
SRGAP2C-201ENST00000304465 GNL2Q13823 731 aaKnown RBP18.05■□□□□ 0.48
SRGAP2C-201ENST00000304465 NONOQ15233 471 aaKnown RBP eCLIP18.05■□□□□ 0.48
SRGAP2C-201ENST00000304465 PTPAQ15257 358 aa18.05■□□□□ 0.48
SRGAP2C-201ENST00000304465 TCTN1Q2MV58 587 aa18.05■□□□□ 0.48
SRGAP2C-201ENST00000304465 MARCH8Q5T0T0 291 aa18.05■□□□□ 0.48
SRGAP2C-201ENST00000304465 IER5Q5VY09 327 aa18.05■□□□□ 0.48
SRGAP2C-201ENST00000304465 FAM117BQ6P1L5 589 aa18.05■□□□□ 0.48
SRGAP2C-201ENST00000304465 TMCO2Q7Z6W1 182 aaPredicted RBP18.05■□□□□ 0.48
SRGAP2C-201ENST00000304465 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.05■□□□□ 0.48
SRGAP2C-201ENST00000304465 MYOCDQ8IZQ8 938 aa18.05■□□□□ 0.48
SRGAP2C-201ENST00000304465 TET1Q8NFU7 2136 aa18.05■□□□□ 0.48
SRGAP2C-201ENST00000304465 GPT2Q8TD30 523 aa18.05■□□□□ 0.48
SRGAP2C-201ENST00000304465 RAD9AQ99638 391 aa18.05■□□□□ 0.48
SRGAP2C-201ENST00000304465 PCDHA10Q9Y5I2 948 aa18.05■□□□□ 0.48
SRGAP2C-201ENST00000304465 TRAK2O60296 914 aa18.04■□□□□ 0.48
SRGAP2C-201ENST00000304465 GAS7O60861 476 aa18.04■□□□□ 0.48
SRGAP2C-201ENST00000304465 GHRP10912 638 aa18.04■□□□□ 0.48
SRGAP2C-201ENST00000304465 PTMSP20962 102 aa18.04■□□□□ 0.48
SRGAP2C-201ENST00000304465 CEBPZQ03701 1054 aaKnown RBP18.04■□□□□ 0.48
SRGAP2C-201ENST00000304465 KRT25Q7Z3Z0 450 aa18.04■□□□□ 0.48
SRGAP2C-201ENST00000304465 CCDC60Q8IWA6 550 aaPredicted RBP18.04■□□□□ 0.48
SRGAP2C-201ENST00000304465 LINC00301Q8NCQ3 95 aa18.04■□□□□ 0.48
SRGAP2C-201ENST00000304465 ATP8B4Q8TF62 1192 aa18.04■□□□□ 0.48
SRGAP2C-201ENST00000304465 PPM1EQ8WY54 764 aa18.04■□□□□ 0.48
SRGAP2C-201ENST00000304465 SPATA32Q96LK8 384 aa18.04■□□□□ 0.48
SRGAP2C-201ENST00000304465 CERS4Q9HA82 394 aa18.04■□□□□ 0.48
SRGAP2C-201ENST00000304465 BRMS1Q9HCU9 246 aa18.04■□□□□ 0.48
SRGAP2C-201ENST00000304465 PCDHA2Q9Y5H9 948 aa18.04■□□□□ 0.48
SRGAP2C-201ENST00000304465 CCDC194A0A1B0GVG4 234 aa18.03■□□□□ 0.48
SRGAP2C-201ENST00000304465 WDR64B1ANS9 1081 aa18.03■□□□□ 0.48
SRGAP2C-201ENST00000304465 YEATS4O95619 227 aa18.03■□□□□ 0.48
SRGAP2C-201ENST00000304465 CHRNA1P02708 482 aa18.03■□□□□ 0.48
SRGAP2C-201ENST00000304465 MRPS6P82932 125 aaKnown RBP18.03■□□□□ 0.48
SRGAP2C-201ENST00000304465 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.03■□□□□ 0.48
SRGAP2C-201ENST00000304465 TRAPPC12Q8WVT3 735 aa18.03■□□□□ 0.48
SRGAP2C-201ENST00000304465 ARNTL2Q8WYA1 636 aa18.03■□□□□ 0.48
SRGAP2C-201ENST00000304465 RIT2Q99578 217 aa18.03■□□□□ 0.48
SRGAP2C-201ENST00000304465 TEKT3Q9BXF9 490 aa18.03■□□□□ 0.48
SRGAP2C-201ENST00000304465 CDY2AQ9Y6F7 541 aa18.03■□□□□ 0.48
SRGAP2C-201ENST00000304465 KAT6AQ92794 2004 aa18.03■□□□□ 0.48
SRGAP2C-201ENST00000304465 MSH4O15457 936 aa18.02■□□□□ 0.48
SRGAP2C-201ENST00000304465 GTPBP6O43824 516 aaPredicted RBP18.02■□□□□ 0.48
SRGAP2C-201ENST00000304465 TAP1Q03518 808 aa18.02■□□□□ 0.48
SRGAP2C-201ENST00000304465 RILPL1Q5EBL4 403 aa18.02■□□□□ 0.48
SRGAP2C-201ENST00000304465 ZNF484Q5JVG2 852 aa18.02■□□□□ 0.48
SRGAP2C-201ENST00000304465 LRCH2Q5VUJ6 765 aa18.02■□□□□ 0.48
SRGAP2C-201ENST00000304465 TRMT1LQ7Z2T5 733 aaKnown RBP18.02■□□□□ 0.48
SRGAP2C-201ENST00000304465 LENG9Q96B70 501 aa18.02■□□□□ 0.48
SRGAP2C-201ENST00000304465 ZBTB10Q96DT7 871 aa18.02■□□□□ 0.48
SRGAP2C-201ENST00000304465 GABBR1Q9UBS5 961 aa18.02■□□□□ 0.48
SRGAP2C-201ENST00000304465 INSL6Q9Y581 213 aa18.02■□□□□ 0.48
SRGAP2C-201ENST00000304465 COL6A3P12111 3177 aa18.02■□□□□ 0.48
SRGAP2C-201ENST00000304465 COL1A2P08123 1366 aa18.02■□□□□ 0.48
SRGAP2C-201ENST00000304465 SMIM35A0A1B0GVV1 85 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 KLRC1P26715 233 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 SLC39A14Q15043 492 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 SF3A1Q15459 793 aaKnown RBP18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 CSPP1Q1MSJ5 1256 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 Q4G0T1 1027 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 MTHFD1LQ6UB35 978 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 PIK3AP1Q6ZUJ8 805 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 NME8Q8N427 588 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 BBXQ8WY36 941 aaPredicted RBP18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 FAM167AQ96KS9 214 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 DISC1Q9NRI5 854 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 CEP131Q9UPN4 1083 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 PCDHB6Q9Y5E3 794 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 TRPV2Q9Y5S1 764 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 GBF1Q92538 1859 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 CHMP2AO43633 222 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 EDIL3O43854 480 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 UPP2O95045 317 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 SFNP31947 248 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 JAK3P52333 1124 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 UBE2HP62256 183 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 MGAT3Q09327 533 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 ADGRE1Q14246 886 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 LPIN1Q14693 890 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 INF2Q27J81 1249 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 KLHL40Q2TBA0 621 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 LETM2Q2VYF4 491 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 TSHZ1Q6ZSZ6 1077 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 MICALL1Q8N3F8 863 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 USP38Q8NB14 1042 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 YME1L1Q96TA2 773 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 OSBPL7Q9BZF2 842 aa18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 MAFBQ9Y5Q3 323 aaPredicted RBP18.01■□□□□ 0.47
SRGAP2C-201ENST00000304465 CYP3A7-CYP3A51PA0A087WV96 503 aa18■□□□□ 0.47
SRGAP2C-201ENST00000304465 LCHNA4D1U4 455 aa18■□□□□ 0.47
SRGAP2C-201ENST00000304465 TDP2O95551 362 aa18■□□□□ 0.47
SRGAP2C-201ENST00000304465 CYP3A7P24462 503 aa18■□□□□ 0.47
SRGAP2C-201ENST00000304465 TRAPPC10P48553 1259 aa18■□□□□ 0.47
SRGAP2C-201ENST00000304465 TMEM62Q0P6H9 643 aa18■□□□□ 0.47
SRGAP2C-201ENST00000304465 CCDC85BQ15834 202 aaPredicted RBP18■□□□□ 0.47
SRGAP2C-201ENST00000304465 SKOR2Q2VWA4 1001 aaPredicted RBP18■□□□□ 0.47
SRGAP2C-201ENST00000304465 FBXO47Q5MNV8 452 aa18■□□□□ 0.47
SRGAP2C-201ENST00000304465 MOXD1Q6UVY6 613 aa18■□□□□ 0.47
SRGAP2C-201ENST00000304465 SLC5A5Q92911 643 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms