RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 SLC26A4O43511 780 aa27.35■■□□□ 1.97
HOXC9-201ENST00000303450 CD4P01730 458 aa27.35■■□□□ 1.97
HOXC9-201ENST00000303450 AXDND1Q5T1B0 1012 aaPredicted RBP27.35■■□□□ 1.97
HOXC9-201ENST00000303450 USP49Q70CQ1 688 aa27.35■■□□□ 1.97
HOXC9-201ENST00000303450 DPF3Q92784 378 aa27.35■■□□□ 1.97
HOXC9-201ENST00000303450 SH2D3AQ9BRG2 576 aa27.35■■□□□ 1.97
HOXC9-201ENST00000303450 CCSER1Q9C0I3 900 aa27.35■■□□□ 1.97
HOXC9-201ENST00000303450 ANKEF1Q9NU02 776 aa27.35■■□□□ 1.97
HOXC9-201ENST00000303450 TUBE1Q9UJT0 475 aa27.35■■□□□ 1.97
HOXC9-201ENST00000303450 XRCC6P12956 609 aaKnown RBP eCLIP27.34■■□□□ 1.97
HOXC9-201ENST00000303450 ADAM17P78536 824 aa27.34■■□□□ 1.97
HOXC9-201ENST00000303450 XKR9Q5GH70 373 aa27.34■■□□□ 1.97
HOXC9-201ENST00000303450 HYIQ5T013 277 aa27.34■■□□□ 1.97
HOXC9-201ENST00000303450 MARCH8Q5T0T0 291 aa27.34■■□□□ 1.97
HOXC9-201ENST00000303450 CEP170P1Q96L14 293 aa27.34■■□□□ 1.97
HOXC9-201ENST00000303450 CYP26B1Q9NR63 512 aa27.34■■□□□ 1.97
HOXC9-201ENST00000303450 ALPK3Q96L96 1907 aa27.34■■□□□ 1.97
HOXC9-201ENST00000303450 EVI5O60447 810 aa27.33■■□□□ 1.97
HOXC9-201ENST00000303450 RGS19P49795 217 aa27.33■■□□□ 1.97
HOXC9-201ENST00000303450 NPEPPSP55786 919 aa27.33■■□□□ 1.97
HOXC9-201ENST00000303450 FAAP100Q0VG06 881 aa27.33■■□□□ 1.97
HOXC9-201ENST00000303450 PLIN2Q99541 437 aa27.33■■□□□ 1.97
HOXC9-201ENST00000303450 CCDC39Q9UFE4 941 aa27.33■■□□□ 1.97
HOXC9-201ENST00000303450 DNM3Q9UQ16 869 aa27.33■■□□□ 1.97
HOXC9-201ENST00000303450 MBLAC1A4D2B0 266 aaPredicted RBP27.32■■□□□ 1.96
HOXC9-201ENST00000303450 CLTBP09497 229 aa27.32■■□□□ 1.96
HOXC9-201ENST00000303450 KLRC1P26715 233 aa27.32■■□□□ 1.96
HOXC9-201ENST00000303450 TBC1D8BQ0IIM8 1120 aa27.32■■□□□ 1.96
HOXC9-201ENST00000303450 GRB10Q13322 594 aa27.32■■□□□ 1.96
HOXC9-201ENST00000303450 KARSQ15046 597 aaKnown RBP27.32■■□□□ 1.96
HOXC9-201ENST00000303450 TARBP2Q15633 366 aaKnown RBP27.32■■□□□ 1.96
HOXC9-201ENST00000303450 MTHFD1LQ6UB35 978 aa27.32■■□□□ 1.96
HOXC9-201ENST00000303450 KCTD17Q8N5Z5 321 aa27.32■■□□□ 1.96
HOXC9-201ENST00000303450 PNMA5Q96PV4 448 aa27.32■■□□□ 1.96
HOXC9-201ENST00000303450 ADALQ6DHV7 355 aa27.31■■□□□ 1.96
HOXC9-201ENST00000303450 SHC4Q6S5L8 630 aa27.31■■□□□ 1.96
HOXC9-201ENST00000303450 C7orf61Q8IZ16 206 aa27.31■■□□□ 1.96
HOXC9-201ENST00000303450 ZBTB10Q96DT7 871 aa27.31■■□□□ 1.96
HOXC9-201ENST00000303450 CTAGE1Q96RT6 745 aa27.31■■□□□ 1.96
HOXC9-201ENST00000303450 DBR1Q9UK59 544 aaKnown RBP27.31■■□□□ 1.96
HOXC9-201ENST00000303450 PPME1Q9Y570 386 aa27.31■■□□□ 1.96
HOXC9-201ENST00000303450 MAGEB2O15479 319 aa27.31■■□□□ 1.96
HOXC9-201ENST00000303450 CYP2C9P11712 490 aa27.31■■□□□ 1.96
HOXC9-201ENST00000303450 PTK7Q13308 1070 aa27.31■■□□□ 1.96
HOXC9-201ENST00000303450 CSPP1Q1MSJ5 1256 aa27.31■■□□□ 1.96
HOXC9-201ENST00000303450 TMEM119Q4V9L6 283 aa27.31■■□□□ 1.96
HOXC9-201ENST00000303450 SERINC5Q86VE9 423 aa27.31■■□□□ 1.96
HOXC9-201ENST00000303450 PRDM5Q9NQX1 630 aaPredicted RBP27.31■■□□□ 1.96
HOXC9-201ENST00000303450 TMEM39AQ9NV64 488 aa27.31■■□□□ 1.96
HOXC9-201ENST00000303450 E9PMD0 336 aa27.3■■□□□ 1.96
HOXC9-201ENST00000303450 C22orf31O95567 290 aa27.3■■□□□ 1.96
HOXC9-201ENST00000303450 RARRES1P49788 294 aa27.3■■□□□ 1.96
HOXC9-201ENST00000303450 FAM13BQ9NYF5 915 aa27.3■■□□□ 1.96
HOXC9-201ENST00000303450 PCDHA2Q9Y5H9 948 aa27.3■■□□□ 1.96
HOXC9-201ENST00000303450 PLCG1P19174 1290 aa27.29■■□□□ 1.96
HOXC9-201ENST00000303450 TPRNQ4KMQ1 711 aa27.29■■□□□ 1.96
HOXC9-201ENST00000303450 TAF2Q6P1X5 1199 aa27.29■■□□□ 1.96
HOXC9-201ENST00000303450 METTL13Q8N6R0 699 aa27.29■■□□□ 1.96
HOXC9-201ENST00000303450 RETREG2Q8NC44 543 aa27.29■■□□□ 1.96
HOXC9-201ENST00000303450 CEP89Q96ST8 783 aa27.29■■□□□ 1.96
HOXC9-201ENST00000303450 BHMT2Q9H2M3 363 aa27.29■■□□□ 1.96
HOXC9-201ENST00000303450 ARHGEF35A5YM69 484 aa27.28■■□□□ 1.96
HOXC9-201ENST00000303450 EYA4O95677 639 aa27.28■■□□□ 1.96
HOXC9-201ENST00000303450 POLGP54098 1239 aaPredicted RBP27.28■■□□□ 1.96
HOXC9-201ENST00000303450 RRAGBQ5VZM2 374 aa27.28■■□□□ 1.96
HOXC9-201ENST00000303450 RESP18Q5W5W9 173 aa27.28■■□□□ 1.96
HOXC9-201ENST00000303450 RUFY4Q6ZNE9 571 aa27.28■■□□□ 1.96
HOXC9-201ENST00000303450 KCNK18Q7Z418 384 aa27.28■■□□□ 1.96
HOXC9-201ENST00000303450 EXOC8Q8IYI6 725 aa27.28■■□□□ 1.96
HOXC9-201ENST00000303450 SLC7A3Q8WY07 619 aa27.28■■□□□ 1.96
HOXC9-201ENST00000303450 JPH2Q9BR39 696 aaPredicted RBP27.28■■□□□ 1.96
HOXC9-201ENST00000303450 PANK2Q9BZ23 570 aa27.28■■□□□ 1.96
HOXC9-201ENST00000303450 SUGCTQ9HAC7 445 aa27.28■■□□□ 1.96
HOXC9-201ENST00000303450 PDLIM7Q9NR12 457 aa27.28■■□□□ 1.96
HOXC9-201ENST00000303450 PRKAG2Q9UGJ0 569 aa27.28■■□□□ 1.96
HOXC9-201ENST00000303450 EVPLQ92817 2033 aa27.28■■□□□ 1.96
HOXC9-201ENST00000303450 LOXHD1Q8IVV2 1947 aa27.27■■□□□ 1.96
HOXC9-201ENST00000303450 GOLGA6L4A6NEF3 574 aa27.27■■□□□ 1.96
HOXC9-201ENST00000303450 RFC5P40937 340 aa27.27■■□□□ 1.96
HOXC9-201ENST00000303450 EFCAB12Q6NXP0 572 aa27.27■■□□□ 1.96
HOXC9-201ENST00000303450 CCDC73Q6ZRK6 1079 aa27.27■■□□□ 1.96
HOXC9-201ENST00000303450 CCDC155Q8N6L0 562 aa27.27■■□□□ 1.96
HOXC9-201ENST00000303450 TBX21Q9UL17 535 aa27.27■■□□□ 1.96
HOXC9-201ENST00000303450 ARID2Q68CP9 1835 aa27.27■■□□□ 1.96
HOXC9-201ENST00000303450 SMIM35A0A1B0GVV1 85 aa27.26■■□□□ 1.96
HOXC9-201ENST00000303450 MAFO75444 373 aaPredicted RBP27.26■■□□□ 1.96
HOXC9-201ENST00000303450 CMA1P23946 247 aa27.26■■□□□ 1.96
HOXC9-201ENST00000303450 TMOD1P28289 359 aa27.26■■□□□ 1.96
HOXC9-201ENST00000303450 SH3RF1Q7Z6J0 888 aa27.26■■□□□ 1.96
HOXC9-201ENST00000303450 PDILTQ8N807 584 aa27.26■■□□□ 1.96
HOXC9-201ENST00000303450 FAM49AQ9H0Q0 323 aaPredicted RBP27.26■■□□□ 1.96
HOXC9-201ENST00000303450 DHX33Q9H6R0 707 aaKnown RBP27.26■■□□□ 1.96
HOXC9-201ENST00000303450 DGAT1O75907 488 aa27.26■■□□□ 1.95
HOXC9-201ENST00000303450 SSBP05455 408 aaKnown RBP eCLIP27.26■■□□□ 1.95
HOXC9-201ENST00000303450 BFSP2Q13515 415 aa27.26■■□□□ 1.95
HOXC9-201ENST00000303450 RSPH3Q86UC2 560 aa27.26■■□□□ 1.95
HOXC9-201ENST00000303450 LRRC71Q8N4P6 559 aa27.26■■□□□ 1.95
HOXC9-201ENST00000303450 CAGE1Q8TC20 777 aa27.26■■□□□ 1.95
HOXC9-201ENST00000303450 DHX38Q92620 1227 aaKnown RBP27.26■■□□□ 1.95
HOXC9-201ENST00000303450 WNT8BQ93098 351 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms