RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 RGS16O15492 202 aaPredicted RBP15.28■□□□□ 0.04
SDC2-201ENST00000302190 ABCB5Q2M3G0 1257 aa15.28■□□□□ 0.04
SDC2-201ENST00000302190 DENND2CQ68D51 928 aa15.28■□□□□ 0.04
SDC2-201ENST00000302190 ZIM3Q96PE6 472 aa15.28■□□□□ 0.04
SDC2-201ENST00000302190 DNAJC7Q99615 494 aa15.28■□□□□ 0.04
SDC2-201ENST00000302190 CELF4Q9BZC1 486 aaKnown RBP15.28■□□□□ 0.04
SDC2-201ENST00000302190 PLAGL2Q9UPG8 496 aa15.28■□□□□ 0.04
SDC2-201ENST00000302190 BCORQ6W2J9 1755 aa15.28■□□□□ 0.04
SDC2-201ENST00000302190 H0YIN7 160 aa15.28■□□□□ 0.04
SDC2-201ENST00000302190 GH2P01242 217 aa15.28■□□□□ 0.04
SDC2-201ENST00000302190 NMT1P30419 496 aaKnown RBP15.28■□□□□ 0.04
SDC2-201ENST00000302190 ARHGAP4P98171 946 aa15.28■□□□□ 0.04
SDC2-201ENST00000302190 EMBQ6PCB8 327 aa15.28■□□□□ 0.04
SDC2-201ENST00000302190 ANKS4BQ8N8V4 417 aa15.28■□□□□ 0.04
SDC2-201ENST00000302190 THOC1Q96FV9 657 aaKnown RBP15.28■□□□□ 0.04
SDC2-201ENST00000302190 CSRNP1Q96S65 589 aa15.28■□□□□ 0.04
SDC2-201ENST00000302190 MTMR4Q9NYA4 1195 aa15.28■□□□□ 0.04
SDC2-201ENST00000302190 TMOD4Q9NZQ9 345 aa15.28■□□□□ 0.04
SDC2-201ENST00000302190 TBK1Q9UHD2 729 aa15.28■□□□□ 0.04
SDC2-201ENST00000302190 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.28■□□□□ 0.04
SDC2-201ENST00000302190 ZBTB5O15062 677 aa15.27■□□□□ 0.04
SDC2-201ENST00000302190 CTNND1O60716 968 aaKnown RBP15.27■□□□□ 0.04
SDC2-201ENST00000302190 STK38LQ9Y2H1 464 aa15.27■□□□□ 0.04
SDC2-201ENST00000302190 COL1A1P02452 1464 aaPredicted RBP15.27■□□□□ 0.04
SDC2-201ENST00000302190 A0A087WUV0 522 aaPredicted RBP15.27■□□□□ 0.03
SDC2-201ENST00000302190 PVALEFA0A1B0GWK0 134 aa15.27■□□□□ 0.03
SDC2-201ENST00000302190 KIF1CO43896 1103 aaKnown RBP15.27■□□□□ 0.03
SDC2-201ENST00000302190 CLTAP09496 248 aa15.27■□□□□ 0.03
SDC2-201ENST00000302190 TMOD1P28289 359 aa15.27■□□□□ 0.03
SDC2-201ENST00000302190 SBK1Q52WX2 424 aa15.27■□□□□ 0.03
SDC2-201ENST00000302190 TADA2BQ86TJ2 420 aa15.27■□□□□ 0.03
SDC2-201ENST00000302190 HNRNPLLQ8WVV9 542 aaKnown RBP15.27■□□□□ 0.03
SDC2-201ENST00000302190 C7orf25Q9BPX7 421 aa15.27■□□□□ 0.03
SDC2-201ENST00000302190 JPH2Q9BR39 696 aaPredicted RBP15.27■□□□□ 0.03
SDC2-201ENST00000302190 TDRD3Q9H7E2 651 aaKnown RBP15.27■□□□□ 0.03
SDC2-201ENST00000302190 CEP72Q9P209 647 aa15.27■□□□□ 0.03
SDC2-201ENST00000302190 GGT7Q9UJ14 662 aa15.27■□□□□ 0.03
SDC2-201ENST00000302190 RSPH10B2B2RC85 870 aa15.27■□□□□ 0.03
SDC2-201ENST00000302190 RSPH10BP0C881 870 aa15.27■□□□□ 0.03
SDC2-201ENST00000302190 ALAS1P13196 640 aa15.27■□□□□ 0.03
SDC2-201ENST00000302190 PRKG1Q13976 671 aa15.27■□□□□ 0.03
SDC2-201ENST00000302190 ZC2HC1CQ53FD0 456 aaPredicted RBP15.27■□□□□ 0.03
SDC2-201ENST00000302190 EHMT1Q9H9B1 1298 aa15.27■□□□□ 0.03
SDC2-201ENST00000302190 UBE2TQ9NPD8 197 aaPredicted RBP15.27■□□□□ 0.03
SDC2-201ENST00000302190 MTUS1Q9ULD2 1270 aa15.27■□□□□ 0.03
SDC2-201ENST00000302190 PCDHAC2Q9Y5I4 1007 aa15.27■□□□□ 0.03
SDC2-201ENST00000302190 SCN7AQ01118 1682 aa15.26■□□□□ 0.03
SDC2-201ENST00000302190 AKAP11Q9UKA4 1901 aa15.26■□□□□ 0.03
SDC2-201ENST00000302190 NF2P35240 595 aa15.26■□□□□ 0.03
SDC2-201ENST00000302190 ELOA2Q8IYF1 753 aaPredicted RBP15.26■□□□□ 0.03
SDC2-201ENST00000302190 TBC1D16Q8TBP0 767 aa15.26■□□□□ 0.03
SDC2-201ENST00000302190 KCND1Q9NSA2 647 aa15.26■□□□□ 0.03
SDC2-201ENST00000302190 DAGLAQ9Y4D2 1042 aa15.26■□□□□ 0.03
SDC2-201ENST00000302190 CENPFP49454 3210 aa15.26■□□□□ 0.03
SDC2-201ENST00000302190 TESPA1A2RU30 521 aaPredicted RBP15.26■□□□□ 0.03
SDC2-201ENST00000302190 PTK2Q05397 1052 aa15.26■□□□□ 0.03
SDC2-201ENST00000302190 UAP1Q16222 522 aaPredicted RBP15.26■□□□□ 0.03
SDC2-201ENST00000302190 ADAM33Q9BZ11 813 aa15.26■□□□□ 0.03
SDC2-201ENST00000302190 RREB1Q92766 1687 aa15.26■□□□□ 0.03
SDC2-201ENST00000302190 PALM3A6NDB9 673 aaPredicted RBP15.26■□□□□ 0.03
SDC2-201ENST00000302190 NR3C1P04150 777 aa15.26■□□□□ 0.03
SDC2-201ENST00000302190 GLI1P08151 1106 aa15.26■□□□□ 0.03
SDC2-201ENST00000302190 RPSAP08865 295 aaKnown RBP15.26■□□□□ 0.03
SDC2-201ENST00000302190 MYBP10242 640 aa15.26■□□□□ 0.03
SDC2-201ENST00000302190 CETN2P41208 172 aa15.26■□□□□ 0.03
SDC2-201ENST00000302190 CCDC38Q502W7 563 aa15.26■□□□□ 0.03
SDC2-201ENST00000302190 FAM102BQ5T8I3 360 aa15.26■□□□□ 0.03
SDC2-201ENST00000302190 SLFN12Q8IYM2 578 aa15.26■□□□□ 0.03
SDC2-201ENST00000302190 CACNA2D3Q8IZS8 1091 aa15.26■□□□□ 0.03
SDC2-201ENST00000302190 SPZ1Q9BXG8 430 aa15.26■□□□□ 0.03
SDC2-201ENST00000302190 DAAM1Q9Y4D1 1078 aa15.26■□□□□ 0.03
SDC2-201ENST00000302190 SART1O43290 800 aaKnown RBP15.25■□□□□ 0.03
SDC2-201ENST00000302190 RAD51CO43502 376 aa15.25■□□□□ 0.03
SDC2-201ENST00000302190 IFNB1P01574 187 aa15.25■□□□□ 0.03
SDC2-201ENST00000302190 POTEJP0CG39 1038 aa15.25■□□□□ 0.03
SDC2-201ENST00000302190 GCLMP48507 274 aa15.25■□□□□ 0.03
SDC2-201ENST00000302190 MAGOHP61326 146 aaKnown RBP15.25■□□□□ 0.03
SDC2-201ENST00000302190 SYCE1Q8N0S2 351 aa15.25■□□□□ 0.03
SDC2-201ENST00000302190 UBL4BQ8N7F7 174 aa15.25■□□□□ 0.03
SDC2-201ENST00000302190 TCP11Q8WWU5 503 aa15.25■□□□□ 0.03
SDC2-201ENST00000302190 TRIM51Q9BSJ1 452 aa15.25■□□□□ 0.03
SDC2-201ENST00000302190 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.25■□□□□ 0.037e-12■■■□□ 14.7
SDC2-201ENST00000302190 SSTR3P32745 418 aaPredicted RBP15.25■□□□□ 0.03
SDC2-201ENST00000302190 CRY2Q49AN0 593 aa15.25■□□□□ 0.03
SDC2-201ENST00000302190 SPATA20Q8TB22 786 aa15.25■□□□□ 0.03
SDC2-201ENST00000302190 JMJD4Q9H9V9 463 aa15.25■□□□□ 0.03
SDC2-201ENST00000302190 DNAJC12Q9UKB3 198 aa15.25■□□□□ 0.03
SDC2-201ENST00000302190 LAMB2P55268 1798 aa15.25■□□□□ 0.03
SDC2-201ENST00000302190 NKRFO15226 690 aaKnown RBP eCLIP15.25■□□□□ 0.031e-7■□□□□ 10.9
SDC2-201ENST00000302190 TTI1O43156 1089 aa15.25■□□□□ 0.03
SDC2-201ENST00000302190 PRPHP41219 470 aa15.25■□□□□ 0.03
SDC2-201ENST00000302190 NFIAQ12857 509 aa15.25■□□□□ 0.03
SDC2-201ENST00000302190 IQCDQ96DY2 449 aa15.25■□□□□ 0.03
SDC2-201ENST00000302190 PSD3Q9NYI0 1048 aa15.25■□□□□ 0.03
SDC2-201ENST00000302190 FAM153BP0C7A2 387 aa15.24■□□□□ 0.03
SDC2-201ENST00000302190 BCRP11274 1271 aa15.24■□□□□ 0.03
SDC2-201ENST00000302190 DPEP1P16444 411 aa15.24■□□□□ 0.03
SDC2-201ENST00000302190 CASP4P49662 377 aa15.24■□□□□ 0.03
SDC2-201ENST00000302190 ACTN3Q08043 901 aaPredicted RBP15.24■□□□□ 0.03
SDC2-201ENST00000302190 FAM153CQ494X1 144 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms