RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 HS2ST1Q7LGA3 356 aa10.95□□□□□ -0.66
TNFRSF11B-201ENST00000297350 FAM160B2Q86V87 743 aa10.95□□□□□ -0.66
TNFRSF11B-201ENST00000297350 SLC35C1Q96A29 364 aa10.95□□□□□ -0.66
TNFRSF11B-201ENST00000297350 NACC1Q96RE7 527 aa10.95□□□□□ -0.66
TNFRSF11B-201ENST00000297350 BHMT2Q9H2M3 363 aa10.95□□□□□ -0.66
TNFRSF11B-201ENST00000297350 DBNDD1Q9H9R9 158 aa10.95□□□□□ -0.66
TNFRSF11B-201ENST00000297350 RBM12Q9NTZ6 932 aaKnown RBP10.95□□□□□ -0.66
TNFRSF11B-201ENST00000297350 GOLGA6AQ9NYA3 693 aa10.95□□□□□ -0.66
TNFRSF11B-201ENST00000297350 PRR12Q9ULL5 1215 aa10.95□□□□□ -0.66
TNFRSF11B-201ENST00000297350 MRPL11Q9Y3B7 192 aaKnown RBP10.95□□□□□ -0.66
TNFRSF11B-201ENST00000297350 CCDC188H7C350 402 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 GCOM1H8Y6P7 765 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 RAD21O60216 631 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 PPFIA4O75335 1185 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 POLR2MP0CAP2 368 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 MYBL2P10244 700 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 HOXD13P35453 343 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 STAT1P42224 750 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 PRELPP51888 382 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 EN1Q05925 392 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 TCP10Q12799 353 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 CUL1Q13616 776 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 PPP2R5EQ16537 467 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 FKBP1CQ5VVH2 108 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 SLC9A9Q8IVB4 645 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 CD302Q8IX05 232 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 GJA10Q969M2 543 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 PARVGQ9HBI0 331 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 ADAMTS1Q9UHI8 967 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 DMGDHQ9UI17 866 aaKnown RBP10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 NAGPAQ9UK23 515 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 TMEM59LQ9UK28 342 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 SHTN1A0MZ66 631 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 AGPSO00116 658 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 OPLAHO14841 1288 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 BUB1O43683 1085 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 PSMD10O75832 226 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 GCNT3O95395 438 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 MAPTP10636 758 aaKnown RBP10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 LMNB1P20700 586 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 BAG6P46379 1132 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 CASP5P51878 434 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 GYS2P54840 703 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 PTK2Q05397 1052 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 RINT1Q6NUQ1 792 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 C1orf186Q6ZWK4 172 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 OTOP1Q7RTM1 612 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 USP38Q8NB14 1042 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 C7orf43Q8WVR3 580 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 BORCS6Q96GS4 357 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 RANBP17Q9H2T7 1088 aaKnown RBP10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 SUCLA2Q9P2R7 463 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 TMX2Q9Y320 296 aa10.94□□□□□ -0.66
TNFRSF11B-201ENST00000297350 NCANO14594 1321 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 BRCA1P38398 1863 aaKnown RBP10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 NCK2O43639 380 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 AKAP3O75969 853 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 KIF4AO95239 1232 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 GH2P01242 217 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 H2AFZP0C0S5 128 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 MYBP10242 640 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 GUCY2CP25092 1073 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 SNRPFP62306 86 aaKnown RBP10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 PSMC6P62333 389 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 USH1GQ495M9 461 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 LRCH2Q5VUJ6 765 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 ALKBH5Q6P6C2 394 aaKnown RBP10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 H2AFVQ71UI9 128 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 NIPA1Q7RTP0 329 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 SLFN11Q7Z7L1 901 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 FAM186BQ8IYM0 893 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 SAMD3Q8N6K7 520 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 ANKRD13CQ8N6S4 541 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 LRRC57Q8N9N7 239 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 P2RX7Q99572 595 aaKnown RBP10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 RIT2Q99578 217 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 RUSC1Q9BVN2 902 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 GCNT4Q9P109 453 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 PCDHB13Q9Y5F0 798 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 VIL1P09327 827 aaKnown RBP10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 BCRP11274 1271 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 CACNB1Q02641 598 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 SLC20A2Q08357 652 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 RAD51AP2Q09MP3 1159 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 EMC10Q5UCC4 262 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 ZNF571Q7Z3V5 609 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 SLC16A10Q8TF71 515 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 ZNF622Q969S3 477 aaKnown RBP eCLIP10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 CSRNP1Q96S65 589 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 TIPINQ9BVW5 301 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 STK33Q9BYT3 514 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 SIX2Q9NPC8 291 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 PNMA2Q9UL42 364 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 TTC7AQ9ULT0 858 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 FRMD4BQ9Y2L6 1034 aa10.93□□□□□ -0.66
TNFRSF11B-201ENST00000297350 SRRM3A6NNA2 597 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 PGRMC1O00264 195 aaKnown RBP10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 P4HA2O15460 535 aa10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 TBC1D12O60347 775 aa10.92□□□□□ -0.66
TNFRSF11B-201ENST00000297350 HEXIM1O94992 359 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms